RNA–Protein interactions for RNA: ENST00000574894.1

NOMO3-212, Transcript of NODAL modulator 3, humanhuman

TSL 2

Gene NOMO3, Length 1,269 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOMO3-212ENST00000574894 C4AP0C0L4 1744 aa19.68■□□□□ 0.74
NOMO3-212ENST00000574894 TAF7Q15545 349 aaPredicted RBP19.67■□□□□ 0.74
NOMO3-212ENST00000574894 COL15A1P39059 1388 aa19.67■□□□□ 0.74
NOMO3-212ENST00000574894 NPM2Q86SE8 214 aaKnown RBP19.66■□□□□ 0.74
NOMO3-212ENST00000574894 PRKRIP1Q9H875 184 aaPredicted RBP19.66■□□□□ 0.74
NOMO3-212ENST00000574894 ZBTB1Q9Y2K1 713 aa19.66■□□□□ 0.74
NOMO3-212ENST00000574894 LMOD3Q0VAK6 560 aa19.65■□□□□ 0.74
NOMO3-212ENST00000574894 WDR43Q15061 677 aaKnown RBP eCLIP19.65■□□□□ 0.74
NOMO3-212ENST00000574894 NARFQ9UHQ1 456 aa19.65■□□□□ 0.74
NOMO3-212ENST00000574894 TGFB2P61812 414 aa19.64■□□□□ 0.73
NOMO3-212ENST00000574894 SNRPA1P09661 255 aaKnown RBP19.63■□□□□ 0.73
NOMO3-212ENST00000574894 IL6STP40189 918 aaPredicted RBP19.63■□□□□ 0.73
NOMO3-212ENST00000574894 PELP1Q8IZL8 1130 aaKnown RBP19.63■□□□□ 0.73
NOMO3-212ENST00000574894 CANXP27824 592 aaKnown RBP19.62■□□□□ 0.73
NOMO3-212ENST00000574894 EIF5P55010 431 aaKnown RBP19.62■□□□□ 0.73
NOMO3-212ENST00000574894 DCTN1Q14203 1278 aa19.62■□□□□ 0.73
NOMO3-212ENST00000574894 SRP68Q9UHB9 627 aaKnown RBP19.62■□□□□ 0.73
NOMO3-212ENST00000574894 C10orf71Q711Q0 1435 aa19.61■□□□□ 0.73
NOMO3-212ENST00000574894 FKBP8Q14318 412 aa19.61■□□□□ 0.73
NOMO3-212ENST00000574894 USPL1Q5W0Q7 1092 aa19.61■□□□□ 0.73
NOMO3-212ENST00000574894 BABAM1Q9NWV8 329 aa19.6■□□□□ 0.73
NOMO3-212ENST00000574894 DLG5Q8TDM6 1919 aa19.6■□□□□ 0.73
NOMO3-212ENST00000574894 KIF13BQ9NQT8 1826 aa19.6■□□□□ 0.73
NOMO3-212ENST00000574894 ZNF316A6NFI3 1004 aaPredicted RBP19.59■□□□□ 0.73
NOMO3-212ENST00000574894 KCNQ3O43525 872 aa19.59■□□□□ 0.73
NOMO3-212ENST00000574894 RIPK4P57078 832 aa19.59■□□□□ 0.73
NOMO3-212ENST00000574894 RUNDC1Q96C34 613 aa19.59■□□□□ 0.73
NOMO3-212ENST00000574894 CHD4Q14839 1912 aa19.59■□□□□ 0.73
NOMO3-212ENST00000574894 TM4SF1P30408 202 aa19.58■□□□□ 0.72
NOMO3-212ENST00000574894 TMPOP42166 694 aaKnown RBP19.57■□□□□ 0.72
NOMO3-212ENST00000574894 POLRMTO00411 1230 aaKnown RBP19.56■□□□□ 0.72
NOMO3-212ENST00000574894 RGL2O15211 777 aa19.56■□□□□ 0.72
NOMO3-212ENST00000574894 YBX3P16989 372 aaKnown RBP eCLIP19.56■□□□□ 0.72
NOMO3-212ENST00000574894 PXDNLA1KZ92 1463 aa19.55■□□□□ 0.72
NOMO3-212ENST00000574894 DDR1Q08345 913 aa19.55■□□□□ 0.72
NOMO3-212ENST00000574894 ZNF330Q9Y3S2 320 aaPredicted RBP19.55■□□□□ 0.72
NOMO3-212ENST00000574894 USP16Q9Y5T5 823 aa19.55■□□□□ 0.72
NOMO3-212ENST00000574894 KDM3BQ7LBC6 1761 aa19.55■□□□□ 0.72
NOMO3-212ENST00000574894 A1BGP04217 495 aa19.54■□□□□ 0.72
NOMO3-212ENST00000574894 NFIXQ14938 502 aa19.54■□□□□ 0.72
NOMO3-212ENST00000574894 BCL2L12Q9HB09 334 aa19.53■□□□□ 0.72
NOMO3-212ENST00000574894 TSPYL4Q9UJ04 414 aa19.53■□□□□ 0.72
NOMO3-212ENST00000574894 ADAMTS8Q9UP79 889 aa19.53■□□□□ 0.72
NOMO3-212ENST00000574894 ZNF652Q9Y2D9 606 aa19.53■□□□□ 0.72
NOMO3-212ENST00000574894 SCN7AQ01118 1682 aa19.52■□□□□ 0.72
NOMO3-212ENST00000574894 EIF4A1P60842 406 aaKnown RBP19.52■□□□□ 0.72
NOMO3-212ENST00000574894 CLEC4GQ6UXB4 293 aa19.52■□□□□ 0.72
NOMO3-212ENST00000574894 MIS18AQ9NYP9 233 aa19.52■□□□□ 0.72
NOMO3-212ENST00000574894 LAMB4A4D0S4 1761 aa19.52■□□□□ 0.71
NOMO3-212ENST00000574894 GIGYF1O75420 1035 aaPredicted RBP19.51■□□□□ 0.71
NOMO3-212ENST00000574894 SERPINB2P05120 415 aa19.51■□□□□ 0.71
NOMO3-212ENST00000574894 DZIP3Q86Y13 1208 aaKnown RBP19.51■□□□□ 0.71
NOMO3-212ENST00000574894 CCDC146Q8IYE0 955 aa19.51■□□□□ 0.71
NOMO3-212ENST00000574894 THUMPD2Q9BTF0 503 aaKnown RBP19.51■□□□□ 0.71
NOMO3-212ENST00000574894 PDZRN3Q9UPQ7 1066 aa19.51■□□□□ 0.71
NOMO3-212ENST00000574894 TBC1D2BQ9UPU7 963 aa19.51■□□□□ 0.71
NOMO3-212ENST00000574894 ERBB4Q15303 1308 aa19.51■□□□□ 0.71
NOMO3-212ENST00000574894 CARMIL3Q8ND23 1372 aa19.5■□□□□ 0.71
NOMO3-212ENST00000574894 DPEP1P16444 411 aa19.5■□□□□ 0.71
NOMO3-212ENST00000574894 PIM2Q9P1W9 311 aa19.5■□□□□ 0.71
NOMO3-212ENST00000574894 KIAA1551Q9HCM1 1747 aa19.49■□□□□ 0.71
NOMO3-212ENST00000574894 NRXN2Q9P2S2 1712 aa19.49■□□□□ 0.71
NOMO3-212ENST00000574894 A0A0G2JLW4 131 aa19.49■□□□□ 0.71
NOMO3-212ENST00000574894 PRAMEF22A3QJZ6 481 aa19.49■□□□□ 0.71
NOMO3-212ENST00000574894 ANP32CO43423 234 aa19.49■□□□□ 0.71
NOMO3-212ENST00000574894 CAMTA2O94983 1202 aa19.49■□□□□ 0.71
NOMO3-212ENST00000574894 SETDB2Q96T68 719 aa19.49■□□□□ 0.71
NOMO3-212ENST00000574894 BCS1LQ9Y276 419 aa19.48■□□□□ 0.71
NOMO3-212ENST00000574894 CALD1Q05682 793 aaKnown RBP19.47■□□□□ 0.71
NOMO3-212ENST00000574894 NEUROD2Q15784 382 aa19.47■□□□□ 0.71
NOMO3-212ENST00000574894 TBC1D9BQ66K14 1250 aa19.47■□□□□ 0.71
NOMO3-212ENST00000574894 ZNF784Q8NCA9 323 aaPredicted RBP19.47■□□□□ 0.71
NOMO3-212ENST00000574894 RRP7AQ9Y3A4 280 aaKnown RBP19.47■□□□□ 0.71
NOMO3-212ENST00000574894 BCORQ6W2J9 1755 aa19.47■□□□□ 0.71
NOMO3-212ENST00000574894 N4BP2Q86UW6 1770 aaPredicted RBP19.47■□□□□ 0.71
NOMO3-212ENST00000574894 NBPF26B4DH59 902 aa19.46■□□□□ 0.71
NOMO3-212ENST00000574894 DALRD3Q5D0E6 543 aaKnown RBP19.46■□□□□ 0.71
NOMO3-212ENST00000574894 NBPF10Q6P3W6 841 aaKnown RBP19.46■□□□□ 0.71
NOMO3-212ENST00000574894 BICDL1Q6ZP65 573 aa19.46■□□□□ 0.71
NOMO3-212ENST00000574894 NBPF15Q8N660 670 aa19.46■□□□□ 0.71
NOMO3-212ENST00000574894 UTRNP46939 3433 aa19.46■□□□□ 0.71
NOMO3-212ENST00000574894 TRIM35Q9UPQ4 493 aa19.45■□□□□ 0.7
NOMO3-212ENST00000574894 AFDNP55196 1824 aaKnown RBP19.44■□□□□ 0.7
NOMO3-212ENST00000574894 NPHP1O15259 732 aa19.44■□□□□ 0.7
NOMO3-212ENST00000574894 KCNA3P22001 575 aa19.44■□□□□ 0.7
NOMO3-212ENST00000574894 PDE6BP35913 854 aa19.44■□□□□ 0.7
NOMO3-212ENST00000574894 ST5P78524 1137 aa19.44■□□□□ 0.7
NOMO3-212ENST00000574894 KIF6Q6ZMV9 814 aa19.44■□□□□ 0.7
NOMO3-212ENST00000574894 BRIP1Q9BX63 1249 aa19.44■□□□□ 0.7
NOMO3-212ENST00000574894 BRCA1P38398 1863 aaKnown RBP19.43■□□□□ 0.7
NOMO3-212ENST00000574894 ERVV-1B6SEH8 477 aa19.43■□□□□ 0.7
NOMO3-212ENST00000574894 H0YIN7 160 aa19.43■□□□□ 0.7
NOMO3-212ENST00000574894 CHL1O00533 1208 aa19.43■□□□□ 0.7
NOMO3-212ENST00000574894 PIP4K2AP48426 406 aaPredicted RBP19.43■□□□□ 0.7
NOMO3-212ENST00000574894 CNBD1Q8NA66 436 aa19.43■□□□□ 0.7
NOMO3-212ENST00000574894 WWC3Q9ULE0 1092 aa19.42■□□□□ 0.7
NOMO3-212ENST00000574894 HOXB7P09629 217 aa19.41■□□□□ 0.7
NOMO3-212ENST00000574894 CHRNA5P30532 468 aa19.41■□□□□ 0.7
NOMO3-212ENST00000574894 PRR5LQ6MZQ0 368 aa19.41■□□□□ 0.7
NOMO3-212ENST00000574894 C2CD5Q86YS7 1000 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms