RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 PNNQ9H307 717 aaKnown RBP19.26■□□□□ 0.67
LITAF-208ENST00000571627 COL15A1P39059 1388 aa19.26■□□□□ 0.67
LITAF-208ENST00000571627 CANXP27824 592 aaKnown RBP19.25■□□□□ 0.67
LITAF-208ENST00000571627 CCDC146Q8IYE0 955 aa19.25■□□□□ 0.67
LITAF-208ENST00000571627 PELP1Q8IZL8 1130 aaKnown RBP19.25■□□□□ 0.67
LITAF-208ENST00000571627 NLGN1Q8N2Q7 840 aa19.25■□□□□ 0.67
LITAF-208ENST00000571627 KIF13BQ9NQT8 1826 aa19.25■□□□□ 0.67
LITAF-208ENST00000571627 STARD3NLO95772 234 aa19.24■□□□□ 0.67
LITAF-208ENST00000571627 MIS18AQ9NYP9 233 aa19.24■□□□□ 0.67
LITAF-208ENST00000571627 CD2APQ9Y5K6 639 aa19.24■□□□□ 0.67
LITAF-208ENST00000571627 CHD4Q14839 1912 aa19.23■□□□□ 0.67
LITAF-208ENST00000571627 PRAMEF22A3QJZ6 481 aa19.23■□□□□ 0.67
LITAF-208ENST00000571627 FKBP8Q14318 412 aa19.23■□□□□ 0.67
LITAF-208ENST00000571627 WDR43Q15061 677 aaKnown RBP eCLIP19.23■□□□□ 0.67
LITAF-208ENST00000571627 TAF7Q15545 349 aaPredicted RBP19.23■□□□□ 0.67
LITAF-208ENST00000571627 GPR162Q16538 588 aa19.23■□□□□ 0.67
LITAF-208ENST00000571627 KIAA1551Q9HCM1 1747 aa19.22■□□□□ 0.67
LITAF-208ENST00000571627 LAMB4A4D0S4 1761 aa19.22■□□□□ 0.67
LITAF-208ENST00000571627 N4BP2Q86UW6 1770 aaPredicted RBP19.22■□□□□ 0.67
LITAF-208ENST00000571627 USPL1Q5W0Q7 1092 aa19.22■□□□□ 0.67
LITAF-208ENST00000571627 SCN7AQ01118 1682 aa19.21■□□□□ 0.67
LITAF-208ENST00000571627 ZPR1O75312 459 aa19.21■□□□□ 0.67
LITAF-208ENST00000571627 TEX13AQ9BXU3 409 aaPredicted RBP19.21■□□□□ 0.67
LITAF-208ENST00000571627 RRP7AQ9Y3A4 280 aaKnown RBP19.21■□□□□ 0.67
LITAF-208ENST00000571627 ZNF330Q9Y3S2 320 aaPredicted RBP19.21■□□□□ 0.67
LITAF-208ENST00000571627 A1BGP04217 495 aa19.2■□□□□ 0.66
LITAF-208ENST00000571627 TMPOP42166 694 aaKnown RBP19.2■□□□□ 0.66
LITAF-208ENST00000571627 RIPK4P57078 832 aa19.2■□□□□ 0.66
LITAF-208ENST00000571627 WWC3Q9ULE0 1092 aa19.2■□□□□ 0.66
LITAF-208ENST00000571627 ADAMTS8Q9UP79 889 aa19.2■□□□□ 0.66
LITAF-208ENST00000571627 USP16Q9Y5T5 823 aa19.2■□□□□ 0.66
LITAF-208ENST00000571627 PARP3Q9Y6F1 533 aa19.2■□□□□ 0.66
LITAF-208ENST00000571627 AFDNP55196 1824 aaKnown RBP19.2■□□□□ 0.66
LITAF-208ENST00000571627 C10orf71Q711Q0 1435 aa19.19■□□□□ 0.66
LITAF-208ENST00000571627 YBX3P16989 372 aaKnown RBP eCLIP19.19■□□□□ 0.66
LITAF-208ENST00000571627 YY1P25490 414 aa19.19■□□□□ 0.66
LITAF-208ENST00000571627 PIP4K2AP48426 406 aaPredicted RBP19.19■□□□□ 0.66
LITAF-208ENST00000571627 EIF5P55010 431 aaKnown RBP19.19■□□□□ 0.66
LITAF-208ENST00000571627 DDR1Q08345 913 aa19.19■□□□□ 0.66
LITAF-208ENST00000571627 NARFQ9UHQ1 456 aa19.19■□□□□ 0.66
LITAF-208ENST00000571627 NEUROD2Q15784 382 aa19.18■□□□□ 0.66
LITAF-208ENST00000571627 PXDNLA1KZ92 1463 aa19.17■□□□□ 0.66
LITAF-208ENST00000571627 BCORQ6W2J9 1755 aa19.17■□□□□ 0.66
LITAF-208ENST00000571627 SNRPA1P09661 255 aaKnown RBP19.17■□□□□ 0.66
LITAF-208ENST00000571627 RUNDC1Q96C34 613 aa19.17■□□□□ 0.66
LITAF-208ENST00000571627 BCL2L12Q9HB09 334 aa19.17■□□□□ 0.66
LITAF-208ENST00000571627 POLRMTO00411 1230 aaKnown RBP19.15■□□□□ 0.66
LITAF-208ENST00000571627 TM4SF1P30408 202 aa19.15■□□□□ 0.66
LITAF-208ENST00000571627 IL6STP40189 918 aaPredicted RBP19.15■□□□□ 0.66
LITAF-208ENST00000571627 CCDC184Q52MB2 194 aa19.15■□□□□ 0.66
LITAF-208ENST00000571627 PNISRQ8TF01 805 aaKnown RBP19.15■□□□□ 0.66
LITAF-208ENST00000571627 TBC1D2BQ9UPU7 963 aa19.15■□□□□ 0.66
LITAF-208ENST00000571627 NRXN2Q9P2S2 1712 aa19.14■□□□□ 0.66
LITAF-208ENST00000571627 BRCA1P38398 1863 aaKnown RBP19.14■□□□□ 0.65
LITAF-208ENST00000571627 A0A087WZG4 1122 aa19.14■□□□□ 0.65
LITAF-208ENST00000571627 NFIXQ14938 502 aa19.14■□□□□ 0.65
LITAF-208ENST00000571627 ANP32CO43423 234 aa19.13■□□□□ 0.65
LITAF-208ENST00000571627 EIF4A1P60842 406 aaKnown RBP19.13■□□□□ 0.65
LITAF-208ENST00000571627 LMOD3Q0VAK6 560 aa19.13■□□□□ 0.65
LITAF-208ENST00000571627 TSPYL4Q9UJ04 414 aa19.13■□□□□ 0.65
LITAF-208ENST00000571627 A0A0G2JLW4 131 aa19.12■□□□□ 0.65
LITAF-208ENST00000571627 NBPF26B4DH59 902 aa19.12■□□□□ 0.65
LITAF-208ENST00000571627 NBPF10Q6P3W6 841 aaKnown RBP19.12■□□□□ 0.65
LITAF-208ENST00000571627 BICDL1Q6ZP65 573 aa19.12■□□□□ 0.65
LITAF-208ENST00000571627 NBPF15Q8N660 670 aa19.12■□□□□ 0.65
LITAF-208ENST00000571627 GIGYF1O75420 1035 aaPredicted RBP19.11■□□□□ 0.65
LITAF-208ENST00000571627 NPM2Q86SE8 214 aaKnown RBP19.11■□□□□ 0.65
LITAF-208ENST00000571627 TRIM35Q9UPQ4 493 aa19.11■□□□□ 0.65
LITAF-208ENST00000571627 DPEP1P16444 411 aa19.1■□□□□ 0.65
LITAF-208ENST00000571627 TGFB2P61812 414 aa19.1■□□□□ 0.65
LITAF-208ENST00000571627 TBC1D9BQ66K14 1250 aa19.1■□□□□ 0.65
LITAF-208ENST00000571627 DZIP3Q86Y13 1208 aaKnown RBP19.1■□□□□ 0.65
LITAF-208ENST00000571627 GRIN3BO60391 1043 aa19.09■□□□□ 0.65
LITAF-208ENST00000571627 CAMTA2O94983 1202 aa19.09■□□□□ 0.65
LITAF-208ENST00000571627 ANKRD31Q8N7Z5 1873 aa19.08■□□□□ 0.65
LITAF-208ENST00000571627 SERPINB2P05120 415 aa19.08■□□□□ 0.64
LITAF-208ENST00000571627 CARMIL3Q8ND23 1372 aa19.07■□□□□ 0.64
LITAF-208ENST00000571627 APAF1O14727 1248 aa19.07■□□□□ 0.64
LITAF-208ENST00000571627 LAS1LQ9Y4W2 734 aaKnown RBP19.07■□□□□ 0.64
LITAF-208ENST00000571627 KCNA3P22001 575 aa19.06■□□□□ 0.64
LITAF-208ENST00000571627 CHRNA5P30532 468 aa19.06■□□□□ 0.64
LITAF-208ENST00000571627 NGEFQ8N5V2 710 aa19.06■□□□□ 0.64
LITAF-208ENST00000571627 BCS1LQ9Y276 419 aa19.06■□□□□ 0.64
LITAF-208ENST00000571627 ARFGEF1Q9Y6D6 1849 aa19.06■□□□□ 0.64
LITAF-208ENST00000571627 DLEC1Q9Y238 1755 aa19.06■□□□□ 0.64
LITAF-208ENST00000571627 SENP3-EIF4A1A0A087X0R7 540 aa19.05■□□□□ 0.64
LITAF-208ENST00000571627 NUP98P52948 1817 aa19.04■□□□□ 0.64
LITAF-208ENST00000571627 CCDC24Q8N4L8 307 aa19.04■□□□□ 0.64
LITAF-208ENST00000571627 MRS2Q9HD23 443 aa19.04■□□□□ 0.64
LITAF-208ENST00000571627 BABAM1Q9NWV8 329 aa19.04■□□□□ 0.64
LITAF-208ENST00000571627 COL11A2P13942 1736 aaPredicted RBP19.03■□□□□ 0.64
LITAF-208ENST00000571627 CHL1O00533 1208 aa19.03■□□□□ 0.64
LITAF-208ENST00000571627 MYL6BP14649 208 aa19.03■□□□□ 0.64
LITAF-208ENST00000571627 KRT24Q2M2I5 525 aa19.03■□□□□ 0.64
LITAF-208ENST00000571627 EIF2S2P20042 333 aaKnown RBP19.02■□□□□ 0.64
LITAF-208ENST00000571627 ZNF784Q8NCA9 323 aaPredicted RBP19.02■□□□□ 0.64
LITAF-208ENST00000571627 SETDB2Q96T68 719 aa19.02■□□□□ 0.64
LITAF-208ENST00000571627 HLFQ16534 295 aa19.01■□□□□ 0.63
LITAF-208ENST00000571627 PRR5LQ6MZQ0 368 aa19.01■□□□□ 0.63
LITAF-208ENST00000571627 NECTIN2Q92692 538 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 176.7 ms