RNA–Protein interactions for RNA: ENST00000568316.1

RBBP6-211, Transcript of RB binding protein 6, ubiquitin ligase, human

TSL 5

Gene RBBP6, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBBP6-211	ENST00000568316	GNPAT	O15228	680 aa		32.21	■■■□□ 2.75
RBBP6-211	ENST00000568316	CDCA7L	Q96GN5	454 aa		32.21	■■■□□ 2.75
RBBP6-211	ENST00000568316	TFCP2L1	Q9NZI6	479 aa		32.21	■■■□□ 2.75
RBBP6-211	ENST00000568316	R3HDM1	Q15032	1099 aa	Known RBP	32.2	■■■□□ 2.75
RBBP6-211	ENST00000568316	CCDC87	Q9NVE4	849 aa		32.2	■■■□□ 2.75
RBBP6-211	ENST00000568316	LAMB4	A4D0S4	1761 aa		32.19	■■■□□ 2.74
RBBP6-211	ENST00000568316	RC3H1	Q5TC82	1133 aa	Known RBP	32.19	■■■□□ 2.74
RBBP6-211	ENST00000568316	INTS5	Q6P9B9	1019 aa	Known RBP	32.19	■■■□□ 2.74
RBBP6-211	ENST00000568316	SMIM5	Q71RC9	77 aa		32.19	■■■□□ 2.74
RBBP6-211	ENST00000568316	MYH14	Q7Z406	1995 aa	Known RBP	32.19	■■■□□ 2.74
RBBP6-211	ENST00000568316	PSD	A5PKW4	1024 aa	Predicted RBP	32.18	■■■□□ 2.74
RBBP6-211	ENST00000568316		E9PSI1	815 aa		32.18	■■■□□ 2.74
RBBP6-211	ENST00000568316	ELL2	O00472	640 aa	Predicted RBP	32.18	■■■□□ 2.74
RBBP6-211	ENST00000568316	DUSP27	Q5VZP5	1158 aa		32.18	■■■□□ 2.74
RBBP6-211	ENST00000568316	C8orf58	Q8NAV2	365 aa		32.18	■■■□□ 2.74
RBBP6-211	ENST00000568316	A1BG	P04217	495 aa		32.17	■■■□□ 2.74
RBBP6-211	ENST00000568316	SLFN5	Q08AF3	891 aa		32.17	■■■□□ 2.74
RBBP6-211	ENST00000568316	AMIGO3	Q86WK7	504 aa		32.17	■■■□□ 2.74
RBBP6-211	ENST00000568316	ZBTB1	Q9Y2K1	713 aa		32.17	■■■□□ 2.74
RBBP6-211	ENST00000568316	ZBED9	Q6R2W3	1325 aa		32.17	■■■□□ 2.74
RBBP6-211	ENST00000568316	TUBGCP6	Q96RT7	1819 aa		32.16	■■■□□ 2.74
RBBP6-211	ENST00000568316	PHF14	O94880	888 aa		32.16	■■■□□ 2.74
RBBP6-211	ENST00000568316	EIF2S2	P20042	333 aa	Known RBP	32.16	■■■□□ 2.74
RBBP6-211	ENST00000568316	CANX	P27824	592 aa	Known RBP	32.15	■■■□□ 2.74
RBBP6-211	ENST00000568316	PIP4K2A	P48426	406 aa	Predicted RBP	32.15	■■■□□ 2.74
RBBP6-211	ENST00000568316	TSPYL6	Q8N831	410 aa		32.15	■■■□□ 2.74
RBBP6-211	ENST00000568316	UBR3	Q6ZT12	1888 aa		32.14	■■■□□ 2.74
RBBP6-211	ENST00000568316	NECTIN2	Q92692	538 aa		32.14	■■■□□ 2.74
RBBP6-211	ENST00000568316	RTCB	Q9Y3I0	505 aa	Known RBP	32.14	■■■□□ 2.74
RBBP6-211	ENST00000568316	EXOSC9	Q06265	439 aa	Known RBP	32.13	■■■□□ 2.73
RBBP6-211	ENST00000568316	YTHDC1	Q96MU7	727 aa	Known RBP	32.13	■■■□□ 2.73
RBBP6-211	ENST00000568316	PNPLA7	Q6ZV29	1317 aa		32.12	■■■□□ 2.73
RBBP6-211	ENST00000568316	RPS6KA4	O75676	772 aa		32.12	■■■□□ 2.73
RBBP6-211	ENST00000568316	HOXB7	P09629	217 aa		32.12	■■■□□ 2.73
RBBP6-211	ENST00000568316	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	32.11	■■■□□ 2.73
RBBP6-211	ENST00000568316	HDGFL1	Q5TGJ6	251 aa		32.1	■■■□□ 2.73
RBBP6-211	ENST00000568316	ZNF330	Q9Y3S2	320 aa	Predicted RBP	32.1	■■■□□ 2.73
RBBP6-211	ENST00000568316	SOS1	Q07889	1333 aa	Predicted RBP	32.09	■■■□□ 2.73
RBBP6-211	ENST00000568316	SSFA2	P28290	1259 aa		32.09	■■■□□ 2.73
RBBP6-211	ENST00000568316	TWISTNB	Q3B726	338 aa	Predicted RBP	32.09	■■■□□ 2.73
RBBP6-211	ENST00000568316	PDGFD	Q9GZP0	370 aa	Predicted RBP	32.09	■■■□□ 2.73
RBBP6-211	ENST00000568316	QSER1	Q2KHR3	1735 aa		32.09	■■■□□ 2.73
RBBP6-211	ENST00000568316	NBPF26	B4DH59	902 aa		32.08	■■■□□ 2.73
RBBP6-211	ENST00000568316	MSH5	O43196	834 aa		32.08	■■■□□ 2.73
RBBP6-211	ENST00000568316	NBPF10	Q6P3W6	841 aa	Known RBP	32.08	■■■□□ 2.73
RBBP6-211	ENST00000568316	COL23A1	Q86Y22	540 aa	Predicted RBP	32.08	■■■□□ 2.73
RBBP6-211	ENST00000568316	NBPF15	Q8N660	670 aa		32.08	■■■□□ 2.73
RBBP6-211	ENST00000568316	TRMT2A	Q8IZ69	625 aa	Known RBP	32.07	■■■□□ 2.72
RBBP6-211	ENST00000568316	TRAPPC3L	Q5T215	181 aa		32.05	■■■□□ 2.72
RBBP6-211	ENST00000568316	FLAD1	Q8NFF5	587 aa		32.05	■■■□□ 2.72
RBBP6-211	ENST00000568316	COL15A1	P39059	1388 aa		32.05	■■■□□ 2.72
RBBP6-211	ENST00000568316	MYL6B	P14649	208 aa		32.04	■■■□□ 2.72
RBBP6-211	ENST00000568316	IL6ST	P40189	918 aa	Predicted RBP	32.04	■■■□□ 2.72
RBBP6-211	ENST00000568316	EIF5	P55010	431 aa	Known RBP	32.04	■■■□□ 2.72
RBBP6-211	ENST00000568316	ARHGEF1	Q92888	912 aa	Known RBP	32.04	■■■□□ 2.72
RBBP6-211	ENST00000568316	ERBB4	Q15303	1308 aa		32.03	■■■□□ 2.72
RBBP6-211	ENST00000568316	ANXA1	P04083	346 aa		32.03	■■■□□ 2.72
RBBP6-211	ENST00000568316	ADRA2B	P18089	450 aa		32.03	■■■□□ 2.72
RBBP6-211	ENST00000568316	CHPF2	Q9P2E5	772 aa		32.03	■■■□□ 2.72
RBBP6-211	ENST00000568316	PDIA6	Q15084	440 aa		32.02	■■■□□ 2.72
RBBP6-211	ENST00000568316	PROSER3	Q2NL68	480 aa		32.02	■■■□□ 2.72
RBBP6-211	ENST00000568316	CASZ1	Q86V15	1759 aa		32.02	■■■□□ 2.72
RBBP6-211	ENST00000568316	TCERG1	O14776	1098 aa	Known RBP	32.01	■■■□□ 2.71
RBBP6-211	ENST00000568316	VAMP4	O75379	141 aa		32.01	■■■□□ 2.71
RBBP6-211	ENST00000568316	NPM2	Q86SE8	214 aa	Known RBP	32.01	■■■□□ 2.71
RBBP6-211	ENST00000568316	C4A	P0C0L4	1744 aa		32	■■■□□ 2.71
RBBP6-211	ENST00000568316	RFC4	P35249	363 aa		32	■■■□□ 2.71
RBBP6-211	ENST00000568316	ARX	Q96QS3	562 aa		32	■■■□□ 2.71
RBBP6-211	ENST00000568316	CCDC30	Q5VVM6	783 aa		31.99	■■■□□ 2.71
RBBP6-211	ENST00000568316	DDX21	Q9NR30	783 aa	Known RBP eCLIP	31.99	■■■□□ 2.71
RBBP6-211	ENST00000568316	DBF4	Q9UBU7	674 aa	Predicted RBP	31.98	■■■□□ 2.71
RBBP6-211	ENST00000568316	SRP68	Q9UHB9	627 aa	Known RBP	31.98	■■■□□ 2.71
RBBP6-211	ENST00000568316		A0A087WZG4	1122 aa		31.96	■■■□□ 2.71
RBBP6-211	ENST00000568316	ZBTB7A	O95365	584 aa		31.96	■■■□□ 2.71
RBBP6-211	ENST00000568316	CHMP4A	Q9BY43	222 aa		31.96	■■■□□ 2.71
RBBP6-211	ENST00000568316	TBC1D2B	Q9UPU7	963 aa		31.96	■■■□□ 2.71
RBBP6-211	ENST00000568316	LRP10	Q7Z4F1	713 aa		31.95	■■■□□ 2.71
RBBP6-211	ENST00000568316	USP42	Q9H9J4	1324 aa	Known RBP	31.95	■■■□□ 2.7
RBBP6-211	ENST00000568316	DZIP3	Q86Y13	1208 aa	Known RBP	31.94	■■■□□ 2.7
RBBP6-211	ENST00000568316	STK31	Q9BXU1	1019 aa		31.94	■■■□□ 2.7
RBBP6-211	ENST00000568316	ZPR1	O75312	459 aa		31.93	■■■□□ 2.7
RBBP6-211	ENST00000568316	MSL1	Q68DK7	614 aa		31.93	■■■□□ 2.7
RBBP6-211	ENST00000568316	USPL1	Q5W0Q7	1092 aa		31.92	■■■□□ 2.7
RBBP6-211	ENST00000568316	NARF	Q9UHQ1	456 aa		31.92	■■■□□ 2.7
RBBP6-211	ENST00000568316	AIMP1	Q12904	312 aa	Known RBP	31.91	■■■□□ 2.7
RBBP6-211	ENST00000568316	TTLL7	Q6ZT98	887 aa		31.91	■■■□□ 2.7
RBBP6-211	ENST00000568316	SLC16A10	Q8TF71	515 aa		31.91	■■■□□ 2.7
RBBP6-211	ENST00000568316	XAGE3	Q8WTP9	111 aa		31.91	■■■□□ 2.7
RBBP6-211	ENST00000568316	HYPK	Q9NX55	129 aa		31.91	■■■□□ 2.7
RBBP6-211	ENST00000568316	CAMTA2	O94983	1202 aa		31.89	■■■□□ 2.7
RBBP6-211	ENST00000568316	GYS1	P13807	737 aa		31.89	■■■□□ 2.7
RBBP6-211	ENST00000568316	COPS6	Q7L5N1	327 aa		31.89	■■■□□ 2.7
RBBP6-211	ENST00000568316	MTFR1L	Q9H019	292 aa		31.89	■■■□□ 2.7
RBBP6-211	ENST00000568316	ATF5	Q9Y2D1	282 aa	Predicted RBP	31.89	■■■□□ 2.7
RBBP6-211	ENST00000568316	KIF6	Q6ZMV9	814 aa		31.88	■■■□□ 2.69
RBBP6-211	ENST00000568316	PHAX	Q9H814	394 aa	Known RBP	31.88	■■■□□ 2.69
RBBP6-211	ENST00000568316	SCN7A	Q01118	1682 aa		31.88	■■■□□ 2.69
RBBP6-211	ENST00000568316	SLC4A2	P04920	1241 aa		31.87	■■■□□ 2.69
RBBP6-211	ENST00000568316	ZBTB3	Q9H5J0	574 aa		31.86	■■■□□ 2.69
RBBP6-211	ENST00000568316	BCL2L12	Q9HB09	334 aa		31.86	■■■□□ 2.69

Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms