RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-209ENST00000569243 XAGE2Q96GT9 111 aa8.63□□□□□ -1.03
UBR1-209ENST00000569243 DDRGK1Q96HY6 314 aa8.63□□□□□ -1.03
UBR1-209ENST00000569243 FBXO45P0C2W1 286 aa8.62□□□□□ -1.03
UBR1-209ENST00000569243 MAPTP10636 758 aaKnown RBP8.62□□□□□ -1.03
UBR1-209ENST00000569243 SKIV2LQ15477 1246 aaKnown RBP8.62□□□□□ -1.03
UBR1-209ENST00000569243 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.62□□□□□ -1.03
UBR1-209ENST00000569243 H2AFB1P0C5Y9 115 aa8.61□□□□□ -1.03
UBR1-209ENST00000569243 H2AFB2P0C5Z0 115 aa8.61□□□□□ -1.03
UBR1-209ENST00000569243 GRIK4Q16099 956 aa8.61□□□□□ -1.03
UBR1-209ENST00000569243 FAM182BQ5T319 152 aa8.61□□□□□ -1.03
UBR1-209ENST00000569243 RHBDD1Q8TEB9 315 aa8.61□□□□□ -1.03
UBR1-209ENST00000569243 NACC1Q96RE7 527 aa8.61□□□□□ -1.03
UBR1-209ENST00000569243 PRR12Q9ULL5 1215 aa8.61□□□□□ -1.03
UBR1-209ENST00000569243 TNP2Q05952 138 aa8.6□□□□□ -1.03
UBR1-209ENST00000569243 TBC1D9Q6ZT07 1266 aa8.6□□□□□ -1.03
UBR1-209ENST00000569243 KHNYNO15037 678 aaKnown RBP8.59□□□□□ -1.03
UBR1-209ENST00000569243 PLA2G4AP47712 749 aa8.59□□□□□ -1.03
UBR1-209ENST00000569243 TRIM28Q13263 835 aaKnown RBP8.59□□□□□ -1.03
UBR1-209ENST00000569243 SH3D19Q5HYK7 790 aa8.59□□□□□ -1.03
UBR1-209ENST00000569243 ZNF468Q5VIY5 522 aaPredicted RBP8.59□□□□□ -1.03
UBR1-209ENST00000569243 NLRP8Q86W28 1048 aa8.59□□□□□ -1.03
UBR1-209ENST00000569243 TRIM34Q9BYJ4 488 aa8.59□□□□□ -1.03
UBR1-209ENST00000569243 KDM4CQ9H3R0 1056 aa8.59□□□□□ -1.03
UBR1-209ENST00000569243 PAX4O43316 350 aa8.58□□□□□ -1.04
UBR1-209ENST00000569243 ALAS2P22557 587 aa8.58□□□□□ -1.04
UBR1-209ENST00000569243 ELOA3CA0A087WX78 387 aaPredicted RBP8.57□□□□□ -1.04
UBR1-209ENST00000569243 ELOA3DA6NLF2 546 aaPredicted RBP8.57□□□□□ -1.04
UBR1-209ENST00000569243 YBX3P16989 372 aaKnown RBP eCLIP8.57□□□□□ -1.04
UBR1-209ENST00000569243 TXKP42681 527 aa8.57□□□□□ -1.04
UBR1-209ENST00000569243 ELOA3BQ3SY89 546 aa8.57□□□□□ -1.04
UBR1-209ENST00000569243 PPARGC1BQ86YN6 1023 aaKnown RBP8.57□□□□□ -1.04
UBR1-209ENST00000569243 ELOA3Q8NG57 546 aa8.57□□□□□ -1.04
UBR1-209ENST00000569243 ATP4AP20648 1035 aa8.56□□□□□ -1.04
UBR1-209ENST00000569243 M0R082 166 aa8.55□□□□□ -1.04
UBR1-209ENST00000569243 MYCP01106 439 aaPredicted RBP8.55□□□□□ -1.04
UBR1-209ENST00000569243 ESCO1Q5FWF5 840 aa8.55□□□□□ -1.04
UBR1-209ENST00000569243 ZNF417Q8TAU3 575 aa8.55□□□□□ -1.04
UBR1-209ENST00000569243 AIDAQ96BJ3 306 aa8.55□□□□□ -1.04
UBR1-209ENST00000569243 ZNF587Q96SQ5 575 aaPredicted RBP8.55□□□□□ -1.04
UBR1-209ENST00000569243 A0A1W2PNR3 127 aa8.54□□□□□ -1.04
UBR1-209ENST00000569243 STAU1O95793 577 aaKnown RBP8.54□□□□□ -1.04
UBR1-209ENST00000569243 COL9A3Q14050 684 aaPredicted RBP8.54□□□□□ -1.04
UBR1-209ENST00000569243 TLR1Q15399 786 aa8.54□□□□□ -1.04
UBR1-209ENST00000569243 CDCA7Q9BWT1 371 aaPredicted RBP8.54□□□□□ -1.04
UBR1-209ENST00000569243 FAM117AQ9C073 453 aa8.54□□□□□ -1.04
UBR1-209ENST00000569243 GOPCQ9HD26 462 aa8.54□□□□□ -1.04
UBR1-209ENST00000569243 ELNP15502 786 aa8.53□□□□□ -1.04
UBR1-209ENST00000569243 ARSJQ5FYB0 599 aaPredicted RBP8.53□□□□□ -1.04
UBR1-209ENST00000569243 C8orf86Q6ZUL3 223 aa8.53□□□□□ -1.04
UBR1-209ENST00000569243 C1orf216Q8TAB5 229 aa8.53□□□□□ -1.04
UBR1-209ENST00000569243 GPBP1L1Q9HC44 474 aaPredicted RBP8.53□□□□□ -1.04
UBR1-209ENST00000569243 COL17A1Q9UMD9 1497 aaPredicted RBP8.52□□□□□ -1.05
UBR1-209ENST00000569243 C9orf172C9J069 976 aa8.52□□□□□ -1.05
UBR1-209ENST00000569243 MCCD1P59942 119 aaPredicted RBP8.52□□□□□ -1.05
UBR1-209ENST00000569243 MBTPS1Q14703 1052 aa8.52□□□□□ -1.05
UBR1-209ENST00000569243 TP53INP1Q96A56 240 aa8.52□□□□□ -1.05
UBR1-209ENST00000569243 ADGRE1Q14246 886 aa8.51□□□□□ -1.05
UBR1-209ENST00000569243 SYT9Q86SS6 491 aa8.51□□□□□ -1.05
UBR1-209ENST00000569243 STRN4Q9NRL3 753 aa8.51□□□□□ -1.05
UBR1-209ENST00000569243 MARK1Q9P0L2 795 aa8.51□□□□□ -1.05
UBR1-209ENST00000569243 TXNRD3Q86VQ6 643 aa8.5□□□□□ -1.05
UBR1-209ENST00000569243 ETNK1Q9HBU6 452 aa8.5□□□□□ -1.05
UBR1-209ENST00000569243 ARID1BQ8NFD5 2236 aaPredicted RBP8.49□□□□□ -1.05
UBR1-209ENST00000569243 FAM157BP0CG42 384 aa8.49□□□□□ -1.05
UBR1-209ENST00000569243 FMNL2Q96PY5 1086 aa8.49□□□□□ -1.05
UBR1-209ENST00000569243 MDFIQ99750 246 aa8.49□□□□□ -1.05
UBR1-209ENST00000569243 ALBP02768 609 aa8.48□□□□□ -1.05
UBR1-209ENST00000569243 NID1P14543 1247 aa8.48□□□□□ -1.05
UBR1-209ENST00000569243 SELPP16109 830 aa8.48□□□□□ -1.05
UBR1-209ENST00000569243 NR1H3Q13133 447 aa8.48□□□□□ -1.05
UBR1-209ENST00000569243 MICALL1Q8N3F8 863 aa8.48□□□□□ -1.05
UBR1-209ENST00000569243 CCDC85AQ96PX6 553 aaPredicted RBP8.48□□□□□ -1.05
UBR1-209ENST00000569243 PRDM6Q9NQX0 595 aa8.48□□□□□ -1.05
UBR1-209ENST00000569243 STARD13Q9Y3M8 1113 aa8.48□□□□□ -1.05
UBR1-209ENST00000569243 GJA3Q9Y6H8 435 aa8.48□□□□□ -1.05
UBR1-209ENST00000569243 RFC5P40937 340 aa8.47□□□□□ -1.05
UBR1-209ENST00000569243 TRAPPC3LQ5T215 181 aa8.47□□□□□ -1.05
UBR1-209ENST00000569243 ZNF592Q92610 1267 aa8.47□□□□□ -1.05
UBR1-209ENST00000569243 RNF112Q9ULX5 631 aa8.47□□□□□ -1.05
UBR1-209ENST00000569243 NIFKQ9BYG3 293 aaKnown RBP8.46□□□□□ -1.06
UBR1-209ENST00000569243 ADARB2-AS1A8MUL3 147 aa8.45□□□□□ -1.06
UBR1-209ENST00000569243 FZD5Q13467 585 aa8.45□□□□□ -1.06
UBR1-209ENST00000569243 SHISA2Q6UWI4 295 aa8.45□□□□□ -1.06
UBR1-209ENST00000569243 ZNF330Q9Y3S2 320 aaPredicted RBP8.45□□□□□ -1.06
UBR1-209ENST00000569243 SIN3BO75182 1162 aa8.44□□□□□ -1.06
UBR1-209ENST00000569243 NBPF1Q3BBV0 1214 aa8.44□□□□□ -1.06
UBR1-209ENST00000569243 ZIC5Q96T25 663 aa8.44□□□□□ -1.06
UBR1-209ENST00000569243 KRTAP4-9Q9BYQ8 210 aa8.44□□□□□ -1.06
UBR1-209ENST00000569243 PCMTD2Q9NV79 361 aa8.44□□□□□ -1.06
UBR1-209ENST00000569243 EFSO43281 561 aa8.43□□□□□ -1.06
UBR1-209ENST00000569243 NRG1Q02297 640 aaPredicted RBP8.43□□□□□ -1.06
UBR1-209ENST00000569243 LENG1Q96BZ8 264 aaPredicted RBP8.43□□□□□ -1.06
UBR1-209ENST00000569243 GJD4Q96KN9 370 aaPredicted RBP8.43□□□□□ -1.06
UBR1-209ENST00000569243 TATP17735 454 aaPredicted RBP8.42□□□□□ -1.06
UBR1-209ENST00000569243 LAMC2Q13753 1193 aa8.42□□□□□ -1.06
UBR1-209ENST00000569243 TMEM259Q4ZIN3 620 aa8.42□□□□□ -1.06
UBR1-209ENST00000569243 A0A0A0MRY4 1105 aa8.41□□□□□ -1.06
UBR1-209ENST00000569243 PCMTD1Q96MG8 357 aaPredicted RBP8.41□□□□□ -1.06
UBR1-209ENST00000569243 SSBP4Q9BWG4 385 aaPredicted RBP8.41□□□□□ -1.06
UBR1-209ENST00000569243 IRAK1P51617 712 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms