RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 CCDC87Q9NVE4 849 aa9.61□□□□□ -0.87
UBR1-208ENST00000569066 Q6ZVU0 165 aa9.6□□□□□ -0.87
UBR1-208ENST00000569066 EML1O00423 815 aa9.59□□□□□ -0.87
UBR1-208ENST00000569066 TIMP2P16035 220 aa9.59□□□□□ -0.87
UBR1-208ENST00000569066 ERCC3P19447 782 aa9.59□□□□□ -0.87
UBR1-208ENST00000569066 EIF1AXP47813 144 aaKnown RBP9.59□□□□□ -0.87
UBR1-208ENST00000569066 NPR3P17342 541 aa9.59□□□□□ -0.87
UBR1-208ENST00000569066 CENPCQ03188 943 aa9.59□□□□□ -0.87
UBR1-208ENST00000569066 TMC7Q7Z402 723 aa9.58□□□□□ -0.88
UBR1-208ENST00000569066 FBXO33Q7Z6M2 555 aa9.58□□□□□ -0.88
UBR1-208ENST00000569066 ZNF232Q9UNY5 417 aa9.58□□□□□ -0.88
UBR1-208ENST00000569066 HCN4Q9Y3Q4 1203 aa9.58□□□□□ -0.88
UBR1-208ENST00000569066 SNIP1Q8TAD8 396 aaKnown RBP9.58□□□□□ -0.88
UBR1-208ENST00000569066 CDK2AP1O14519 115 aa9.57□□□□□ -0.88
UBR1-208ENST00000569066 GDF9O60383 454 aa9.57□□□□□ -0.88
UBR1-208ENST00000569066 FAM13AO94988 1023 aa9.57□□□□□ -0.88
UBR1-208ENST00000569066 PTGIRP43119 386 aa9.57□□□□□ -0.88
UBR1-208ENST00000569066 CABP1Q9NZU7 370 aa9.57□□□□□ -0.88
UBR1-208ENST00000569066 TTC24A2A3L6 582 aaPredicted RBP9.57□□□□□ -0.88
UBR1-208ENST00000569066 FZD6O60353 706 aa9.57□□□□□ -0.88
UBR1-208ENST00000569066 L3MBTL2Q969R5 705 aa9.57□□□□□ -0.88
UBR1-208ENST00000569066 KLRG1Q96E93 195 aa9.57□□□□□ -0.88
UBR1-208ENST00000569066 KLK14Q9P0G3 267 aa9.57□□□□□ -0.88
UBR1-208ENST00000569066 STIM2Q9P246 746 aa9.57□□□□□ -0.88
UBR1-208ENST00000569066 IFFO2Q5TF58 517 aa9.56□□□□□ -0.88
UBR1-208ENST00000569066 POTEAQ6S8J7 498 aa9.56□□□□□ -0.88
UBR1-208ENST00000569066 TRIM67Q6ZTA4 783 aa9.56□□□□□ -0.88
UBR1-208ENST00000569066 STAG2Q8N3U4 1231 aa9.56□□□□□ -0.88
UBR1-208ENST00000569066 SERTM1A2A2V5 107 aa9.56□□□□□ -0.88
UBR1-208ENST00000569066 NOS2P35228 1153 aa9.56□□□□□ -0.88
UBR1-208ENST00000569066 ALDH16A1Q8IZ83 802 aa9.56□□□□□ -0.88
UBR1-208ENST00000569066 RGL4Q8IZJ4 473 aa9.56□□□□□ -0.88
UBR1-208ENST00000569066 A0A0G2JS52 829 aa9.55□□□□□ -0.88
UBR1-208ENST00000569066 SMPD1P17405 629 aa9.55□□□□□ -0.88
UBR1-208ENST00000569066 AAMPQ13685 434 aa9.55□□□□□ -0.88
UBR1-208ENST00000569066 ETFBKMTQ8IXQ9 262 aa9.55□□□□□ -0.88
UBR1-208ENST00000569066 PLA2G2EQ9NZK7 142 aa9.55□□□□□ -0.88
UBR1-208ENST00000569066 P4HBP07237 508 aaKnown RBP9.54□□□□□ -0.88
UBR1-208ENST00000569066 HPS1Q92902 700 aa9.54□□□□□ -0.88
UBR1-208ENST00000569066 DGKZQ13574 1117 aa9.54□□□□□ -0.88
UBR1-208ENST00000569066 TOR4AQ9NXH8 423 aa9.54□□□□□ -0.88
UBR1-208ENST00000569066 TXLNAP40222 546 aa9.53□□□□□ -0.88
UBR1-208ENST00000569066 ZSCAN29Q8IWY8 852 aaPredicted RBP9.53□□□□□ -0.88
UBR1-208ENST00000569066 TRIM52Q96A61 297 aa9.53□□□□□ -0.88
UBR1-208ENST00000569066 NLRP3Q96P20 1036 aa9.53□□□□□ -0.88
UBR1-208ENST00000569066 ZSCAN10Q96SZ4 725 aaPredicted RBP9.53□□□□□ -0.88
UBR1-208ENST00000569066 INSM2Q96T92 566 aaPredicted RBP9.53□□□□□ -0.88
UBR1-208ENST00000569066 CYP4X1Q8N118 509 aa9.53□□□□□ -0.88
UBR1-208ENST00000569066 PHACTR1Q9C0D0 580 aa9.53□□□□□ -0.88
UBR1-208ENST00000569066 IGHA2P01877 340 aa9.52□□□□□ -0.89
UBR1-208ENST00000569066 PPARGC1BQ86YN6 1023 aaKnown RBP9.52□□□□□ -0.89
UBR1-208ENST00000569066 MEIOBQ8N635 442 aa9.52□□□□□ -0.89
UBR1-208ENST00000569066 TMC1Q8TDI8 760 aa9.52□□□□□ -0.89
UBR1-208ENST00000569066 MYO19Q96H55 970 aa9.52□□□□□ -0.89
UBR1-208ENST00000569066 RBCK1Q9BYM8 510 aa9.52□□□□□ -0.89
UBR1-208ENST00000569066 RNF19AQ9NV58 838 aa9.52□□□□□ -0.89
UBR1-208ENST00000569066 GPR182O15218 404 aa9.52□□□□□ -0.89
UBR1-208ENST00000569066 NDUFB5O43674 189 aa9.52□□□□□ -0.89
UBR1-208ENST00000569066 TEAD4Q15561 434 aa9.52□□□□□ -0.89
UBR1-208ENST00000569066 IGSF5Q9NSI5 407 aa9.52□□□□□ -0.89
UBR1-208ENST00000569066 BRPF3Q9ULD4 1205 aa9.52□□□□□ -0.89
UBR1-208ENST00000569066 SETDB2Q96T68 719 aa9.51□□□□□ -0.89
UBR1-208ENST00000569066 CHMP3Q9Y3E7 222 aa9.51□□□□□ -0.89
UBR1-208ENST00000569066 HIRAP54198 1017 aaPredicted RBP9.51□□□□□ -0.89
UBR1-208ENST00000569066 TMEM214Q6NUQ4 689 aaKnown RBP9.51□□□□□ -0.89
UBR1-208ENST00000569066 TREHO43280 583 aa9.5□□□□□ -0.89
UBR1-208ENST00000569066 PLA2G4AP47712 749 aa9.5□□□□□ -0.89
UBR1-208ENST00000569066 NBPF15Q8N660 670 aa9.5□□□□□ -0.89
UBR1-208ENST00000569066 BCS1LQ9Y276 419 aa9.5□□□□□ -0.89
UBR1-208ENST00000569066 V9GY48 417 aaPredicted RBP9.5□□□□□ -0.89
UBR1-208ENST00000569066 IGSF3O75054 1194 aa9.49□□□□□ -0.89
UBR1-208ENST00000569066 FAM161BQ96MY7 647 aa9.49□□□□□ -0.89
UBR1-208ENST00000569066 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.49□□□□□ -0.89
UBR1-208ENST00000569066 POLIQ9UNA4 740 aa9.49□□□□□ -0.89
UBR1-208ENST00000569066 CTSOP43234 321 aaPredicted RBP9.49□□□□□ -0.89
UBR1-208ENST00000569066 PHKA2P46019 1235 aa9.49□□□□□ -0.89
UBR1-208ENST00000569066 DNM1Q05193 864 aaKnown RBP9.49□□□□□ -0.89
UBR1-208ENST00000569066 EAPPQ56P03 285 aaPredicted RBP9.49□□□□□ -0.89
UBR1-208ENST00000569066 NIFKQ9BYG3 293 aaKnown RBP9.49□□□□□ -0.89
UBR1-208ENST00000569066 RTN1Q16799 776 aa9.48□□□□□ -0.89
UBR1-208ENST00000569066 C4orf17Q53FE4 359 aa9.48□□□□□ -0.89
UBR1-208ENST00000569066 ZNF326Q5BKZ1 582 aaKnown RBP9.48□□□□□ -0.89
UBR1-208ENST00000569066 SLC27A3Q5K4L6 730 aa9.48□□□□□ -0.89
UBR1-208ENST00000569066 MAPK8P45983 427 aa9.48□□□□□ -0.89
UBR1-208ENST00000569066 RHBDD1Q8TEB9 315 aa9.48□□□□□ -0.89
UBR1-208ENST00000569066 BRD2P25440 801 aaKnown RBP9.47□□□□□ -0.89
UBR1-208ENST00000569066 WWC3Q9ULE0 1092 aa9.47□□□□□ -0.89
UBR1-208ENST00000569066 A6NHS1 94 aa9.47□□□□□ -0.89
UBR1-208ENST00000569066 ZAP70P43403 619 aa9.47□□□□□ -0.89
UBR1-208ENST00000569066 FMR1Q06787 632 aaKnown RBP eCLIP9.47□□□□□ -0.89
UBR1-208ENST00000569066 IFT43Q96FT9 208 aa9.47□□□□□ -0.89
UBR1-208ENST00000569066 GRIP2Q9C0E4 1043 aa9.47□□□□□ -0.89
UBR1-208ENST00000569066 RECKO95980 971 aa9.46□□□□□ -0.9
UBR1-208ENST00000569066 EHHADHQ08426 723 aa9.46□□□□□ -0.9
UBR1-208ENST00000569066 DSC3Q14574 896 aa9.46□□□□□ -0.9
UBR1-208ENST00000569066 LINC00528Q8N1L1 170 aa9.46□□□□□ -0.9
UBR1-208ENST00000569066 ABTB2Q8N961 1025 aa9.46□□□□□ -0.9
UBR1-208ENST00000569066 EDEM1Q92611 657 aa9.46□□□□□ -0.9
UBR1-208ENST00000569066 AIDAQ96BJ3 306 aa9.46□□□□□ -0.9
UBR1-208ENST00000569066 FAM129BQ96TA1 746 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms