RNA–Protein interactions for RNA: ENST00000568413.1

RPAP1-211, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 586 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-211ENST00000568413 HEG1Q9ULI3 1381 aa11.56□□□□□ -0.56
RPAP1-211ENST00000568413 SNRPA1P09661 255 aaKnown RBP11.56□□□□□ -0.56
RPAP1-211ENST00000568413 ITPK1Q13572 414 aa11.56□□□□□ -0.56
RPAP1-211ENST00000568413 RC3H1Q5TC82 1133 aaKnown RBP11.56□□□□□ -0.56
RPAP1-211ENST00000568413 COL23A1Q86Y22 540 aaPredicted RBP11.56□□□□□ -0.56
RPAP1-211ENST00000568413 ZNF831Q5JPB2 1677 aa11.55□□□□□ -0.56
RPAP1-211ENST00000568413 STARD3NLO95772 234 aa11.55□□□□□ -0.56
RPAP1-211ENST00000568413 POLD1P28340 1107 aa11.55□□□□□ -0.56
RPAP1-211ENST00000568413 AMIGO3Q86WK7 504 aa11.55□□□□□ -0.56
RPAP1-211ENST00000568413 DNAJC10Q8IXB1 793 aa11.55□□□□□ -0.56
RPAP1-211ENST00000568413 ZNF784Q8NCA9 323 aaPredicted RBP11.55□□□□□ -0.56
RPAP1-211ENST00000568413 LINC00116Q8NCU8 138 aa11.55□□□□□ -0.56
RPAP1-211ENST00000568413 MBIPQ9NS73 344 aa11.55□□□□□ -0.56
RPAP1-211ENST00000568413 KCPQ6ZWJ8 1503 aa11.55□□□□□ -0.56
RPAP1-211ENST00000568413 C4BP0C0L5 1744 aa11.55□□□□□ -0.56
RPAP1-211ENST00000568413 GIGYF1O75420 1035 aaPredicted RBP11.54□□□□□ -0.56
RPAP1-211ENST00000568413 HNRNPUQ00839 825 aaKnown RBP eCLIP11.54□□□□□ -0.56
RPAP1-211ENST00000568413 GOLGA2Q08379 1002 aa11.54□□□□□ -0.56
RPAP1-211ENST00000568413 GPR162Q16538 588 aa11.54□□□□□ -0.56
RPAP1-211ENST00000568413 AK7Q96M32 723 aa11.54□□□□□ -0.56
RPAP1-211ENST00000568413 UBR3Q6ZT12 1888 aa11.54□□□□□ -0.56
RPAP1-211ENST00000568413 ZNF521Q96K83 1311 aa11.54□□□□□ -0.56
RPAP1-211ENST00000568413 UBR2Q8IWV8 1755 aa11.54□□□□□ -0.56
RPAP1-211ENST00000568413 CYP19A1P11511 503 aaPredicted RBP11.53□□□□□ -0.56
RPAP1-211ENST00000568413 CRKLP46109 303 aaKnown RBP11.53□□□□□ -0.56
RPAP1-211ENST00000568413 SLC16A10Q8TF71 515 aa11.53□□□□□ -0.56
RPAP1-211ENST00000568413 MYH16Q9H6N6 1097 aa11.53□□□□□ -0.56
RPAP1-211ENST00000568413 USP16Q9Y5T5 823 aa11.53□□□□□ -0.56
RPAP1-211ENST00000568413 CNTNAP4Q9C0A0 1308 aa11.53□□□□□ -0.56
RPAP1-211ENST00000568413 KDM3BQ7LBC6 1761 aa11.52□□□□□ -0.57
RPAP1-211ENST00000568413 RPS6KA4O75676 772 aa11.52□□□□□ -0.57
RPAP1-211ENST00000568413 FLAD1Q8NFF5 587 aa11.52□□□□□ -0.57
RPAP1-211ENST00000568413 CHMP4AQ9BY43 222 aa11.52□□□□□ -0.57
RPAP1-211ENST00000568413 CCDC87Q9NVE4 849 aa11.52□□□□□ -0.57
RPAP1-211ENST00000568413 PRAMEF22A3QJZ6 481 aa11.51□□□□□ -0.57
RPAP1-211ENST00000568413 E9PSI1 815 aa11.51□□□□□ -0.57
RPAP1-211ENST00000568413 PHF14O94880 888 aa11.51□□□□□ -0.57
RPAP1-211ENST00000568413 HOXB7P09629 217 aa11.51□□□□□ -0.57
RPAP1-211ENST00000568413 YBX3P16989 372 aaKnown RBP eCLIP11.51□□□□□ -0.571e-7■■■■□ 21.3
RPAP1-211ENST00000568413 INTS5Q6P9B9 1019 aaKnown RBP11.51□□□□□ -0.57
RPAP1-211ENST00000568413 TSR2Q969E8 191 aaKnown RBP11.51□□□□□ -0.57
RPAP1-211ENST00000568413 RTCBQ9Y3I0 505 aaKnown RBP11.51□□□□□ -0.57
RPAP1-211ENST00000568413 CICQ96RK0 1608 aaPredicted RBP11.5□□□□□ -0.57
RPAP1-211ENST00000568413 GNPATO15228 680 aa11.5□□□□□ -0.57
RPAP1-211ENST00000568413 SSFA2P28290 1259 aa11.5□□□□□ -0.57
RPAP1-211ENST00000568413 TRAPPC3LQ5T215 181 aa11.5□□□□□ -0.57
RPAP1-211ENST00000568413 DUSP27Q5VZP5 1158 aa11.5□□□□□ -0.57
RPAP1-211ENST00000568413 NPM2Q86SE8 214 aaKnown RBP11.5□□□□□ -0.57
RPAP1-211ENST00000568413 SPINK5Q9NQ38 1064 aaPredicted RBP11.5□□□□□ -0.57
RPAP1-211ENST00000568413 WWC3Q9ULE0 1092 aa11.5□□□□□ -0.57
RPAP1-211ENST00000568413 SOS1Q07889 1333 aaPredicted RBP11.5□□□□□ -0.57
RPAP1-211ENST00000568413 A1BGP04217 495 aa11.49□□□□□ -0.57
RPAP1-211ENST00000568413 ADRA2BP18089 450 aa11.49□□□□□ -0.57
RPAP1-211ENST00000568413 EIF2S2P20042 333 aaKnown RBP11.49□□□□□ -0.57
RPAP1-211ENST00000568413 CANXP27824 592 aaKnown RBP11.49□□□□□ -0.57
RPAP1-211ENST00000568413 SLFN5Q08AF3 891 aa11.49□□□□□ -0.57
RPAP1-211ENST00000568413 KRT24Q2M2I5 525 aa11.49□□□□□ -0.57
RPAP1-211ENST00000568413 C8orf58Q8NAV2 365 aa11.49□□□□□ -0.57
RPAP1-211ENST00000568413 FANCIQ9NVI1 1328 aa11.49□□□□□ -0.57
RPAP1-211ENST00000568413 COL5A3P25940 1745 aaPredicted RBP11.49□□□□□ -0.57
RPAP1-211ENST00000568413 TJP1Q07157 1748 aa11.49□□□□□ -0.57
RPAP1-211ENST00000568413 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.48□□□□□ -0.57
RPAP1-211ENST00000568413 ELL2O00472 640 aaPredicted RBP11.48□□□□□ -0.57
RPAP1-211ENST00000568413 IL6STP40189 918 aaPredicted RBP11.48□□□□□ -0.57
RPAP1-211ENST00000568413 TRMT2AQ8IZ69 625 aaKnown RBP11.48□□□□□ -0.57
RPAP1-211ENST00000568413 ZBTB1Q9Y2K1 713 aa11.48□□□□□ -0.57
RPAP1-211ENST00000568413 ERBB4Q15303 1308 aa11.48□□□□□ -0.57
RPAP1-211ENST00000568413 MYH14Q7Z406 1995 aaKnown RBP11.48□□□□□ -0.57
RPAP1-211ENST00000568413 ZBED9Q6R2W3 1325 aa11.47□□□□□ -0.57
RPAP1-211ENST00000568413 A0A087WZG4 1122 aa11.47□□□□□ -0.57
RPAP1-211ENST00000568413 RFC4P35249 363 aa11.47□□□□□ -0.57
RPAP1-211ENST00000568413 EIF5P55010 431 aaKnown RBP11.47□□□□□ -0.57
RPAP1-211ENST00000568413 EXOSC9Q06265 439 aaKnown RBP11.47□□□□□ -0.57
RPAP1-211ENST00000568413 TWISTNBQ3B726 338 aaPredicted RBP11.47□□□□□ -0.57
RPAP1-211ENST00000568413 HDGFL1Q5TGJ6 251 aa11.47□□□□□ -0.57
RPAP1-211ENST00000568413 ARHGEF1Q92888 912 aaKnown RBP11.47□□□□□ -0.57
RPAP1-211ENST00000568413 CDCA7LQ96GN5 454 aa11.47□□□□□ -0.57
RPAP1-211ENST00000568413 GOLGB1Q14789 3259 aaKnown RBP11.46□□□□□ -0.57
RPAP1-211ENST00000568413 CCDC30Q5VVM6 783 aa11.46□□□□□ -0.57
RPAP1-211ENST00000568413 TSPYL6Q8N831 410 aa11.46□□□□□ -0.57
RPAP1-211ENST00000568413 NBPF26B4DH59 902 aa11.45□□□□□ -0.58
RPAP1-211ENST00000568413 ZPR1O75312 459 aa11.45□□□□□ -0.58
RPAP1-211ENST00000568413 VAMP4O75379 141 aa11.45□□□□□ -0.58
RPAP1-211ENST00000568413 NBPF10Q6P3W6 841 aaKnown RBP11.45□□□□□ -0.58
RPAP1-211ENST00000568413 NBPF15Q8N660 670 aa11.45□□□□□ -0.58
RPAP1-211ENST00000568413 NECTIN2Q92692 538 aa11.45□□□□□ -0.58
RPAP1-211ENST00000568413 DDX21Q9NR30 783 aaKnown RBP eCLIP11.45□□□□□ -0.58
RPAP1-211ENST00000568413 DBF4Q9UBU7 674 aaPredicted RBP11.45□□□□□ -0.58
RPAP1-211ENST00000568413 ZNF330Q9Y3S2 320 aaPredicted RBP11.45□□□□□ -0.58
RPAP1-211ENST00000568413 MYL6BP14649 208 aa11.44□□□□□ -0.58
RPAP1-211ENST00000568413 PIP4K2AP48426 406 aaPredicted RBP11.44□□□□□ -0.58
RPAP1-211ENST00000568413 PDIA6Q15084 440 aa11.44□□□□□ -0.58
RPAP1-211ENST00000568413 STK31Q9BXU1 1019 aa11.44□□□□□ -0.58
RPAP1-211ENST00000568413 HYPKQ9NX55 129 aa11.44□□□□□ -0.58
RPAP1-211ENST00000568413 NARFQ9UHQ1 456 aa11.44□□□□□ -0.58
RPAP1-211ENST00000568413 LAMB4A4D0S4 1761 aa11.44□□□□□ -0.58
RPAP1-211ENST00000568413 COL15A1P39059 1388 aa11.43□□□□□ -0.58
RPAP1-211ENST00000568413 CT47B1P0C2W7 299 aaPredicted RBP11.43□□□□□ -0.58
RPAP1-211ENST00000568413 NLGN1Q8N2Q7 840 aa11.43□□□□□ -0.58
RPAP1-211ENST00000568413 N4BP2Q86UW6 1770 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms