RNA–Protein interactions for RNA: ENST00000572445.1

PRPF8-204, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-204ENST00000572445 USP54Q70EL1 1684 aa8.85□□□□□ -0.99
PRPF8-204ENST00000572445 TTC21AQ8NDW8 1320 aa8.84□□□□□ -0.99
PRPF8-204ENST00000572445 CD163L1Q9NR16 1453 aa8.84□□□□□ -0.99
PRPF8-204ENST00000572445 GALR2O43603 387 aaPredicted RBP8.84□□□□□ -0.99
PRPF8-204ENST00000572445 FBLN1P23142 703 aa8.84□□□□□ -0.99
PRPF8-204ENST00000572445 KCNQ4P56696 695 aa8.84□□□□□ -0.99
PRPF8-204ENST00000572445 KCNH5Q8NCM2 988 aa8.84□□□□□ -0.99
PRPF8-204ENST00000572445 RGS22Q8NE09 1264 aa8.84□□□□□ -0.99
PRPF8-204ENST00000572445 ANKRD24Q8TF21 1146 aa8.84□□□□□ -0.99
PRPF8-204ENST00000572445 SYTL4Q96C24 671 aaPredicted RBP8.84□□□□□ -0.99
PRPF8-204ENST00000572445 KIF20BQ96Q89 1820 aa8.84□□□□□ -0.99
PRPF8-204ENST00000572445 BRD4O60885 1362 aaPredicted RBP8.84□□□□□ -0.99
PRPF8-204ENST00000572445 CCDC7Q96M83 1385 aa8.84□□□□□ -0.99
PRPF8-204ENST00000572445 NINLQ9Y2I6 1382 aa8.84□□□□□ -0.99
PRPF8-204ENST00000572445 SHANK3Q9BYB0 1731 aa8.83□□□□□ -1
PRPF8-204ENST00000572445 EXOC5O00471 708 aa8.83□□□□□ -1
PRPF8-204ENST00000572445 TBC1D12O60347 775 aa8.83□□□□□ -1
PRPF8-204ENST00000572445 TXNRD1Q16881 649 aa8.83□□□□□ -1
PRPF8-204ENST00000572445 TSR1Q2NL82 804 aaKnown RBP8.83□□□□□ -1
PRPF8-204ENST00000572445 HDGFL2Q7Z4V5 671 aaPredicted RBP8.83□□□□□ -1
PRPF8-204ENST00000572445 DDX54Q8TDD1 881 aaKnown RBP8.83□□□□□ -1
PRPF8-204ENST00000572445 CARD10Q9BWT7 1032 aa8.83□□□□□ -1
PRPF8-204ENST00000572445 SLC12A5Q9H2X9 1139 aa8.83□□□□□ -1
PRPF8-204ENST00000572445 FAM208AQ9UK61 1670 aaKnown RBP8.83□□□□□ -1
PRPF8-204ENST00000572445 CHD4Q14839 1912 aa8.83□□□□□ -1
PRPF8-204ENST00000572445 SBNO2Q9Y2G9 1366 aa8.83□□□□□ -1
PRPF8-204ENST00000572445 PAPPAQ13219 1627 aa8.83□□□□□ -1
PRPF8-204ENST00000572445 ERBB3P21860 1342 aa8.82□□□□□ -1
PRPF8-204ENST00000572445 USHBP1Q8N6Y0 703 aa8.82□□□□□ -1
PRPF8-204ENST00000572445 FHDC1Q9C0D6 1143 aaPredicted RBP8.82□□□□□ -1
PRPF8-204ENST00000572445 C19orf67A6NJJ6 358 aa8.81□□□□□ -1
PRPF8-204ENST00000572445 IL2RBP14784 551 aa8.81□□□□□ -1
PRPF8-204ENST00000572445 RFC5P40937 340 aa8.81□□□□□ -1
PRPF8-204ENST00000572445 CLK2P49760 499 aaKnown RBP8.81□□□□□ -1
PRPF8-204ENST00000572445 ATN1P54259 1190 aaPredicted RBP8.81□□□□□ -1
PRPF8-204ENST00000572445 ZNF827Q17R98 1081 aa8.81□□□□□ -1
PRPF8-204ENST00000572445 ZNF330Q9Y3S2 320 aaPredicted RBP8.81□□□□□ -1
PRPF8-204ENST00000572445 EDC4Q6P2E9 1401 aaKnown RBP8.8□□□□□ -1
PRPF8-204ENST00000572445 MAP3K7O43318 606 aa8.8□□□□□ -1
PRPF8-204ENST00000572445 SLC15A2Q16348 729 aa8.8□□□□□ -1
PRPF8-204ENST00000572445 CDCA7Q9BWT1 371 aaPredicted RBP8.8□□□□□ -1
PRPF8-204ENST00000572445 OCEL1Q9H607 264 aa8.8□□□□□ -1
PRPF8-204ENST00000572445 MTMR7Q9Y216 660 aa8.8□□□□□ -1
PRPF8-204ENST00000572445 MEGF6O75095 1541 aa8.8□□□□□ -1
PRPF8-204ENST00000572445 PLSCR1O15162 318 aa8.79□□□□□ -1
PRPF8-204ENST00000572445 AMPHP49418 695 aa8.79□□□□□ -1
PRPF8-204ENST00000572445 RRS1Q15050 365 aaKnown RBP8.79□□□□□ -1
PRPF8-204ENST00000572445 MSL1Q68DK7 614 aa8.79□□□□□ -1
PRPF8-204ENST00000572445 METTL3Q86U44 580 aaKnown RBP8.79□□□□□ -1
PRPF8-204ENST00000572445 MTMR14Q8NCE2 650 aa8.79□□□□□ -1
PRPF8-204ENST00000572445 POLR3GLQ9BT43 218 aa8.79□□□□□ -1
PRPF8-204ENST00000572445 GZF1Q9H116 711 aaPredicted RBP8.79□□□□□ -1
PRPF8-204ENST00000572445 WWC3Q9ULE0 1092 aa8.79□□□□□ -1
PRPF8-204ENST00000572445 TBC1D2Q9BYX2 928 aa8.78□□□□□ -1
PRPF8-204ENST00000572445 GDPD2Q9HCC8 539 aa8.78□□□□□ -1
PRPF8-204ENST00000572445 TERF2IPQ9NYB0 399 aa8.78□□□□□ -1
PRPF8-204ENST00000572445 LIMD1Q9UGP4 676 aa8.78□□□□□ -1
PRPF8-204ENST00000572445 MAP3K19Q56UN5 1328 aa8.78□□□□□ -1
PRPF8-204ENST00000572445 USP31Q70CQ4 1352 aa8.77□□□□□ -1.01
PRPF8-204ENST00000572445 ST20-MTHFSA0A0A6YYL1 179 aa8.77□□□□□ -1.01
PRPF8-204ENST00000572445 POM121CA8CG34 1229 aa8.77□□□□□ -1.01
PRPF8-204ENST00000572445 C11orf95C9JLR9 678 aaPredicted RBP8.77□□□□□ -1.01
PRPF8-204ENST00000572445 G3V3G9 751 aa8.77□□□□□ -1.01
PRPF8-204ENST00000572445 TMCO4Q5TGY1 634 aa8.77□□□□□ -1.01
PRPF8-204ENST00000572445 BANK1Q8NDB2 785 aa8.77□□□□□ -1.01
PRPF8-204ENST00000572445 ZNF428Q96B54 188 aa8.77□□□□□ -1.01
PRPF8-204ENST00000572445 COG3Q96JB2 828 aa8.77□□□□□ -1.01
PRPF8-204ENST00000572445 MTFR1LQ9H019 292 aa8.77□□□□□ -1.01
PRPF8-204ENST00000572445 GGNBP2Q9H3C7 697 aa8.77□□□□□ -1.01
PRPF8-204ENST00000572445 LRRC4BQ9NT99 713 aa8.77□□□□□ -1.01
PRPF8-204ENST00000572445 C5P01031 1676 aa8.77□□□□□ -1.01
PRPF8-204ENST00000572445 LY75O60449 1722 aa8.77□□□□□ -1.01
PRPF8-204ENST00000572445 TOGARAM1Q9Y4F4 1720 aa8.77□□□□□ -1.01
PRPF8-204ENST00000572445 ITGB4P16144 1822 aa8.76□□□□□ -1.01
PRPF8-204ENST00000572445 MFAP1P55081 439 aaKnown RBP8.76□□□□□ -1.01
PRPF8-204ENST00000572445 GPR162Q16538 588 aa8.76□□□□□ -1.01
PRPF8-204ENST00000572445 FOXD4L5Q5VV16 416 aaPredicted RBP8.76□□□□□ -1.01
PRPF8-204ENST00000572445 PTCD2Q8WV60 388 aaKnown RBP8.76□□□□□ -1.01
PRPF8-204ENST00000572445 FOXD4L4Q8WXT5 416 aaPredicted RBP8.76□□□□□ -1.01
PRPF8-204ENST00000572445 PCDHGA10Q9Y5H3 936 aa8.76□□□□□ -1.01
PRPF8-204ENST00000572445 QSER1Q2KHR3 1735 aa8.76□□□□□ -1.01
PRPF8-204ENST00000572445 BCL9O00512 1426 aa8.75□□□□□ -1.01
PRPF8-204ENST00000572445 PHF14O94880 888 aa8.75□□□□□ -1.01
PRPF8-204ENST00000572445 SYT17Q9BSW7 474 aa8.75□□□□□ -1.01
PRPF8-204ENST00000572445 TFCP2L1Q9NZI6 479 aa8.75□□□□□ -1.01
PRPF8-204ENST00000572445 TAF1LQ8IZX4 1826 aa8.75□□□□□ -1.01
PRPF8-204ENST00000572445 USP47Q96K76 1375 aa8.74□□□□□ -1.01
PRPF8-204ENST00000572445 SMG6Q86US8 1419 aaKnown RBP8.74□□□□□ -1.01
PRPF8-204ENST00000572445 SENP3-EIF4A1A0A087X0R7 540 aa8.74□□□□□ -1.01
PRPF8-204ENST00000572445 PPM1GO15355 546 aaPredicted RBP8.74□□□□□ -1.01
PRPF8-204ENST00000572445 HOXC9P31274 260 aa8.74□□□□□ -1.01
PRPF8-204ENST00000572445 IFFO2Q5TF58 517 aa8.74□□□□□ -1.01
PRPF8-204ENST00000572445 PADI6Q6TGC4 694 aa8.74□□□□□ -1.01
PRPF8-204ENST00000572445 ZNF784Q8NCA9 323 aaPredicted RBP8.74□□□□□ -1.01
PRPF8-204ENST00000572445 NLGN2Q8NFZ4 835 aa8.74□□□□□ -1.01
PRPF8-204ENST00000572445 PXYLP1Q8TE99 480 aa8.74□□□□□ -1.01
PRPF8-204ENST00000572445 EPAS1Q99814 870 aa8.74□□□□□ -1.01
PRPF8-204ENST00000572445 CCNL1Q9UK58 526 aaPredicted RBP8.74□□□□□ -1.01
PRPF8-204ENST00000572445 ADGRG1Q9Y653 693 aa8.74□□□□□ -1.01
PRPF8-204ENST00000572445 PNPLA7Q6ZV29 1317 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms