RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 BTBD11A6QL63 1104 aa16.77■□□□□ 0.28
TVP23B-204ENST00000571018 CYP19A1P11511 503 aaPredicted RBP16.77■□□□□ 0.28
TVP23B-204ENST00000571018 MSL1Q68DK7 614 aa16.77■□□□□ 0.28
TVP23B-204ENST00000571018 INTS5Q6P9B9 1019 aaKnown RBP16.77■□□□□ 0.28
TVP23B-204ENST00000571018 ZNF496Q96IT1 587 aaPredicted RBP16.77■□□□□ 0.28
TVP23B-204ENST00000571018 SYT17Q9BSW7 474 aa16.77■□□□□ 0.28
TVP23B-204ENST00000571018 WDR43Q15061 677 aaKnown RBP eCLIP16.76■□□□□ 0.27
TVP23B-204ENST00000571018 ARHGEF1Q92888 912 aaKnown RBP16.76■□□□□ 0.27
TVP23B-204ENST00000571018 CCDC87Q9NVE4 849 aa16.76■□□□□ 0.27
TVP23B-204ENST00000571018 FMNL2Q96PY5 1086 aa16.75■□□□□ 0.27
TVP23B-204ENST00000571018 HEG1Q9ULI3 1381 aa16.75■□□□□ 0.27
TVP23B-204ENST00000571018 MYH14Q7Z406 1995 aaKnown RBP16.75■□□□□ 0.27
TVP23B-204ENST00000571018 KCNQ3O43525 872 aa16.74■□□□□ 0.27
TVP23B-204ENST00000571018 RFC4P35249 363 aa16.74■□□□□ 0.27
TVP23B-204ENST00000571018 TAF7Q15545 349 aaPredicted RBP16.74■□□□□ 0.27
TVP23B-204ENST00000571018 TEX13AQ9BXU3 409 aaPredicted RBP16.74■□□□□ 0.27
TVP23B-204ENST00000571018 ADAMTS8Q9UP79 889 aa16.74■□□□□ 0.27
TVP23B-204ENST00000571018 DLG5Q8TDM6 1919 aa16.72■□□□□ 0.27
TVP23B-204ENST00000571018 STARD3NLO95772 234 aa16.72■□□□□ 0.27
TVP23B-204ENST00000571018 TMPOP42166 694 aaKnown RBP16.72■□□□□ 0.27
TVP23B-204ENST00000571018 NLGN1Q8N2Q7 840 aa16.72■□□□□ 0.27
TVP23B-204ENST00000571018 RUNDC1Q96C34 613 aa16.72■□□□□ 0.27
TVP23B-204ENST00000571018 SOS1Q07889 1333 aaPredicted RBP16.71■□□□□ 0.27
TVP23B-204ENST00000571018 RIPK4P57078 832 aa16.71■□□□□ 0.27
TVP23B-204ENST00000571018 CCDC146Q8IYE0 955 aa16.71■□□□□ 0.27
TVP23B-204ENST00000571018 PNISRQ8TF01 805 aaKnown RBP16.71■□□□□ 0.27
TVP23B-204ENST00000571018 ZBTB1Q9Y2K1 713 aa16.71■□□□□ 0.27
TVP23B-204ENST00000571018 GYS1P13807 737 aa16.7■□□□□ 0.26
TVP23B-204ENST00000571018 THUMPD2Q9BTF0 503 aaKnown RBP16.7■□□□□ 0.26
TVP23B-204ENST00000571018 ANP32CO43423 234 aa16.69■□□□□ 0.26
TVP23B-204ENST00000571018 LMOD3Q0VAK6 560 aa16.69■□□□□ 0.26
TVP23B-204ENST00000571018 KLHL34Q8N239 644 aa16.69■□□□□ 0.26
TVP23B-204ENST00000571018 MIS18AQ9NYP9 233 aa16.69■□□□□ 0.26
TVP23B-204ENST00000571018 USP42Q9H9J4 1324 aaKnown RBP16.69■□□□□ 0.26
TVP23B-204ENST00000571018 C4AP0C0L4 1744 aa16.68■□□□□ 0.26
TVP23B-204ENST00000571018 SNRPA1P09661 255 aaKnown RBP16.68■□□□□ 0.26
TVP23B-204ENST00000571018 CANXP27824 592 aaKnown RBP16.68■□□□□ 0.26
TVP23B-204ENST00000571018 CCDC184Q52MB2 194 aa16.68■□□□□ 0.26
TVP23B-204ENST00000571018 SRP68Q9UHB9 627 aaKnown RBP16.68■□□□□ 0.26
TVP23B-204ENST00000571018 CD2APQ9Y5K6 639 aa16.68■□□□□ 0.26
TVP23B-204ENST00000571018 MMP10P09238 476 aa16.67■□□□□ 0.26
TVP23B-204ENST00000571018 EIF5P55010 431 aaKnown RBP16.67■□□□□ 0.26
TVP23B-204ENST00000571018 RRP7AQ9Y3A4 280 aaKnown RBP16.67■□□□□ 0.26
TVP23B-204ENST00000571018 USP16Q9Y5T5 823 aa16.67■□□□□ 0.26
TVP23B-204ENST00000571018 COL15A1P39059 1388 aa16.66■□□□□ 0.26
TVP23B-204ENST00000571018 PRAMEF22A3QJZ6 481 aa16.66■□□□□ 0.26
TVP23B-204ENST00000571018 NEUROD2Q15784 382 aa16.66■□□□□ 0.26
TVP23B-204ENST00000571018 NARFQ9UHQ1 456 aa16.66■□□□□ 0.26
TVP23B-204ENST00000571018 ZPR1O75312 459 aa16.65■□□□□ 0.26
TVP23B-204ENST00000571018 A1BGP04217 495 aa16.65■□□□□ 0.26
TVP23B-204ENST00000571018 IL6STP40189 918 aaPredicted RBP16.65■□□□□ 0.26
TVP23B-204ENST00000571018 FKBP8Q14318 412 aa16.65■□□□□ 0.26
TVP23B-204ENST00000571018 NLGN2Q8NFZ4 835 aa16.65■□□□□ 0.26
TVP23B-204ENST00000571018 EIF4A1P60842 406 aaKnown RBP16.64■□□□□ 0.25
TVP23B-204ENST00000571018 USPL1Q5W0Q7 1092 aa16.64■□□□□ 0.25
TVP23B-204ENST00000571018 BABAM1Q9NWV8 329 aa16.64■□□□□ 0.25
TVP23B-204ENST00000571018 TRIM35Q9UPQ4 493 aa16.64■□□□□ 0.25
TVP23B-204ENST00000571018 KDM3BQ7LBC6 1761 aa16.64■□□□□ 0.25
TVP23B-204ENST00000571018 A0A087WZG4 1122 aa16.63■□□□□ 0.25
TVP23B-204ENST00000571018 PARP3Q9Y6F1 533 aa16.63■□□□□ 0.25
TVP23B-204ENST00000571018 APAF1O14727 1248 aa16.62■□□□□ 0.25
TVP23B-204ENST00000571018 GIGYF1O75420 1035 aaPredicted RBP16.62■□□□□ 0.25
TVP23B-204ENST00000571018 TM4SF1P30408 202 aa16.62■□□□□ 0.25
TVP23B-204ENST00000571018 BCL2L12Q9HB09 334 aa16.62■□□□□ 0.25
TVP23B-204ENST00000571018 TSPYL4Q9UJ04 414 aa16.62■□□□□ 0.25
TVP23B-204ENST00000571018 MRS2Q9HD23 443 aa16.61■□□□□ 0.25
TVP23B-204ENST00000571018 ZBTB12Q9Y330 459 aaPredicted RBP16.61■□□□□ 0.25
TVP23B-204ENST00000571018 DDR1Q08345 913 aa16.6■□□□□ 0.25
TVP23B-204ENST00000571018 NPM2Q86SE8 214 aaKnown RBP16.6■□□□□ 0.25
TVP23B-204ENST00000571018 ZNF330Q9Y3S2 320 aaPredicted RBP16.6■□□□□ 0.25
TVP23B-204ENST00000571018 NBPF26B4DH59 902 aa16.59■□□□□ 0.25
TVP23B-204ENST00000571018 CHL1O00533 1208 aa16.59■□□□□ 0.25
TVP23B-204ENST00000571018 PIP4K2AP48426 406 aaPredicted RBP16.59■□□□□ 0.25
TVP23B-204ENST00000571018 GPR162Q16538 588 aa16.59■□□□□ 0.25
TVP23B-204ENST00000571018 NBPF10Q6P3W6 841 aaKnown RBP16.59■□□□□ 0.25
TVP23B-204ENST00000571018 NBPF15Q8N660 670 aa16.59■□□□□ 0.25
TVP23B-204ENST00000571018 TBC1D2BQ9UPU7 963 aa16.59■□□□□ 0.25
TVP23B-204ENST00000571018 POLRMTO00411 1230 aaKnown RBP16.58■□□□□ 0.24
TVP23B-204ENST00000571018 NFIXQ14938 502 aa16.58■□□□□ 0.24
TVP23B-204ENST00000571018 C10orf71Q711Q0 1435 aa16.58■□□□□ 0.24
TVP23B-204ENST00000571018 TGFB2P61812 414 aa16.57■□□□□ 0.24
TVP23B-204ENST00000571018 MKRN4PQ13434 485 aaPredicted RBP16.57■□□□□ 0.24
TVP23B-204ENST00000571018 DZIP3Q86Y13 1208 aaKnown RBP16.57■□□□□ 0.24
TVP23B-204ENST00000571018 LAMB4A4D0S4 1761 aa16.56■□□□□ 0.24
TVP23B-204ENST00000571018 CAMTA2O94983 1202 aa16.56■□□□□ 0.24
TVP23B-204ENST00000571018 PELP1Q8IZL8 1130 aaKnown RBP16.56■□□□□ 0.24
TVP23B-204ENST00000571018 KIF13BQ9NQT8 1826 aa16.56■□□□□ 0.24
TVP23B-204ENST00000571018 CFAP44Q96MT7 982 aa16.55■□□□□ 0.24
TVP23B-204ENST00000571018 LAS1LQ9Y4W2 734 aaKnown RBP16.55■□□□□ 0.24
TVP23B-204ENST00000571018 PXDNLA1KZ92 1463 aa16.54■□□□□ 0.24
TVP23B-204ENST00000571018 ERBB4Q15303 1308 aa16.54■□□□□ 0.24
TVP23B-204ENST00000571018 SCN7AQ01118 1682 aa16.54■□□□□ 0.24
TVP23B-204ENST00000571018 RGL2O15211 777 aa16.54■□□□□ 0.24
TVP23B-204ENST00000571018 SERPINB2P05120 415 aa16.54■□□□□ 0.24
TVP23B-204ENST00000571018 YBX3P16989 372 aaKnown RBP eCLIP16.54■□□□□ 0.24
TVP23B-204ENST00000571018 CALD1Q05682 793 aaKnown RBP16.54■□□□□ 0.24
TVP23B-204ENST00000571018 TBC1D9BQ66K14 1250 aa16.54■□□□□ 0.24
TVP23B-204ENST00000571018 GRIN3BO60391 1043 aa16.53■□□□□ 0.24
TVP23B-204ENST00000571018 ZNF853P0CG23 659 aa16.53■□□□□ 0.24
TVP23B-204ENST00000571018 CLEC4GQ6UXB4 293 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms