RNA–Protein interactions for RNA: ENST00000575570.1

TBC1D28-208, Transcript of TBC1 domain family member 28, humanhuman

TSL 5

Gene TBC1D28, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28-208ENST00000575570 NLGN1Q8N2Q7 840 aa12.55□□□□□ -0.4
TBC1D28-208ENST00000575570 BABAM1Q9NWV8 329 aa12.55□□□□□ -0.4
TBC1D28-208ENST00000575570 SOS1Q07889 1333 aaPredicted RBP12.55□□□□□ -0.4
TBC1D28-208ENST00000575570 SNRPA1P09661 255 aaKnown RBP12.54□□□□□ -0.4
TBC1D28-208ENST00000575570 GYS1P13807 737 aa12.54□□□□□ -0.4
TBC1D28-208ENST00000575570 ZBTB1Q9Y2K1 713 aa12.54□□□□□ -0.4
TBC1D28-208ENST00000575570 USP42Q9H9J4 1324 aaKnown RBP12.54□□□□□ -0.4
TBC1D28-208ENST00000575570 EIF5P55010 431 aaKnown RBP12.53□□□□□ -0.4
TBC1D28-208ENST00000575570 CCDC146Q8IYE0 955 aa12.53□□□□□ -0.4
TBC1D28-208ENST00000575570 COL15A1P39059 1388 aa12.53□□□□□ -0.4
TBC1D28-208ENST00000575570 IL6STP40189 918 aaPredicted RBP12.52□□□□□ -0.41
TBC1D28-208ENST00000575570 CCDC184Q52MB2 194 aa12.52□□□□□ -0.41
TBC1D28-208ENST00000575570 THUMPD2Q9BTF0 503 aaKnown RBP12.52□□□□□ -0.41
TBC1D28-208ENST00000575570 NARFQ9UHQ1 456 aa12.52□□□□□ -0.41
TBC1D28-208ENST00000575570 CD2APQ9Y5K6 639 aa12.52□□□□□ -0.41
TBC1D28-208ENST00000575570 LAMB4A4D0S4 1761 aa12.51□□□□□ -0.41
TBC1D28-208ENST00000575570 KIF13BQ9NQT8 1826 aa12.51□□□□□ -0.41
TBC1D28-208ENST00000575570 A0A087WZG4 1122 aa12.51□□□□□ -0.41
TBC1D28-208ENST00000575570 MMP10P09238 476 aa12.51□□□□□ -0.41
TBC1D28-208ENST00000575570 EIF4A1P60842 406 aaKnown RBP12.51□□□□□ -0.41
TBC1D28-208ENST00000575570 MIS18AQ9NYP9 233 aa12.51□□□□□ -0.41
TBC1D28-208ENST00000575570 TRIM35Q9UPQ4 493 aa12.51□□□□□ -0.41
TBC1D28-208ENST00000575570 USP16Q9Y5T5 823 aa12.51□□□□□ -0.41
TBC1D28-208ENST00000575570 DCAF8L1A6NGE4 600 aa12.5□□□□□ -0.41
TBC1D28-208ENST00000575570 ZPR1O75312 459 aa12.5□□□□□ -0.41
TBC1D28-208ENST00000575570 CANXP27824 592 aaKnown RBP12.5□□□□□ -0.41
TBC1D28-208ENST00000575570 RRP7AQ9Y3A4 280 aaKnown RBP12.5□□□□□ -0.41
TBC1D28-208ENST00000575570 GIGYF1O75420 1035 aaPredicted RBP12.49□□□□□ -0.41
TBC1D28-208ENST00000575570 A1BGP04217 495 aa12.49□□□□□ -0.41
TBC1D28-208ENST00000575570 TM4SF1P30408 202 aa12.49□□□□□ -0.41
TBC1D28-208ENST00000575570 NEUROD2Q15784 382 aa12.49□□□□□ -0.41
TBC1D28-208ENST00000575570 NCBP3Q53F19 620 aaKnown RBP12.49□□□□□ -0.41
TBC1D28-208ENST00000575570 USPL1Q5W0Q7 1092 aa12.49□□□□□ -0.41
TBC1D28-208ENST00000575570 MRS2Q9HD23 443 aa12.49□□□□□ -0.41
TBC1D28-208ENST00000575570 SRP68Q9UHB9 627 aaKnown RBP12.49□□□□□ -0.41
TBC1D28-208ENST00000575570 PRAMEF22A3QJZ6 481 aa12.48□□□□□ -0.41
TBC1D28-208ENST00000575570 CHL1O00533 1208 aa12.48□□□□□ -0.41
TBC1D28-208ENST00000575570 APAF1O14727 1248 aa12.48□□□□□ -0.41
TBC1D28-208ENST00000575570 FKBP8Q14318 412 aa12.48□□□□□ -0.41
TBC1D28-208ENST00000575570 TSPYL4Q9UJ04 414 aa12.48□□□□□ -0.41
TBC1D28-208ENST00000575570 RGL2O15211 777 aa12.47□□□□□ -0.41
TBC1D28-208ENST00000575570 NPM2Q86SE8 214 aaKnown RBP12.47□□□□□ -0.41
TBC1D28-208ENST00000575570 KLHL34Q8N239 644 aa12.47□□□□□ -0.41
TBC1D28-208ENST00000575570 NLGN2Q8NFZ4 835 aa12.47□□□□□ -0.41
TBC1D28-208ENST00000575570 BCL2L12Q9HB09 334 aa12.47□□□□□ -0.41
TBC1D28-208ENST00000575570 PARP3Q9Y6F1 533 aa12.47□□□□□ -0.41
TBC1D28-208ENST00000575570 SCN7AQ01118 1682 aa12.47□□□□□ -0.41
TBC1D28-208ENST00000575570 C10orf71Q711Q0 1435 aa12.46□□□□□ -0.41
TBC1D28-208ENST00000575570 BCORQ6W2J9 1755 aa12.46□□□□□ -0.41
TBC1D28-208ENST00000575570 NRXN2Q9P2S2 1712 aa12.46□□□□□ -0.41
TBC1D28-208ENST00000575570 ERBB4Q15303 1308 aa12.46□□□□□ -0.41
TBC1D28-208ENST00000575570 CCDC27Q2M243 656 aa12.46□□□□□ -0.41
TBC1D28-208ENST00000575570 CFAP44Q96MT7 982 aa12.46□□□□□ -0.41
TBC1D28-208ENST00000575570 AFDNP55196 1824 aaKnown RBP12.46□□□□□ -0.42
TBC1D28-208ENST00000575570 NBPF26B4DH59 902 aa12.45□□□□□ -0.42
TBC1D28-208ENST00000575570 POLRMTO00411 1230 aaKnown RBP12.45□□□□□ -0.42
TBC1D28-208ENST00000575570 TGFB2P61812 414 aa12.45□□□□□ -0.42
TBC1D28-208ENST00000575570 CALD1Q05682 793 aaKnown RBP12.45□□□□□ -0.42
TBC1D28-208ENST00000575570 DDR1Q08345 913 aa12.45□□□□□ -0.42
TBC1D28-208ENST00000575570 NBPF10Q6P3W6 841 aaKnown RBP12.45□□□□□ -0.42
TBC1D28-208ENST00000575570 CLEC4GQ6UXB4 293 aa12.45□□□□□ -0.42
TBC1D28-208ENST00000575570 NBPF15Q8N660 670 aa12.45□□□□□ -0.42
TBC1D28-208ENST00000575570 TBC1D2BQ9UPU7 963 aa12.45□□□□□ -0.42
TBC1D28-208ENST00000575570 CHD4Q14839 1912 aa12.45□□□□□ -0.42
TBC1D28-208ENST00000575570 CAMTA2O94983 1202 aa12.44□□□□□ -0.42
TBC1D28-208ENST00000575570 ZNF853P0CG23 659 aa12.44□□□□□ -0.42
TBC1D28-208ENST00000575570 NFIXQ14938 502 aa12.44□□□□□ -0.42
TBC1D28-208ENST00000575570 DZIP3Q86Y13 1208 aaKnown RBP12.44□□□□□ -0.42
TBC1D28-208ENST00000575570 KIAA1551Q9HCM1 1747 aa12.44□□□□□ -0.42
TBC1D28-208ENST00000575570 GOLGB1Q14789 3259 aaKnown RBP12.43□□□□□ -0.42
TBC1D28-208ENST00000575570 HOXB7P09629 217 aa12.43□□□□□ -0.42
TBC1D28-208ENST00000575570 IFT57Q9NWB7 429 aa12.43□□□□□ -0.42
TBC1D28-208ENST00000575570 ZNF330Q9Y3S2 320 aaPredicted RBP12.43□□□□□ -0.42
TBC1D28-208ENST00000575570 PXDNLA1KZ92 1463 aa12.42□□□□□ -0.42
TBC1D28-208ENST00000575570 PIP4K2AP48426 406 aaPredicted RBP12.42□□□□□ -0.42
TBC1D28-208ENST00000575570 GNAI1P63096 354 aa12.42□□□□□ -0.42
TBC1D28-208ENST00000575570 GPR162Q16538 588 aa12.42□□□□□ -0.42
TBC1D28-208ENST00000575570 BRCA1P38398 1863 aaKnown RBP12.42□□□□□ -0.42
TBC1D28-208ENST00000575570 N4BP2Q86UW6 1770 aaPredicted RBP12.41□□□□□ -0.42
TBC1D28-208ENST00000575570 GRIN3BO60391 1043 aa12.41□□□□□ -0.42
TBC1D28-208ENST00000575570 SERPINB2P05120 415 aa12.41□□□□□ -0.42
TBC1D28-208ENST00000575570 TBC1D9BQ66K14 1250 aa12.41□□□□□ -0.42
TBC1D28-208ENST00000575570 NGEFQ8N5V2 710 aa12.41□□□□□ -0.42
TBC1D28-208ENST00000575570 ZNF652Q9Y2D9 606 aa12.41□□□□□ -0.42
TBC1D28-208ENST00000575570 LAS1LQ9Y4W2 734 aaKnown RBP12.41□□□□□ -0.42
TBC1D28-208ENST00000575570 NUP98P52948 1817 aa12.41□□□□□ -0.42
TBC1D28-208ENST00000575570 UTRNP46939 3433 aa12.4□□□□□ -0.42
TBC1D28-208ENST00000575570 ERVV-1B6SEH8 477 aa12.4□□□□□ -0.42
TBC1D28-208ENST00000575570 PDIA6Q15084 440 aa12.4□□□□□ -0.42
TBC1D28-208ENST00000575570 LRP10Q7Z4F1 713 aa12.4□□□□□ -0.42
TBC1D28-208ENST00000575570 WWC1Q8IX03 1113 aa12.4□□□□□ -0.42
TBC1D28-208ENST00000575570 MBIPQ9NS73 344 aa12.4□□□□□ -0.42
TBC1D28-208ENST00000575570 CARMIL3Q8ND23 1372 aa12.4□□□□□ -0.42
TBC1D28-208ENST00000575570 YBX3P16989 372 aaKnown RBP eCLIP12.39□□□□□ -0.43
TBC1D28-208ENST00000575570 KCNA3P22001 575 aa12.39□□□□□ -0.43
TBC1D28-208ENST00000575570 SETDB2Q96T68 719 aa12.39□□□□□ -0.43
TBC1D28-208ENST00000575570 IL16Q14005 1332 aa12.38□□□□□ -0.43
TBC1D28-208ENST00000575570 MAP3K15Q6ZN16 1313 aa12.38□□□□□ -0.43
TBC1D28-208ENST00000575570 MYL6BP14649 208 aa12.38□□□□□ -0.43
TBC1D28-208ENST00000575570 EIF2S2P20042 333 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms