RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 RPS6KA4O75676 772 aa9.18□□□□□ -0.94
SMG6-209ENST00000571442 A1BGP04217 495 aa9.18□□□□□ -0.94
SMG6-209ENST00000571442 ZNF853P0CG23 659 aa9.18□□□□□ -0.94
SMG6-209ENST00000571442 RC3H1Q5TC82 1133 aaKnown RBP9.18□□□□□ -0.94
SMG6-209ENST00000571442 MSL1Q68DK7 614 aa9.18□□□□□ -0.94
SMG6-209ENST00000571442 FMNL2Q96PY5 1086 aa9.18□□□□□ -0.94
SMG6-209ENST00000571442 TSPYL4Q9UJ04 414 aa9.18□□□□□ -0.94
SMG6-209ENST00000571442 SOS1Q07889 1333 aaPredicted RBP9.17□□□□□ -0.94
SMG6-209ENST00000571442 DCAF8L1A6NGE4 600 aa9.17□□□□□ -0.94
SMG6-209ENST00000571442 GIGYF1O75420 1035 aaPredicted RBP9.17□□□□□ -0.94
SMG6-209ENST00000571442 SSFA2P28290 1259 aa9.17□□□□□ -0.94
SMG6-209ENST00000571442 LMOD3Q0VAK6 560 aa9.17□□□□□ -0.94
SMG6-209ENST00000571442 WWC1Q8IX03 1113 aa9.17□□□□□ -0.94
SMG6-209ENST00000571442 ARHGEF1Q92888 912 aaKnown RBP9.17□□□□□ -0.94
SMG6-209ENST00000571442 SPINK5Q9NQ38 1064 aaPredicted RBP9.17□□□□□ -0.94
SMG6-209ENST00000571442 CCDC87Q9NVE4 849 aa9.17□□□□□ -0.94
SMG6-209ENST00000571442 SRP68Q9UHB9 627 aaKnown RBP9.17□□□□□ -0.94
SMG6-209ENST00000571442 LAS1LQ9Y4W2 734 aaKnown RBP9.17□□□□□ -0.94
SMG6-209ENST00000571442 NBPF26B4DH59 902 aa9.16□□□□□ -0.94
SMG6-209ENST00000571442 CANXP27824 592 aaKnown RBP9.16□□□□□ -0.94
SMG6-209ENST00000571442 NBPF10Q6P3W6 841 aaKnown RBP9.16□□□□□ -0.94
SMG6-209ENST00000571442 NBPF15Q8N660 670 aa9.16□□□□□ -0.94
SMG6-209ENST00000571442 MTFR1LQ9H019 292 aa9.16□□□□□ -0.94
SMG6-209ENST00000571442 MBIPQ9NS73 344 aa9.16□□□□□ -0.94
SMG6-209ENST00000571442 RTCBQ9Y3I0 505 aaKnown RBP9.16□□□□□ -0.94
SMG6-209ENST00000571442 MSH5O43196 834 aa9.15□□□□□ -0.94
SMG6-209ENST00000571442 SNRPA1P09661 255 aaKnown RBP9.15□□□□□ -0.94
SMG6-209ENST00000571442 YY1P25490 414 aa9.15□□□□□ -0.94
SMG6-209ENST00000571442 EIF5P55010 431 aaKnown RBP9.15□□□□□ -0.94
SMG6-209ENST00000571442 CCDC27Q2M243 656 aa9.15□□□□□ -0.94
SMG6-209ENST00000571442 TSR2Q969E8 191 aaKnown RBP9.15□□□□□ -0.94
SMG6-209ENST00000571442 CFAP44Q96MT7 982 aa9.15□□□□□ -0.94
SMG6-209ENST00000571442 BCL2L12Q9HB09 334 aa9.15□□□□□ -0.94
SMG6-209ENST00000571442 COL15A1P39059 1388 aa9.14□□□□□ -0.95
SMG6-209ENST00000571442 ZNF521Q96K83 1311 aa9.14□□□□□ -0.95
SMG6-209ENST00000571442 ANXA1P04083 346 aa9.14□□□□□ -0.95
SMG6-209ENST00000571442 GYS1P13807 737 aa9.14□□□□□ -0.95
SMG6-209ENST00000571442 PROSER3Q2NL68 480 aa9.14□□□□□ -0.95
SMG6-209ENST00000571442 TRAPPC3LQ5T215 181 aa9.14□□□□□ -0.95
SMG6-209ENST00000571442 IFT57Q9NWB7 429 aa9.14□□□□□ -0.95
SMG6-209ENST00000571442 BCORQ6W2J9 1755 aa9.14□□□□□ -0.95
SMG6-209ENST00000571442 SCN7AQ01118 1682 aa9.13□□□□□ -0.95
SMG6-209ENST00000571442 USP42Q9H9J4 1324 aaKnown RBP9.13□□□□□ -0.95
SMG6-209ENST00000571442 STARD3NLO95772 234 aa9.13□□□□□ -0.95
SMG6-209ENST00000571442 FKBP8Q14318 412 aa9.13□□□□□ -0.95
SMG6-209ENST00000571442 PDIA6Q15084 440 aa9.13□□□□□ -0.95
SMG6-209ENST00000571442 LRP10Q7Z4F1 713 aa9.13□□□□□ -0.95
SMG6-209ENST00000571442 TSPYL6Q8N831 410 aa9.13□□□□□ -0.95
SMG6-209ENST00000571442 C8orf58Q8NAV2 365 aa9.13□□□□□ -0.95
SMG6-209ENST00000571442 SLC16A10Q8TF71 515 aa9.13□□□□□ -0.95
SMG6-209ENST00000571442 NECTIN2Q92692 538 aa9.13□□□□□ -0.95
SMG6-209ENST00000571442 BABAM1Q9NWV8 329 aa9.13□□□□□ -0.95
SMG6-209ENST00000571442 ADRA2BP18089 450 aa9.12□□□□□ -0.95
SMG6-209ENST00000571442 EIF2S2P20042 333 aaKnown RBP9.12□□□□□ -0.95
SMG6-209ENST00000571442 RFC4P35249 363 aa9.12□□□□□ -0.95
SMG6-209ENST00000571442 NCBP3Q53F19 620 aaKnown RBP9.12□□□□□ -0.95
SMG6-209ENST00000571442 USPL1Q5W0Q7 1092 aa9.12□□□□□ -0.95
SMG6-209ENST00000571442 FLAD1Q8NFF5 587 aa9.12□□□□□ -0.95
SMG6-209ENST00000571442 TEX13AQ9BXU3 409 aaPredicted RBP9.12□□□□□ -0.95
SMG6-209ENST00000571442 TBC1D2BQ9UPU7 963 aa9.12□□□□□ -0.95
SMG6-209ENST00000571442 ZNF330Q9Y3S2 320 aaPredicted RBP9.12□□□□□ -0.95
SMG6-209ENST00000571442 CHD4Q14839 1912 aa9.11□□□□□ -0.95
SMG6-209ENST00000571442 FANCIQ9NVI1 1328 aa9.11□□□□□ -0.95
SMG6-209ENST00000571442 AFDNP55196 1824 aaKnown RBP9.11□□□□□ -0.95
SMG6-209ENST00000571442 ELL2O00472 640 aaPredicted RBP9.11□□□□□ -0.95
SMG6-209ENST00000571442 CAMTA2O94983 1202 aa9.11□□□□□ -0.95
SMG6-209ENST00000571442 IL6STP40189 918 aaPredicted RBP9.11□□□□□ -0.95
SMG6-209ENST00000571442 GNAI1P63096 354 aa9.11□□□□□ -0.95
SMG6-209ENST00000571442 DDR1Q08345 913 aa9.11□□□□□ -0.95
SMG6-209ENST00000571442 DUSP27Q5VZP5 1158 aa9.11□□□□□ -0.95
SMG6-209ENST00000571442 TTLL7Q6ZT98 887 aa9.11□□□□□ -0.95
SMG6-209ENST00000571442 NARFQ9UHQ1 456 aa9.11□□□□□ -0.95
SMG6-209ENST00000571442 KIAA1551Q9HCM1 1747 aa9.11□□□□□ -0.95
SMG6-209ENST00000571442 MMP10P09238 476 aa9.1□□□□□ -0.95
SMG6-209ENST00000571442 MYL6BP14649 208 aa9.1□□□□□ -0.95
SMG6-209ENST00000571442 WDR63Q8IWG1 891 aa9.1□□□□□ -0.95
SMG6-209ENST00000571442 NGEFQ8N5V2 710 aa9.1□□□□□ -0.95
SMG6-209ENST00000571442 CDCA7LQ96GN5 454 aa9.1□□□□□ -0.95
SMG6-209ENST00000571442 ARXQ96QS3 562 aa9.1□□□□□ -0.95
SMG6-209ENST00000571442 FHDC1Q9C0D6 1143 aaPredicted RBP9.1□□□□□ -0.95
SMG6-209ENST00000571442 UTRNP46939 3433 aa9.09□□□□□ -0.95
SMG6-209ENST00000571442 IL16Q14005 1332 aa9.09□□□□□ -0.95
SMG6-209ENST00000571442 NRXN2Q9P2S2 1712 aa9.09□□□□□ -0.95
SMG6-209ENST00000571442 HMGB2P26583 209 aaKnown RBP9.09□□□□□ -0.95
SMG6-209ENST00000571442 TM4SF1P30408 202 aa9.09□□□□□ -0.95
SMG6-209ENST00000571442 NFIXQ14938 502 aa9.09□□□□□ -0.95
SMG6-209ENST00000571442 HLFQ16534 295 aa9.09□□□□□ -0.95
SMG6-209ENST00000571442 TBC1D9BQ66K14 1250 aa9.09□□□□□ -0.95
SMG6-209ENST00000571442 DZIP3Q86Y13 1208 aaKnown RBP9.09□□□□□ -0.95
SMG6-209ENST00000571442 NLGN2Q8NFZ4 835 aa9.09□□□□□ -0.95
SMG6-209ENST00000571442 CHPF2Q9P2E5 772 aa9.09□□□□□ -0.95
SMG6-209ENST00000571442 NUP98P52948 1817 aa9.09□□□□□ -0.95
SMG6-209ENST00000571442 KIF13BQ9NQT8 1826 aa9.08□□□□□ -0.96
SMG6-209ENST00000571442 POLRMTO00411 1230 aaKnown RBP9.08□□□□□ -0.96
SMG6-209ENST00000571442 TCERG1O14776 1098 aaKnown RBP9.08□□□□□ -0.96
SMG6-209ENST00000571442 CALD1Q05682 793 aaKnown RBP9.08□□□□□ -0.96
SMG6-209ENST00000571442 CARMIL3Q8ND23 1372 aa9.08□□□□□ -0.96
SMG6-209ENST00000571442 N4BP2Q86UW6 1770 aaPredicted RBP9.07□□□□□ -0.96
SMG6-209ENST00000571442 ANKRD31Q8N7Z5 1873 aa9.07□□□□□ -0.96
SMG6-209ENST00000571442 ZPR1O75312 459 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms