RNA–Protein interactions for RNA: ENST00000568519.5

NEIL1-219, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 771 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-219ENST00000568519 NEUROD2Q15784 382 aa18.58■□□□□ 0.56
NEIL1-219ENST00000568519 COL5A3P25940 1745 aaPredicted RBP18.57■□□□□ 0.56
NEIL1-219ENST00000568519 IL16Q14005 1332 aa18.56■□□□□ 0.56
NEIL1-219ENST00000568519 TJP1Q07157 1748 aa18.55■□□□□ 0.56
NEIL1-219ENST00000568519 WWC1Q8IX03 1113 aa18.55■□□□□ 0.56
NEIL1-219ENST00000568519 CFAP44Q96MT7 982 aa18.55■□□□□ 0.56
NEIL1-219ENST00000568519 FMNL2Q96PY5 1086 aa18.55■□□□□ 0.56
NEIL1-219ENST00000568519 TEX13AQ9BXU3 409 aaPredicted RBP18.55■□□□□ 0.56
NEIL1-219ENST00000568519 IFT57Q9NWB7 429 aa18.55■□□□□ 0.56
NEIL1-219ENST00000568519 HEG1Q9ULI3 1381 aa18.55■□□□□ 0.56
NEIL1-219ENST00000568519 C4BP0C0L5 1744 aa18.54■□□□□ 0.56
NEIL1-219ENST00000568519 CHL1O00533 1208 aa18.54■□□□□ 0.56
NEIL1-219ENST00000568519 ATP6V1AP38606 617 aa18.54■□□□□ 0.56
NEIL1-219ENST00000568519 SLC39A6Q13433 755 aa18.54■□□□□ 0.56
NEIL1-219ENST00000568519 WDR63Q8IWG1 891 aa18.54■□□□□ 0.56
NEIL1-219ENST00000568519 THUMPD2Q9BTF0 503 aaKnown RBP18.54■□□□□ 0.56
NEIL1-219ENST00000568519 CD2APQ9Y5K6 639 aa18.54■□□□□ 0.56
NEIL1-219ENST00000568519 KIF3CO14782 793 aa18.53■□□□□ 0.56
NEIL1-219ENST00000568519 ZNF853P0CG23 659 aa18.53■□□□□ 0.56
NEIL1-219ENST00000568519 GNAI1P63096 354 aa18.53■□□□□ 0.56
NEIL1-219ENST00000568519 RC3H1Q5TC82 1133 aaKnown RBP18.53■□□□□ 0.56
NEIL1-219ENST00000568519 SLC4A9Q96Q91 983 aa18.53■□□□□ 0.56
NEIL1-219ENST00000568519 RBM42Q9BTD8 480 aaKnown RBP18.53■□□□□ 0.56
NEIL1-219ENST00000568519 CNTNAP4Q9C0A0 1308 aa18.52■□□□□ 0.56
NEIL1-219ENST00000568519 UBR3Q6ZT12 1888 aa18.52■□□□□ 0.56
NEIL1-219ENST00000568519 PTCD1O75127 700 aaKnown RBP18.52■□□□□ 0.56
NEIL1-219ENST00000568519 ZNF496Q96IT1 587 aaPredicted RBP18.52■□□□□ 0.56
NEIL1-219ENST00000568519 PHF14O94880 888 aa18.51■□□□□ 0.55
NEIL1-219ENST00000568519 ITPK1Q13572 414 aa18.51■□□□□ 0.55
NEIL1-219ENST00000568519 TSPYL4Q9UJ04 414 aa18.51■□□□□ 0.55
NEIL1-219ENST00000568519 ZNF521Q96K83 1311 aa18.5■□□□□ 0.55
NEIL1-219ENST00000568519 LAMB4A4D0S4 1761 aa18.5■□□□□ 0.55
NEIL1-219ENST00000568519 SNRPA1P09661 255 aaKnown RBP18.5■□□□□ 0.55
NEIL1-219ENST00000568519 EIF4A1P60842 406 aaKnown RBP18.49■□□□□ 0.55
NEIL1-219ENST00000568519 FLAD1Q8NFF5 587 aa18.49■□□□□ 0.55
NEIL1-219ENST00000568519 SOS1Q07889 1333 aaPredicted RBP18.49■□□□□ 0.55
NEIL1-219ENST00000568519 STARD3NLO95772 234 aa18.48■□□□□ 0.55
NEIL1-219ENST00000568519 HOXB7P09629 217 aa18.48■□□□□ 0.55
NEIL1-219ENST00000568519 LINC00116Q8NCU8 138 aa18.48■□□□□ 0.55
NEIL1-219ENST00000568519 KCNQ3O43525 872 aa18.47■□□□□ 0.55
NEIL1-219ENST00000568519 KIAA1551Q9HCM1 1747 aa18.46■□□□□ 0.55
NEIL1-219ENST00000568519 N4BP2Q86UW6 1770 aaPredicted RBP18.46■□□□□ 0.55
NEIL1-219ENST00000568519 CYP19A1P11511 503 aaPredicted RBP18.46■□□□□ 0.55
NEIL1-219ENST00000568519 ADRA2BP18089 450 aa18.46■□□□□ 0.55
NEIL1-219ENST00000568519 DNAJC10Q8IXB1 793 aa18.46■□□□□ 0.55
NEIL1-219ENST00000568519 AK7Q96M32 723 aa18.46■□□□□ 0.55
NEIL1-219ENST00000568519 MIS18AQ9NYP9 233 aa18.46■□□□□ 0.55
NEIL1-219ENST00000568519 MYH14Q7Z406 1995 aaKnown RBP18.46■□□□□ 0.55
NEIL1-219ENST00000568519 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.45■□□□□ 0.54
NEIL1-219ENST00000568519 SSFA2P28290 1259 aa18.45■□□□□ 0.54
NEIL1-219ENST00000568519 CHMP4AQ9BY43 222 aa18.45■□□□□ 0.54
NEIL1-219ENST00000568519 MBIPQ9NS73 344 aa18.45■□□□□ 0.54
NEIL1-219ENST00000568519 CRKLP46109 303 aaKnown RBP18.44■□□□□ 0.54
NEIL1-219ENST00000568519 DNAJC5GQ8N7S2 189 aa18.44■□□□□ 0.54
NEIL1-219ENST00000568519 CCDC87Q9NVE4 849 aa18.44■□□□□ 0.54
NEIL1-219ENST00000568519 ERBB4Q15303 1308 aa18.44■□□□□ 0.54
NEIL1-219ENST00000568519 RPS6KA4O75676 772 aa18.43■□□□□ 0.54
NEIL1-219ENST00000568519 HTRA3P83110 453 aa18.43■□□□□ 0.54
NEIL1-219ENST00000568519 MYH16Q9H6N6 1097 aa18.43■□□□□ 0.54
NEIL1-219ENST00000568519 INTS5Q6P9B9 1019 aaKnown RBP18.42■□□□□ 0.54
NEIL1-219ENST00000568519 RTCBQ9Y3I0 505 aaKnown RBP18.42■□□□□ 0.54
NEIL1-219ENST00000568519 LAS1LQ9Y4W2 734 aaKnown RBP18.42■□□□□ 0.54
NEIL1-219ENST00000568519 GNPATO15228 680 aa18.41■□□□□ 0.54
NEIL1-219ENST00000568519 GOLGA2Q08379 1002 aa18.41■□□□□ 0.54
NEIL1-219ENST00000568519 NMRK2Q9NPI5 230 aa18.41■□□□□ 0.54
NEIL1-219ENST00000568519 E9PSI1 815 aa18.4■□□□□ 0.54
NEIL1-219ENST00000568519 IL6STP40189 918 aaPredicted RBP18.4■□□□□ 0.54
NEIL1-219ENST00000568519 USP16Q9Y5T5 823 aa18.4■□□□□ 0.54
NEIL1-219ENST00000568519 PXDNLA1KZ92 1463 aa18.39■□□□□ 0.54
NEIL1-219ENST00000568519 SALL2Q9Y467 1007 aaPredicted RBP18.39■□□□□ 0.53
NEIL1-219ENST00000568519 WDR90Q96KV7 1748 aa18.39■□□□□ 0.53
NEIL1-219ENST00000568519 FANCIQ9NVI1 1328 aa18.39■□□□□ 0.53
NEIL1-219ENST00000568519 KIF13BQ9NQT8 1826 aa18.39■□□□□ 0.53
NEIL1-219ENST00000568519 RGL2O15211 777 aa18.38■□□□□ 0.53
NEIL1-219ENST00000568519 APLP1P51693 650 aa18.38■□□□□ 0.53
NEIL1-219ENST00000568519 A0A087WZG4 1122 aa18.37■□□□□ 0.53
NEIL1-219ENST00000568519 A0A0G2JLW4 131 aa18.37■□□□□ 0.53
NEIL1-219ENST00000568519 EIF5P55010 431 aaKnown RBP18.37■□□□□ 0.53
NEIL1-219ENST00000568519 TRAPPC3LQ5T215 181 aa18.37■□□□□ 0.53
NEIL1-219ENST00000568519 ZBTB1Q9Y2K1 713 aa18.37■□□□□ 0.53
NEIL1-219ENST00000568519 ZBED9Q6R2W3 1325 aa18.37■□□□□ 0.53
NEIL1-219ENST00000568519 C4AP0C0L4 1744 aa18.37■□□□□ 0.53
NEIL1-219ENST00000568519 CAPN15O75808 1086 aa18.36■□□□□ 0.53
NEIL1-219ENST00000568519 MMP10P09238 476 aa18.36■□□□□ 0.53
NEIL1-219ENST00000568519 COL15A1P39059 1388 aa18.36■□□□□ 0.53
NEIL1-219ENST00000568519 HNRNPUQ00839 825 aaKnown RBP eCLIP18.36■□□□□ 0.53
NEIL1-219ENST00000568519 COL13A1Q5TAT6 717 aaPredicted RBP18.36■□□□□ 0.53
NEIL1-219ENST00000568519 DUSP27Q5VZP5 1158 aa18.36■□□□□ 0.53
NEIL1-219ENST00000568519 BCS1LQ9Y276 419 aa18.36■□□□□ 0.53
NEIL1-219ENST00000568519 PCNTO95613 3336 aa18.35■□□□□ 0.53
NEIL1-219ENST00000568519 PRAMEF22A3QJZ6 481 aa18.35■□□□□ 0.53
NEIL1-219ENST00000568519 SLFN5Q08AF3 891 aa18.35■□□□□ 0.53
NEIL1-219ENST00000568519 TRMT2AQ8IZ69 625 aaKnown RBP18.35■□□□□ 0.53
NEIL1-219ENST00000568519 TSR2Q969E8 191 aaKnown RBP18.35■□□□□ 0.53
NEIL1-219ENST00000568519 TOMM70O94826 608 aa18.34■□□□□ 0.53
NEIL1-219ENST00000568519 SPINK5Q9NQ38 1064 aaPredicted RBP18.34■□□□□ 0.53
NEIL1-219ENST00000568519 BRCA1P38398 1863 aaKnown RBP18.34■□□□□ 0.53
NEIL1-219ENST00000568519 A1BGP04217 495 aa18.33■□□□□ 0.52
NEIL1-219ENST00000568519 HDGFL1Q5TGJ6 251 aa18.33■□□□□ 0.52
NEIL1-219ENST00000568519 ARHGAP27Q6ZUM4 889 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms