RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 SSFA2P28290 1259 aa17.08■□□□□ 0.32
CNOT1-213ENST00000568158 MSL1Q68DK7 614 aa17.08■□□□□ 0.32
CNOT1-213ENST00000568158 ARHGEF1Q92888 912 aaKnown RBP17.08■□□□□ 0.32
CNOT1-213ENST00000568158 UBR2Q8IWV8 1755 aa17.07■□□□□ 0.32
CNOT1-213ENST00000568158 COL5A3P25940 1745 aaPredicted RBP17.07■□□□□ 0.32
CNOT1-213ENST00000568158 DIEXFQ68CQ4 756 aaKnown RBP17.07■□□□□ 0.32
CNOT1-213ENST00000568158 TEX13AQ9BXU3 409 aaPredicted RBP17.07■□□□□ 0.32
CNOT1-213ENST00000568158 CCDC87Q9NVE4 849 aa17.07■□□□□ 0.32
CNOT1-213ENST00000568158 LAS1LQ9Y4W2 734 aaKnown RBP17.07■□□□□ 0.32
CNOT1-213ENST00000568158 STARD3NLO95772 234 aa17.06■□□□□ 0.32
CNOT1-213ENST00000568158 A1BGP04217 495 aa17.06■□□□□ 0.32
CNOT1-213ENST00000568158 CANXP27824 592 aaKnown RBP17.06■□□□□ 0.32
CNOT1-213ENST00000568158 SGIP1Q9BQI5 828 aa17.06■□□□□ 0.32
CNOT1-213ENST00000568158 SNRPA1P09661 255 aaKnown RBP17.05■□□□□ 0.32
CNOT1-213ENST00000568158 EIF4A1P60842 406 aaKnown RBP17.05■□□□□ 0.32
CNOT1-213ENST00000568158 PPP1R1BQ9UD71 204 aaPredicted RBP17.05■□□□□ 0.32
CNOT1-213ENST00000568158 TSPYL4Q9UJ04 414 aa17.05■□□□□ 0.32
CNOT1-213ENST00000568158 ZBTB1Q9Y2K1 713 aa17.05■□□□□ 0.32
CNOT1-213ENST00000568158 SALL2Q9Y467 1007 aaPredicted RBP17.04■□□□□ 0.32
CNOT1-213ENST00000568158 LRP5O75197 1615 aa17.03■□□□□ 0.32
CNOT1-213ENST00000568158 CHL1O00533 1208 aa17.03■□□□□ 0.32
CNOT1-213ENST00000568158 RFC4P35249 363 aa17.03■□□□□ 0.32
CNOT1-213ENST00000568158 PIP4K2AP48426 406 aaPredicted RBP17.03■□□□□ 0.32
CNOT1-213ENST00000568158 GIGYF1O75420 1035 aaPredicted RBP17.02■□□□□ 0.32
CNOT1-213ENST00000568158 MIER1Q8N108 512 aa17.02■□□□□ 0.32
CNOT1-213ENST00000568158 SRP68Q9UHB9 627 aaKnown RBP17.02■□□□□ 0.32
CNOT1-213ENST00000568158 SOS1Q07889 1333 aaPredicted RBP17.01■□□□□ 0.31
CNOT1-213ENST00000568158 CICQ96RK0 1608 aaPredicted RBP17.01■□□□□ 0.31
CNOT1-213ENST00000568158 POLD1P28340 1107 aa17.01■□□□□ 0.31
CNOT1-213ENST00000568158 ARXQ96QS3 562 aa17.01■□□□□ 0.31
CNOT1-213ENST00000568158 BABAM1Q9NWV8 329 aa17.01■□□□□ 0.31
CNOT1-213ENST00000568158 SRCAPQ6ZRS2 3230 aa17■□□□□ 0.31
CNOT1-213ENST00000568158 KDM3BQ7LBC6 1761 aa17■□□□□ 0.31
CNOT1-213ENST00000568158 GYS1P13807 737 aa17■□□□□ 0.31
CNOT1-213ENST00000568158 EIF5P55010 431 aaKnown RBP17■□□□□ 0.31
CNOT1-213ENST00000568158 CCER2I3L3R5 266 aa16.99■□□□□ 0.31
CNOT1-213ENST00000568158 KRT24Q2M2I5 525 aa16.99■□□□□ 0.31
CNOT1-213ENST00000568158 CFAP44Q96MT7 982 aa16.99■□□□□ 0.31
CNOT1-213ENST00000568158 ZNF330Q9Y3S2 320 aaPredicted RBP16.99■□□□□ 0.31
CNOT1-213ENST00000568158 NBPF26B4DH59 902 aa16.98■□□□□ 0.31
CNOT1-213ENST00000568158 ZNF853P0CG23 659 aa16.98■□□□□ 0.31
CNOT1-213ENST00000568158 USPL1Q5W0Q7 1092 aa16.98■□□□□ 0.31
CNOT1-213ENST00000568158 NBPF10Q6P3W6 841 aaKnown RBP16.98■□□□□ 0.31
CNOT1-213ENST00000568158 WWC1Q8IX03 1113 aa16.98■□□□□ 0.31
CNOT1-213ENST00000568158 NBPF15Q8N660 670 aa16.98■□□□□ 0.31
CNOT1-213ENST00000568158 TBC1D2BQ9UPU7 963 aa16.98■□□□□ 0.31
CNOT1-213ENST00000568158 COL24A1Q17RW2 1714 aa16.97■□□□□ 0.31
CNOT1-213ENST00000568158 ZPR1O75312 459 aa16.97■□□□□ 0.31
CNOT1-213ENST00000568158 EIF2S2P20042 333 aaKnown RBP16.97■□□□□ 0.31
CNOT1-213ENST00000568158 IL6STP40189 918 aaPredicted RBP16.97■□□□□ 0.31
CNOT1-213ENST00000568158 CCDC27Q2M243 656 aa16.97■□□□□ 0.31
CNOT1-213ENST00000568158 PPP4R3CPQ6ZMV5 832 aa16.97■□□□□ 0.31
CNOT1-213ENST00000568158 NLGN1Q8N2Q7 840 aa16.97■□□□□ 0.31
CNOT1-213ENST00000568158 FHDC1Q9C0D6 1143 aaPredicted RBP16.97■□□□□ 0.31
CNOT1-213ENST00000568158 MBIPQ9NS73 344 aa16.97■□□□□ 0.31
CNOT1-213ENST00000568158 NARFQ9UHQ1 456 aa16.97■□□□□ 0.31
CNOT1-213ENST00000568158 USP42Q9H9J4 1324 aaKnown RBP16.96■□□□□ 0.31
CNOT1-213ENST00000568158 FKBP8Q14318 412 aa16.96■□□□□ 0.31
CNOT1-213ENST00000568158 KLHL34Q8N239 644 aa16.96■□□□□ 0.31
CNOT1-213ENST00000568158 COL15A1P39059 1388 aa16.96■□□□□ 0.31
CNOT1-213ENST00000568158 A0A087WZG4 1122 aa16.95■□□□□ 0.3
CNOT1-213ENST00000568158 MMP10P09238 476 aa16.95■□□□□ 0.3
CNOT1-213ENST00000568158 GNAI1P63096 354 aa16.95■□□□□ 0.3
CNOT1-213ENST00000568158 CALD1Q05682 793 aaKnown RBP16.95■□□□□ 0.3
CNOT1-213ENST00000568158 NGEFQ8N5V2 710 aa16.95■□□□□ 0.3
CNOT1-213ENST00000568158 NECTIN2Q92692 538 aa16.95■□□□□ 0.3
CNOT1-213ENST00000568158 SYT17Q9BSW7 474 aa16.95■□□□□ 0.3
CNOT1-213ENST00000568158 BCL2L12Q9HB09 334 aa16.95■□□□□ 0.3
CNOT1-213ENST00000568158 IFT57Q9NWB7 429 aa16.95■□□□□ 0.3
CNOT1-213ENST00000568158 NCBP3Q53F19 620 aaKnown RBP16.94■□□□□ 0.3
CNOT1-213ENST00000568158 NPM2Q86SE8 214 aaKnown RBP16.94■□□□□ 0.3
CNOT1-213ENST00000568158 C4AP0C0L4 1744 aa16.93■□□□□ 0.3
CNOT1-213ENST00000568158 MYL6BP14649 208 aa16.93■□□□□ 0.3
CNOT1-213ENST00000568158 TM4SF1P30408 202 aa16.93■□□□□ 0.3
CNOT1-213ENST00000568158 RNF216Q9NWF9 866 aaPredicted RBP16.93■□□□□ 0.3
CNOT1-213ENST00000568158 ELL2O00472 640 aaPredicted RBP16.92■□□□□ 0.3
CNOT1-213ENST00000568158 DZIP3Q86Y13 1208 aaKnown RBP16.92■□□□□ 0.3
CNOT1-213ENST00000568158 ANXA1P04083 346 aa16.91■□□□□ 0.3
CNOT1-213ENST00000568158 PDIA6Q15084 440 aa16.91■□□□□ 0.3
CNOT1-213ENST00000568158 DUSP27Q5VZP5 1158 aa16.91■□□□□ 0.3
CNOT1-213ENST00000568158 C8orf58Q8NAV2 365 aa16.91■□□□□ 0.3
CNOT1-213ENST00000568158 TSR2Q969E8 191 aaKnown RBP16.91■□□□□ 0.3
CNOT1-213ENST00000568158 CAMTA2O94983 1202 aa16.9■□□□□ 0.3
CNOT1-213ENST00000568158 DDR1Q08345 913 aa16.9■□□□□ 0.3
CNOT1-213ENST00000568158 NFIXQ14938 502 aa16.9■□□□□ 0.3
CNOT1-213ENST00000568158 BICDL1Q6ZP65 573 aa16.9■□□□□ 0.3
CNOT1-213ENST00000568158 WDR63Q8IWG1 891 aa16.9■□□□□ 0.3
CNOT1-213ENST00000568158 PARP3Q9Y6F1 533 aa16.9■□□□□ 0.3
CNOT1-213ENST00000568158 PROSER3Q2NL68 480 aa16.89■□□□□ 0.29
CNOT1-213ENST00000568158 TBC1D9BQ66K14 1250 aa16.89■□□□□ 0.29
CNOT1-213ENST00000568158 TTLL7Q6ZT98 887 aa16.89■□□□□ 0.29
CNOT1-213ENST00000568158 NLGN2Q8NFZ4 835 aa16.89■□□□□ 0.29
CNOT1-213ENST00000568158 SPINK5Q9NQ38 1064 aaPredicted RBP16.89■□□□□ 0.29
CNOT1-213ENST00000568158 POLRMTO00411 1230 aaKnown RBP16.88■□□□□ 0.29
CNOT1-213ENST00000568158 TSPYL6Q8N831 410 aa16.88■□□□□ 0.29
CNOT1-213ENST00000568158 IL16Q14005 1332 aa16.88■□□□□ 0.29
CNOT1-213ENST00000568158 LAMB4A4D0S4 1761 aa16.87■□□□□ 0.29
CNOT1-213ENST00000568158 HLFQ16534 295 aa16.87■□□□□ 0.29
CNOT1-213ENST00000568158 LRP10Q7Z4F1 713 aa16.87■□□□□ 0.29
CNOT1-213ENST00000568158 SERPINB2P05120 415 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms