RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 NBPF4Q96M43 638 aa10.29□□□□□ -0.76
RPAIN-215ENST00000575112 PPLO60437 1756 aa10.29□□□□□ -0.76
RPAIN-215ENST00000575112 ARHGEF28Q8N1W1 1705 aaKnown RBP10.28□□□□□ -0.76
RPAIN-215ENST00000575112 CHL1O00533 1208 aa10.28□□□□□ -0.76
RPAIN-215ENST00000575112 CCT4P50991 539 aaKnown RBP10.28□□□□□ -0.76
RPAIN-215ENST00000575112 NUCB2P80303 420 aa10.28□□□□□ -0.76
RPAIN-215ENST00000575112 GOLGA6L4A6NEF3 574 aa10.28□□□□□ -0.76
RPAIN-215ENST00000575112 G3BP1Q13283 466 aaKnown RBP eCLIP10.28□□□□□ -0.76
RPAIN-215ENST00000575112 IBTKQ9P2D0 1353 aaPredicted RBP10.28□□□□□ -0.76
RPAIN-215ENST00000575112 SPDYE4A6NLX3 237 aa10.28□□□□□ -0.76
RPAIN-215ENST00000575112 AEBP2Q6ZN18 517 aaPredicted RBP10.28□□□□□ -0.76
RPAIN-215ENST00000575112 ATP10DQ9P241 1426 aa10.27□□□□□ -0.77
RPAIN-215ENST00000575112 HSPA2P54652 639 aa10.27□□□□□ -0.77
RPAIN-215ENST00000575112 GORABQ5T7V8 394 aa10.27□□□□□ -0.77
RPAIN-215ENST00000575112 TTC5Q8N0Z6 440 aa10.27□□□□□ -0.77
RPAIN-215ENST00000575112 CLASRPQ8N2M8 674 aaKnown RBP10.27□□□□□ -0.77
RPAIN-215ENST00000575112 MAP3K2Q9Y2U5 619 aa10.27□□□□□ -0.77
RPAIN-215ENST00000575112 AP5Z1O43299 807 aa10.27□□□□□ -0.77
RPAIN-215ENST00000575112 NECAB1Q8N987 351 aa10.27□□□□□ -0.77
RPAIN-215ENST00000575112 PTCH1Q13635 1447 aa10.27□□□□□ -0.77
RPAIN-215ENST00000575112 HOXC9P31274 260 aa10.26□□□□□ -0.77
RPAIN-215ENST00000575112 ATP2B3Q16720 1220 aa10.26□□□□□ -0.77
RPAIN-215ENST00000575112 PRPF40BQ6NWY9 871 aaKnown RBP10.26□□□□□ -0.77
RPAIN-215ENST00000575112 ANKLE2Q86XL3 938 aa10.26□□□□□ -0.77
RPAIN-215ENST00000575112 EDC3Q96F86 508 aaKnown RBP10.26□□□□□ -0.77
RPAIN-215ENST00000575112 FSD1Q9BTV5 496 aa10.26□□□□□ -0.77
RPAIN-215ENST00000575112 FAM135BQ49AJ0 1406 aa10.26□□□□□ -0.77
RPAIN-215ENST00000575112 MAP2P11137 1827 aaKnown RBP10.26□□□□□ -0.77
RPAIN-215ENST00000575112 ABCC3O15438 1527 aa10.26□□□□□ -0.77
RPAIN-215ENST00000575112 USP32Q8NFA0 1604 aa10.26□□□□□ -0.77
RPAIN-215ENST00000575112 ZNF853P0CG23 659 aa10.26□□□□□ -0.77
RPAIN-215ENST00000575112 HCLS1P14317 486 aaPredicted RBP10.26□□□□□ -0.77
RPAIN-215ENST00000575112 CCDC83Q8IWF9 413 aa10.26□□□□□ -0.77
RPAIN-215ENST00000575112 LRRC2Q9BYS8 371 aa10.26□□□□□ -0.77
RPAIN-215ENST00000575112 SIGLEC1Q9BZZ2 1709 aa10.26□□□□□ -0.77
RPAIN-215ENST00000575112 SETBP1Q9Y6X0 1596 aa10.25□□□□□ -0.77
RPAIN-215ENST00000575112 PLEKHO1Q53GL0 409 aaPredicted RBP10.25□□□□□ -0.77
RPAIN-215ENST00000575112 USP48Q86UV5 1035 aa10.25□□□□□ -0.77
RPAIN-215ENST00000575112 RAB11FIP4Q86YS3 637 aa10.25□□□□□ -0.77
RPAIN-215ENST00000575112 KIDINS220Q9ULH0 1771 aa10.25□□□□□ -0.77
RPAIN-215ENST00000575112 DLG5Q8TDM6 1919 aa10.25□□□□□ -0.77
RPAIN-215ENST00000575112 COL9A3Q14050 684 aaPredicted RBP10.25□□□□□ -0.77
RPAIN-215ENST00000575112 PROSER3Q2NL68 480 aa10.25□□□□□ -0.77
RPAIN-215ENST00000575112 JAKMIP1Q96N16 626 aaKnown RBP10.25□□□□□ -0.77
RPAIN-215ENST00000575112 CASTP20810 708 aaKnown RBP10.25□□□□□ -0.77
RPAIN-215ENST00000575112 MYD88Q99836 296 aa10.25□□□□□ -0.77
RPAIN-215ENST00000575112 PNPLA6Q8IY17 1366 aa10.25□□□□□ -0.77
RPAIN-215ENST00000575112 PIK3R4Q99570 1358 aa10.25□□□□□ -0.77
RPAIN-215ENST00000575112 FAM173BQ6P4H8 233 aa10.24□□□□□ -0.77
RPAIN-215ENST00000575112 NFATC2IPQ8NCF5 419 aa10.24□□□□□ -0.77
RPAIN-215ENST00000575112 DNAAF4Q8WXU2 420 aa10.24□□□□□ -0.77
RPAIN-215ENST00000575112 ARHGAP45Q92619 1136 aa10.24□□□□□ -0.77
RPAIN-215ENST00000575112 DDX11Q96FC9 970 aa10.24□□□□□ -0.77
RPAIN-215ENST00000575112 SMC3Q9UQE7 1217 aa10.24□□□□□ -0.77
RPAIN-215ENST00000575112 CNPY2Q9Y2B0 182 aa10.24□□□□□ -0.77
RPAIN-215ENST00000575112 ARHGEF40Q8TER5 1519 aa10.24□□□□□ -0.77
RPAIN-215ENST00000575112 ATF3P18847 181 aa10.24□□□□□ -0.77
RPAIN-215ENST00000575112 NEXNQ0ZGT2 675 aa10.24□□□□□ -0.77
RPAIN-215ENST00000575112 TAF7LQ5H9L4 462 aa10.24□□□□□ -0.77
RPAIN-215ENST00000575112 DRC7Q8IY82 874 aa10.24□□□□□ -0.77
RPAIN-215ENST00000575112 EVA1CP58658 441 aa10.24□□□□□ -0.77
RPAIN-215ENST00000575112 ANKRD24Q8TF21 1146 aa10.24□□□□□ -0.77
RPAIN-215ENST00000575112 RGS12O14924 1447 aa10.24□□□□□ -0.77
RPAIN-215ENST00000575112 RTL1A6NKG5 1358 aa10.23□□□□□ -0.77
RPAIN-215ENST00000575112 BRD1O95696 1058 aa10.23□□□□□ -0.77
RPAIN-215ENST00000575112 SASS6Q6UVJ0 657 aa10.23□□□□□ -0.77
RPAIN-215ENST00000575112 SPC24Q8NBT2 197 aa10.23□□□□□ -0.77
RPAIN-215ENST00000575112 SNRKQ9NRH2 765 aa10.23□□□□□ -0.77
RPAIN-215ENST00000575112 RHPN1Q8TCX5 695 aa10.23□□□□□ -0.77
RPAIN-215ENST00000575112 ZBTB3Q9H5J0 574 aa10.23□□□□□ -0.77
RPAIN-215ENST00000575112 ZSCAN20P17040 1043 aaPredicted RBP10.23□□□□□ -0.77
RPAIN-215ENST00000575112 BRPF1P55201 1214 aaPredicted RBP10.23□□□□□ -0.77
RPAIN-215ENST00000575112 NAA30Q147X3 362 aaPredicted RBP10.23□□□□□ -0.77
RPAIN-215ENST00000575112 TSPY26PQ9H489 355 aa10.23□□□□□ -0.77
RPAIN-215ENST00000575112 TFIP11Q9UBB9 837 aaKnown RBP10.23□□□□□ -0.77
RPAIN-215ENST00000575112 MYO5BQ9ULV0 1848 aa10.23□□□□□ -0.77
RPAIN-215ENST00000575112 ADCY5O95622 1261 aa10.22□□□□□ -0.77
RPAIN-215ENST00000575112 PTMSP20962 102 aa10.22□□□□□ -0.77
RPAIN-215ENST00000575112 CAMK4Q16566 473 aa10.22□□□□□ -0.77
RPAIN-215ENST00000575112 GIMAP6Q6P9H5 292 aa10.22□□□□□ -0.77
RPAIN-215ENST00000575112 PUS7Q96PZ0 661 aaKnown RBP10.22□□□□□ -0.77
RPAIN-215ENST00000575112 USP44Q9H0E7 712 aa10.22□□□□□ -0.77
RPAIN-215ENST00000575112 MLH3Q9UHC1 1453 aa10.22□□□□□ -0.77
RPAIN-215ENST00000575112 UBE3BQ7Z3V4 1068 aa10.22□□□□□ -0.77
RPAIN-215ENST00000575112 KRT28Q7Z3Y7 464 aa10.22□□□□□ -0.77
RPAIN-215ENST00000575112 CCDC39Q9UFE4 941 aa10.22□□□□□ -0.77
RPAIN-215ENST00000575112 GCP02774 474 aa10.22□□□□□ -0.77
RPAIN-215ENST00000575112 HSP90AB3PQ58FF7 597 aa10.22□□□□□ -0.77
RPAIN-215ENST00000575112 TOMM22Q9NS69 142 aa10.22□□□□□ -0.77
RPAIN-215ENST00000575112 PYCARDQ9ULZ3 195 aa10.22□□□□□ -0.77
RPAIN-215ENST00000575112 DYNC1I1O14576 645 aa10.21□□□□□ -0.77
RPAIN-215ENST00000575112 GUCY1B3Q02153 619 aa10.21□□□□□ -0.77
RPAIN-215ENST00000575112 HS1BP3Q53T59 392 aa10.21□□□□□ -0.77
RPAIN-215ENST00000575112 TOM1L2Q6ZVM7 507 aa10.21□□□□□ -0.77
RPAIN-215ENST00000575112 COPS6Q7L5N1 327 aa10.21□□□□□ -0.77
RPAIN-215ENST00000575112 CNTROBQ8N137 903 aa10.21□□□□□ -0.77
RPAIN-215ENST00000575112 PODXL2Q9NZ53 605 aa10.21□□□□□ -0.77
RPAIN-215ENST00000575112 KIAA2012Q0VF49 1180 aa10.21□□□□□ -0.77
RPAIN-215ENST00000575112 NOLC1Q14978 699 aaKnown RBP eCLIP10.21□□□□□ -0.77
RPAIN-215ENST00000575112 NCBP3Q53F19 620 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms