RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 PRAMEF22A3QJZ6 481 aa36.62■■■■□ 3.45
SCARF1-207ENST00000573867 ANP32CO43423 234 aa36.62■■■■□ 3.45
SCARF1-207ENST00000573867 KDM3BQ7LBC6 1761 aa36.61■■■■□ 3.45
SCARF1-207ENST00000573867 RFC4P35249 363 aa36.61■■■■□ 3.45
SCARF1-207ENST00000573867 SRP68Q9UHB9 627 aaKnown RBP36.61■■■■□ 3.45
SCARF1-207ENST00000573867 GYS1P13807 737 aa36.6■■■■□ 3.45
SCARF1-207ENST00000573867 STARD3NLO95772 234 aa36.59■■■■□ 3.45
SCARF1-207ENST00000573867 NEUROD2Q15784 382 aa36.58■■■■□ 3.45
SCARF1-207ENST00000573867 KLHL34Q8N239 644 aa36.58■■■■□ 3.45
SCARF1-207ENST00000573867 USP42Q9H9J4 1324 aaKnown RBP36.58■■■■□ 3.45
SCARF1-207ENST00000573867 TEX13AQ9BXU3 409 aaPredicted RBP36.57■■■■□ 3.44
SCARF1-207ENST00000573867 COL15A1P39059 1388 aa36.56■■■■□ 3.44
SCARF1-207ENST00000573867 CANXP27824 592 aaKnown RBP36.56■■■■□ 3.44
SCARF1-207ENST00000573867 TRIM35Q9UPQ4 493 aa36.56■■■■□ 3.44
SCARF1-207ENST00000573867 USP16Q9Y5T5 823 aa36.56■■■■□ 3.44
SCARF1-207ENST00000573867 A1BGP04217 495 aa36.54■■■■□ 3.44
SCARF1-207ENST00000573867 MMP10P09238 476 aa36.54■■■■□ 3.44
SCARF1-207ENST00000573867 NLGN2Q8NFZ4 835 aa36.54■■■■□ 3.44
SCARF1-207ENST00000573867 PNISRQ8TF01 805 aaKnown RBP36.53■■■■□ 3.44
SCARF1-207ENST00000573867 SNRPA1P09661 255 aaKnown RBP36.52■■■■□ 3.44
SCARF1-207ENST00000573867 EIF5P55010 431 aaKnown RBP36.52■■■■□ 3.44
SCARF1-207ENST00000573867 NLGN1Q8N2Q7 840 aa36.52■■■■□ 3.44
SCARF1-207ENST00000573867 LMOD3Q0VAK6 560 aa36.51■■■■□ 3.44
SCARF1-207ENST00000573867 FKBP8Q14318 412 aa36.51■■■■□ 3.44
SCARF1-207ENST00000573867 EIF4A1P60842 406 aaKnown RBP36.5■■■■□ 3.43
SCARF1-207ENST00000573867 MRS2Q9HD23 443 aa36.49■■■■□ 3.43
SCARF1-207ENST00000573867 APAF1O14727 1248 aa36.48■■■■□ 3.43
SCARF1-207ENST00000573867 PIP4K2AP48426 406 aaPredicted RBP36.48■■■■□ 3.43
SCARF1-207ENST00000573867 USPL1Q5W0Q7 1092 aa36.48■■■■□ 3.43
SCARF1-207ENST00000573867 NARFQ9UHQ1 456 aa36.47■■■■□ 3.43
SCARF1-207ENST00000573867 BCL2L12Q9HB09 334 aa36.46■■■■□ 3.43
SCARF1-207ENST00000573867 TSPYL4Q9UJ04 414 aa36.45■■■■□ 3.43
SCARF1-207ENST00000573867 ZPR1O75312 459 aa36.44■■■■□ 3.42
SCARF1-207ENST00000573867 GIGYF1O75420 1035 aaPredicted RBP36.44■■■■□ 3.42
SCARF1-207ENST00000573867 IL6STP40189 918 aaPredicted RBP36.44■■■■□ 3.42
SCARF1-207ENST00000573867 CD2APQ9Y5K6 639 aa36.44■■■■□ 3.42
SCARF1-207ENST00000573867 LAMB4A4D0S4 1761 aa36.44■■■■□ 3.42
SCARF1-207ENST00000573867 DDR1Q08345 913 aa36.43■■■■□ 3.42
SCARF1-207ENST00000573867 ZNF330Q9Y3S2 320 aaPredicted RBP36.42■■■■□ 3.42
SCARF1-207ENST00000573867 NBPF26B4DH59 902 aa36.41■■■■□ 3.42
SCARF1-207ENST00000573867 NBPF10Q6P3W6 841 aaKnown RBP36.41■■■■□ 3.42
SCARF1-207ENST00000573867 NBPF15Q8N660 670 aa36.41■■■■□ 3.42
SCARF1-207ENST00000573867 GOLGB1Q14789 3259 aaKnown RBP36.4■■■■□ 3.42
SCARF1-207ENST00000573867 SCN7AQ01118 1682 aa36.39■■■■□ 3.42
SCARF1-207ENST00000573867 TM4SF1P30408 202 aa36.39■■■■□ 3.42
SCARF1-207ENST00000573867 BABAM1Q9NWV8 329 aa36.39■■■■□ 3.42
SCARF1-207ENST00000573867 TBC1D2BQ9UPU7 963 aa36.39■■■■□ 3.42
SCARF1-207ENST00000573867 UTRNP46939 3433 aa36.38■■■■□ 3.41
SCARF1-207ENST00000573867 C10orf71Q711Q0 1435 aa36.38■■■■□ 3.41
SCARF1-207ENST00000573867 A0A087WZG4 1122 aa36.37■■■■□ 3.41
SCARF1-207ENST00000573867 CHL1O00533 1208 aa36.37■■■■□ 3.41
SCARF1-207ENST00000573867 PARP3Q9Y6F1 533 aa36.37■■■■□ 3.41
SCARF1-207ENST00000573867 SENP3-EIF4A1A0A087X0R7 540 aa36.36■■■■□ 3.41
SCARF1-207ENST00000573867 POLRMTO00411 1230 aaKnown RBP36.35■■■■□ 3.41
SCARF1-207ENST00000573867 NFIXQ14938 502 aa36.35■■■■□ 3.41
SCARF1-207ENST00000573867 KIF13BQ9NQT8 1826 aa36.34■■■■□ 3.41
SCARF1-207ENST00000573867 KIAA1551Q9HCM1 1747 aa36.34■■■■□ 3.41
SCARF1-207ENST00000573867 CAMTA2O94983 1202 aa36.33■■■■□ 3.41
SCARF1-207ENST00000573867 LAS1LQ9Y4W2 734 aaKnown RBP36.33■■■■□ 3.41
SCARF1-207ENST00000573867 BCORQ6W2J9 1755 aa36.31■■■■□ 3.4
SCARF1-207ENST00000573867 KRT24Q2M2I5 525 aa36.31■■■■□ 3.4
SCARF1-207ENST00000573867 DZIP3Q86Y13 1208 aaKnown RBP36.31■■■■□ 3.4
SCARF1-207ENST00000573867 DCAF8L1A6NGE4 600 aa36.3■■■■□ 3.4
SCARF1-207ENST00000573867 PXDNLA1KZ92 1463 aa36.3■■■■□ 3.4
SCARF1-207ENST00000573867 YBX3P16989 372 aaKnown RBP eCLIP36.28■■■■□ 3.4
SCARF1-207ENST00000573867 TBC1D9BQ66K14 1250 aa36.28■■■■□ 3.4
SCARF1-207ENST00000573867 ZNF853P0CG23 659 aa36.27■■■■□ 3.4
SCARF1-207ENST00000573867 PELP1Q8IZL8 1130 aaKnown RBP36.27■■■■□ 3.4
SCARF1-207ENST00000573867 CFAP44Q96MT7 982 aa36.27■■■■□ 3.4
SCARF1-207ENST00000573867 NRXN2Q9P2S2 1712 aa36.26■■■■□ 3.4
SCARF1-207ENST00000573867 GPR162Q16538 588 aa36.26■■■■□ 3.4
SCARF1-207ENST00000573867 BICDL1Q6ZP65 573 aa36.26■■■■□ 3.4
SCARF1-207ENST00000573867 AFDNP55196 1824 aaKnown RBP36.25■■■■□ 3.39
SCARF1-207ENST00000573867 NPM2Q86SE8 214 aaKnown RBP36.25■■■■□ 3.39
SCARF1-207ENST00000573867 MBIPQ9NS73 344 aa36.24■■■■□ 3.39
SCARF1-207ENST00000573867 WWC3Q9ULE0 1092 aa36.24■■■■□ 3.39
SCARF1-207ENST00000573867 N4BP2Q86UW6 1770 aaPredicted RBP36.23■■■■□ 3.39
SCARF1-207ENST00000573867 SERPINB2P05120 415 aa36.22■■■■□ 3.39
SCARF1-207ENST00000573867 MYL6BP14649 208 aa36.21■■■■□ 3.39
SCARF1-207ENST00000573867 EIF2S2P20042 333 aaKnown RBP36.21■■■■□ 3.39
SCARF1-207ENST00000573867 PDIA6Q15084 440 aa36.21■■■■□ 3.39
SCARF1-207ENST00000573867 NGEFQ8N5V2 710 aa36.21■■■■□ 3.39
SCARF1-207ENST00000573867 IFT57Q9NWB7 429 aa36.21■■■■□ 3.39
SCARF1-207ENST00000573867 A0A0G2JLW4 131 aa36.2■■■■□ 3.39
SCARF1-207ENST00000573867 TGFB2P61812 414 aa36.2■■■■□ 3.39
SCARF1-207ENST00000573867 LRP10Q7Z4F1 713 aa36.2■■■■□ 3.39
SCARF1-207ENST00000573867 FAM9BQ8IZU0 186 aa36.2■■■■□ 3.39
SCARF1-207ENST00000573867 ERBB4Q15303 1308 aa36.19■■■■□ 3.38
SCARF1-207ENST00000573867 CCDC27Q2M243 656 aa36.19■■■■□ 3.38
SCARF1-207ENST00000573867 PROSER3Q2NL68 480 aa36.19■■■■□ 3.38
SCARF1-207ENST00000573867 CARMIL3Q8ND23 1372 aa36.18■■■■□ 3.38
SCARF1-207ENST00000573867 DPEP1P16444 411 aa36.18■■■■□ 3.38
SCARF1-207ENST00000573867 TTLL7Q6ZT98 887 aa36.18■■■■□ 3.38
SCARF1-207ENST00000573867 NECTIN2Q92692 538 aa36.18■■■■□ 3.38
SCARF1-207ENST00000573867 ANXA1P04083 346 aa36.17■■■■□ 3.38
SCARF1-207ENST00000573867 WWC1Q8IX03 1113 aa36.17■■■■□ 3.38
SCARF1-207ENST00000573867 KCNA3P22001 575 aa36.16■■■■□ 3.38
SCARF1-207ENST00000573867 CALD1Q05682 793 aaKnown RBP36.16■■■■□ 3.38
SCARF1-207ENST00000573867 HLFQ16534 295 aa36.16■■■■□ 3.38
SCARF1-207ENST00000573867 GNAI1P63096 354 aa36.15■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms