RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 CRKLP46109 303 aaKnown RBP20.27■□□□□ 0.84
SPG7-218ENST00000568205 HDGFL1Q5TGJ6 251 aa20.27■□□□□ 0.84
SPG7-218ENST00000568205 C5P01031 1676 aa20.26■□□□□ 0.83
SPG7-218ENST00000568205 RREB1Q92766 1687 aa20.26■□□□□ 0.83
SPG7-218ENST00000568205 VAMP4O75379 141 aa20.26■□□□□ 0.83
SPG7-218ENST00000568205 RC3H1Q5TC82 1133 aaKnown RBP20.26■□□□□ 0.83
SPG7-218ENST00000568205 CCDC87Q9NVE4 849 aa20.26■□□□□ 0.83
SPG7-218ENST00000568205 A1BGP04217 495 aa20.25■□□□□ 0.83
SPG7-218ENST00000568205 INTS5Q6P9B9 1019 aaKnown RBP20.25■□□□□ 0.83
SPG7-218ENST00000568205 NECTIN2Q92692 538 aa20.25■□□□□ 0.83
SPG7-218ENST00000568205 CHMP4AQ9BY43 222 aa20.25■□□□□ 0.83
SPG7-218ENST00000568205 CT47B1P0C2W7 299 aaPredicted RBP20.24■□□□□ 0.83
SPG7-218ENST00000568205 AK7Q96M32 723 aa20.24■□□□□ 0.83
SPG7-218ENST00000568205 ZBTB1Q9Y2K1 713 aa20.24■□□□□ 0.83
SPG7-218ENST00000568205 ERBB4Q15303 1308 aa20.24■□□□□ 0.83
SPG7-218ENST00000568205 ZNF827Q17R98 1081 aa20.23■□□□□ 0.83
SPG7-218ENST00000568205 AKT1S1Q96B36 256 aa20.23■□□□□ 0.83
SPG7-218ENST00000568205 ANO8Q9HCE9 1232 aaPredicted RBP20.23■□□□□ 0.83
SPG7-218ENST00000568205 C4BP0C0L5 1744 aa20.22■□□□□ 0.83
SPG7-218ENST00000568205 COL5A3P25940 1745 aaPredicted RBP20.22■□□□□ 0.83
SPG7-218ENST00000568205 NUP188Q5SRE5 1749 aa20.22■□□□□ 0.83
SPG7-218ENST00000568205 LAMB4A4D0S4 1761 aa20.22■□□□□ 0.83
SPG7-218ENST00000568205 NBPF26B4DH59 902 aa20.22■□□□□ 0.83
SPG7-218ENST00000568205 GNPATO15228 680 aa20.22■□□□□ 0.83
SPG7-218ENST00000568205 CANXP27824 592 aaKnown RBP20.22■□□□□ 0.83
SPG7-218ENST00000568205 NBPF14Q5TI25 921 aa20.22■□□□□ 0.83
SPG7-218ENST00000568205 CCDC30Q5VVM6 783 aa20.22■□□□□ 0.83
SPG7-218ENST00000568205 NBPF10Q6P3W6 841 aaKnown RBP20.22■□□□□ 0.83
SPG7-218ENST00000568205 NBPF15Q8N660 670 aa20.22■□□□□ 0.83
SPG7-218ENST00000568205 STK32BQ9NY57 414 aa20.22■□□□□ 0.83
SPG7-218ENST00000568205 PIP4K2AP48426 406 aaPredicted RBP20.21■□□□□ 0.83
SPG7-218ENST00000568205 ZNF428Q96B54 188 aa20.21■□□□□ 0.83
SPG7-218ENST00000568205 CHPF2Q9P2E5 772 aa20.21■□□□□ 0.83
SPG7-218ENST00000568205 RPS6KA4O75676 772 aa20.2■□□□□ 0.82
SPG7-218ENST00000568205 PDIA6Q15084 440 aa20.2■□□□□ 0.82
SPG7-218ENST00000568205 SLC15A2Q16348 729 aa20.2■□□□□ 0.82
SPG7-218ENST00000568205 DDX21Q9NR30 783 aaKnown RBP eCLIP20.2■□□□□ 0.82
SPG7-218ENST00000568205 DBF4Q9UBU7 674 aaPredicted RBP20.2■□□□□ 0.82
SPG7-218ENST00000568205 TAF1LQ8IZX4 1826 aa20.2■□□□□ 0.82
SPG7-218ENST00000568205 TCERG1O14776 1098 aaKnown RBP20.19■□□□□ 0.82
SPG7-218ENST00000568205 IL6STP40189 918 aaPredicted RBP20.19■□□□□ 0.82
SPG7-218ENST00000568205 PROSER3Q2NL68 480 aa20.19■□□□□ 0.82
SPG7-218ENST00000568205 STK31Q9BXU1 1019 aa20.19■□□□□ 0.82
SPG7-218ENST00000568205 TFCP2L1Q9NZI6 479 aa20.19■□□□□ 0.82
SPG7-218ENST00000568205 RTCBQ9Y3I0 505 aaKnown RBP20.19■□□□□ 0.82
SPG7-218ENST00000568205 ANXA1P04083 346 aa20.18■□□□□ 0.82
SPG7-218ENST00000568205 MYL6BP14649 208 aa20.18■□□□□ 0.82
SPG7-218ENST00000568205 EIF5P55010 431 aaKnown RBP20.18■□□□□ 0.82
SPG7-218ENST00000568205 AMIGO3Q86WK7 504 aa20.18■□□□□ 0.82
SPG7-218ENST00000568205 ZNF330Q9Y3S2 320 aaPredicted RBP20.17■□□□□ 0.82
SPG7-218ENST00000568205 SSFA2P28290 1259 aa20.16■□□□□ 0.82
SPG7-218ENST00000568205 ALDH1L2Q3SY69 923 aa20.16■□□□□ 0.82
SPG7-218ENST00000568205 SMIM5Q71RC9 77 aa20.16■□□□□ 0.82
SPG7-218ENST00000568205 LRP10Q7Z4F1 713 aa20.16■□□□□ 0.82
SPG7-218ENST00000568205 SSH1Q8WYL5 1049 aa20.16■□□□□ 0.82
SPG7-218ENST00000568205 HYPKQ9NX55 129 aa20.16■□□□□ 0.82
SPG7-218ENST00000568205 MYH14Q7Z406 1995 aaKnown RBP20.15■□□□□ 0.82
SPG7-218ENST00000568205 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.15■□□□□ 0.82
SPG7-218ENST00000568205 PHF14O94880 888 aa20.15■□□□□ 0.82
SPG7-218ENST00000568205 SLC4A2P04920 1241 aa20.15■□□□□ 0.82
SPG7-218ENST00000568205 ADRA2BP18089 450 aa20.15■□□□□ 0.82
SPG7-218ENST00000568205 RARSP54136 660 aaKnown RBP20.15■□□□□ 0.82
SPG7-218ENST00000568205 NPM2Q86SE8 214 aaKnown RBP20.15■□□□□ 0.82
SPG7-218ENST00000568205 COL15A1P39059 1388 aa20.15■□□□□ 0.82
SPG7-218ENST00000568205 PNPLA7Q6ZV29 1317 aa20.14■□□□□ 0.81
SPG7-218ENST00000568205 A0A087WZG4 1122 aa20.14■□□□□ 0.81
SPG7-218ENST00000568205 TRAPPC3LQ5T215 181 aa20.14■□□□□ 0.81
SPG7-218ENST00000568205 FLAD1Q8NFF5 587 aa20.14■□□□□ 0.81
SPG7-218ENST00000568205 SMC4Q9NTJ3 1288 aa20.14■□□□□ 0.81
SPG7-218ENST00000568205 MRPL50Q8N5N7 158 aaKnown RBP20.13■□□□□ 0.81
SPG7-218ENST00000568205 XAGE3Q8WTP9 111 aa20.13■□□□□ 0.81
SPG7-218ENST00000568205 BCL2L13Q9BXK5 485 aa20.13■□□□□ 0.81
SPG7-218ENST00000568205 ARHGEF1Q92888 912 aaKnown RBP20.12■□□□□ 0.81
SPG7-218ENST00000568205 PHAXQ9H814 394 aaKnown RBP20.12■□□□□ 0.81
SPG7-218ENST00000568205 TTLL7Q6ZT98 887 aa20.11■□□□□ 0.81
SPG7-218ENST00000568205 COPS6Q7L5N1 327 aa20.11■□□□□ 0.81
SPG7-218ENST00000568205 G2E3Q7L622 706 aa20.11■□□□□ 0.81
SPG7-218ENST00000568205 DZIP3Q86Y13 1208 aaKnown RBP20.11■□□□□ 0.81
SPG7-218ENST00000568205 COL23A1Q86Y22 540 aaPredicted RBP20.11■□□□□ 0.81
SPG7-218ENST00000568205 UBR3Q6ZT12 1888 aa20.1■□□□□ 0.81
SPG7-218ENST00000568205 RFC4P35249 363 aa20.1■□□□□ 0.81
SPG7-218ENST00000568205 AIMP1Q12904 312 aaKnown RBP20.1■□□□□ 0.81
SPG7-218ENST00000568205 R3HDM1Q15032 1099 aaKnown RBP20.1■□□□□ 0.81
SPG7-218ENST00000568205 ARXQ96QS3 562 aa20.1■□□□□ 0.81
SPG7-218ENST00000568205 RCAN3Q9UKA8 241 aa20.1■□□□□ 0.81
SPG7-218ENST00000568205 TBC1D2BQ9UPU7 963 aa20.1■□□□□ 0.81
SPG7-218ENST00000568205 BRPF1P55201 1214 aaPredicted RBP20.09■□□□□ 0.81
SPG7-218ENST00000568205 FLIIQ13045 1269 aa20.09■□□□□ 0.81
SPG7-218ENST00000568205 KIF6Q6ZMV9 814 aa20.09■□□□□ 0.81
SPG7-218ENST00000568205 NARFQ9UHQ1 456 aa20.09■□□□□ 0.81
SPG7-218ENST00000568205 USP42Q9H9J4 1324 aaKnown RBP20.08■□□□□ 0.81
SPG7-218ENST00000568205 MSH5O43196 834 aa20.08■□□□□ 0.81
SPG7-218ENST00000568205 BCAR3O75815 825 aa20.08■□□□□ 0.81
SPG7-218ENST00000568205 ZPR1O75312 459 aa20.07■□□□□ 0.8
SPG7-218ENST00000568205 CAMTA2O94983 1202 aa20.07■□□□□ 0.8
SPG7-218ENST00000568205 SRP68Q9UHB9 627 aaKnown RBP20.07■□□□□ 0.8
SPG7-218ENST00000568205 MAP3K15Q6ZN16 1313 aa20.06■□□□□ 0.8
SPG7-218ENST00000568205 KIF16BQ96L93 1317 aa20.06■□□□□ 0.8
SPG7-218ENST00000568205 PSDA5PKW4 1024 aaPredicted RBP20.06■□□□□ 0.8
SPG7-218ENST00000568205 DDX58O95786 925 aaKnown RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms