RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 SWI5Q1ZZU3 235 aa7.58□□□□□ -1.2
HERPUD1-212ENST00000567944 RBM19Q9Y4C8 960 aaKnown RBP7.58□□□□□ -1.2
HERPUD1-212ENST00000567944 WDR44Q5JSH3 913 aa7.57□□□□□ -1.2
HERPUD1-212ENST00000567944 SH3PXD2AQ5TCZ1 1133 aa7.57□□□□□ -1.2
HERPUD1-212ENST00000567944 TMEM214Q6NUQ4 689 aaKnown RBP7.57□□□□□ -1.2
HERPUD1-212ENST00000567944 RHBDD1Q8TEB9 315 aa7.57□□□□□ -1.2
HERPUD1-212ENST00000567944 CLP1Q92989 425 aaKnown RBP7.57□□□□□ -1.2
HERPUD1-212ENST00000567944 HINFPQ9BQA5 517 aa7.57□□□□□ -1.2
HERPUD1-212ENST00000567944 ATAD2Q6PL18 1390 aa7.57□□□□□ -1.2
HERPUD1-212ENST00000567944 SLC35F4A4IF30 521 aa7.56□□□□□ -1.2
HERPUD1-212ENST00000567944 PHKA2P46019 1235 aa7.56□□□□□ -1.2
HERPUD1-212ENST00000567944 PTSQ03393 145 aa7.56□□□□□ -1.2
HERPUD1-212ENST00000567944 TAS1R3Q7RTX0 852 aa7.56□□□□□ -1.2
HERPUD1-212ENST00000567944 SCG3Q8WXD2 468 aaKnown RBP7.56□□□□□ -1.2
HERPUD1-212ENST00000567944 IRF7Q92985 503 aa7.56□□□□□ -1.2
HERPUD1-212ENST00000567944 PRIMPOLQ96LW4 560 aa7.56□□□□□ -1.2
HERPUD1-212ENST00000567944 EML1O00423 815 aa7.55□□□□□ -1.2
HERPUD1-212ENST00000567944 CSB-PGBD3P0DP91 1061 aa7.55□□□□□ -1.2
HERPUD1-212ENST00000567944 IGFBP4P22692 258 aa7.55□□□□□ -1.2
HERPUD1-212ENST00000567944 TEAD4Q15561 434 aa7.55□□□□□ -1.2
HERPUD1-212ENST00000567944 PHLDB3Q6NSJ2 640 aa7.55□□□□□ -1.2
HERPUD1-212ENST00000567944 C7orf43Q8WVR3 580 aa7.55□□□□□ -1.2
HERPUD1-212ENST00000567944 NIFKQ9BYG3 293 aaKnown RBP7.55□□□□□ -1.2
HERPUD1-212ENST00000567944 PARP3Q9Y6F1 533 aa7.55□□□□□ -1.2
HERPUD1-212ENST00000567944 ERBB4Q15303 1308 aa7.54□□□□□ -1.2
HERPUD1-212ENST00000567944 PRMT3O60678 531 aa7.54□□□□□ -1.2
HERPUD1-212ENST00000567944 NOS2P35228 1153 aa7.54□□□□□ -1.2
HERPUD1-212ENST00000567944 GNASQ5JWF2 1037 aa7.54□□□□□ -1.2
HERPUD1-212ENST00000567944 C2orf49Q9BVC5 232 aaPredicted RBP7.54□□□□□ -1.2
HERPUD1-212ENST00000567944 USTQ9Y2C2 406 aa7.54□□□□□ -1.2
HERPUD1-212ENST00000567944 PLA2G4AP47712 749 aa7.53□□□□□ -1.2
HERPUD1-212ENST00000567944 HIRAP54198 1017 aaPredicted RBP7.53□□□□□ -1.2
HERPUD1-212ENST00000567944 FKBP5Q13451 457 aaPredicted RBP7.53□□□□□ -1.2
HERPUD1-212ENST00000567944 STAG2Q8N3U4 1231 aa7.53□□□□□ -1.2
HERPUD1-212ENST00000567944 CCDC155Q8N6L0 562 aa7.53□□□□□ -1.2
HERPUD1-212ENST00000567944 L3MBTL2Q969R5 705 aa7.53□□□□□ -1.2
HERPUD1-212ENST00000567944 KLRG1Q96E93 195 aa7.53□□□□□ -1.2
HERPUD1-212ENST00000567944 CUEDC1Q9NWM3 386 aaPredicted RBP7.53□□□□□ -1.2
HERPUD1-212ENST00000567944 CABP1Q9NZU7 370 aa7.53□□□□□ -1.2
HERPUD1-212ENST00000567944 CXXC1Q9P0U4 656 aaPredicted RBP7.53□□□□□ -1.2
HERPUD1-212ENST00000567944 PPP1R12BO60237 982 aaPredicted RBP7.52□□□□□ -1.21
HERPUD1-212ENST00000567944 THBS1P07996 1170 aa7.52□□□□□ -1.21
HERPUD1-212ENST00000567944 ATP4AP20648 1035 aa7.52□□□□□ -1.21
HERPUD1-212ENST00000567944 SSFA2P28290 1259 aa7.52□□□□□ -1.21
HERPUD1-212ENST00000567944 SCNN1AP37088 669 aa7.52□□□□□ -1.21
HERPUD1-212ENST00000567944 TXLNAP40222 546 aa7.52□□□□□ -1.21
HERPUD1-212ENST00000567944 PSMA6P60900 246 aaKnown RBP7.52□□□□□ -1.21
HERPUD1-212ENST00000567944 CAPN12Q6ZSI9 719 aa7.52□□□□□ -1.21
HERPUD1-212ENST00000567944 TIMMDC1Q9NPL8 285 aa7.52□□□□□ -1.21
HERPUD1-212ENST00000567944 DYRK1BQ9Y463 629 aa7.52□□□□□ -1.21
HERPUD1-212ENST00000567944 SERTM1A2A2V5 107 aa7.51□□□□□ -1.21
HERPUD1-212ENST00000567944 H3BM21 787 aa7.51□□□□□ -1.21
HERPUD1-212ENST00000567944 MSX1P28360 303 aa7.51□□□□□ -1.21
HERPUD1-212ENST00000567944 PPFIA3O75145 1194 aa7.5□□□□□ -1.21
HERPUD1-212ENST00000567944 ATP2B4P23634 1241 aa7.5□□□□□ -1.21
HERPUD1-212ENST00000567944 NPAS3Q8IXF0 933 aa7.5□□□□□ -1.21
HERPUD1-212ENST00000567944 CHMP7Q8WUX9 453 aaPredicted RBP7.5□□□□□ -1.21
HERPUD1-212ENST00000567944 A0A1B0GTH6 734 aa7.49□□□□□ -1.21
HERPUD1-212ENST00000567944 FOXO3O43524 673 aa7.49□□□□□ -1.21
HERPUD1-212ENST00000567944 GTF2E1P29083 439 aaPredicted RBP7.49□□□□□ -1.21
HERPUD1-212ENST00000567944 ZDHHC3Q9NYG2 299 aa7.49□□□□□ -1.21
HERPUD1-212ENST00000567944 HCN4Q9Y3Q4 1203 aa7.49□□□□□ -1.21
HERPUD1-212ENST00000567944 F11P03951 625 aa7.48□□□□□ -1.21
HERPUD1-212ENST00000567944 UBAP2LQ14157 1087 aaKnown RBP7.48□□□□□ -1.21
HERPUD1-212ENST00000567944 DBN1Q16643 649 aa7.48□□□□□ -1.21
HERPUD1-212ENST00000567944 KCTD17Q8N5Z5 321 aa7.48□□□□□ -1.21
HERPUD1-212ENST00000567944 C1orf216Q8TAB5 229 aa7.48□□□□□ -1.21
HERPUD1-212ENST00000567944 ZNF232Q9UNY5 417 aa7.48□□□□□ -1.21
HERPUD1-212ENST00000567944 ITGA6P23229 1130 aa7.47□□□□□ -1.21
HERPUD1-212ENST00000567944 AIDAQ96BJ3 306 aa7.47□□□□□ -1.21
HERPUD1-212ENST00000567944 GAS2L1Q99501 681 aaPredicted RBP7.47□□□□□ -1.21
HERPUD1-212ENST00000567944 PHACTR1Q9C0D0 580 aa7.47□□□□□ -1.21
HERPUD1-212ENST00000567944 QTRT2Q9H974 415 aaKnown RBP7.47□□□□□ -1.21
HERPUD1-212ENST00000567944 GPAMQ9HCL2 828 aa7.47□□□□□ -1.21
HERPUD1-212ENST00000567944 C1orf53Q5VUE5 145 aa7.46□□□□□ -1.22
HERPUD1-212ENST00000567944 ALDH16A1Q8IZ83 802 aa7.46□□□□□ -1.22
HERPUD1-212ENST00000567944 ZIC5Q96T25 663 aa7.46□□□□□ -1.22
HERPUD1-212ENST00000567944 TRAIPQ9BWF2 469 aa7.46□□□□□ -1.22
HERPUD1-212ENST00000567944 SAP130Q9H0E3 1048 aa7.46□□□□□ -1.22
HERPUD1-212ENST00000567944 CRISPLD1Q9H336 500 aa7.46□□□□□ -1.22
HERPUD1-212ENST00000567944 RUBCNLQ9H714 662 aa7.46□□□□□ -1.22
HERPUD1-212ENST00000567944 NBPF1Q3BBV0 1214 aa7.45□□□□□ -1.22
HERPUD1-212ENST00000567944 COL26A1Q96A83 441 aa7.45□□□□□ -1.22
HERPUD1-212ENST00000567944 MKNK1Q9BUB5 465 aa7.45□□□□□ -1.22
HERPUD1-212ENST00000567944 SEPT3Q9UH03 358 aa7.45□□□□□ -1.22
HERPUD1-212ENST00000567944 HCN2Q9UL51 889 aa7.45□□□□□ -1.22
HERPUD1-212ENST00000567944 LRFN2Q9ULH4 789 aa7.45□□□□□ -1.22
HERPUD1-212ENST00000567944 COX20Q5RI15 118 aa7.44□□□□□ -1.22
HERPUD1-212ENST00000567944 TRIM22Q8IYM9 498 aa7.44□□□□□ -1.22
HERPUD1-212ENST00000567944 NANOS1Q8WY41 292 aaKnown RBP7.44□□□□□ -1.22
HERPUD1-212ENST00000567944 ZNF837Q96EG3 531 aaPredicted RBP7.44□□□□□ -1.22
HERPUD1-212ENST00000567944 MYO19Q96H55 970 aa7.44□□□□□ -1.22
HERPUD1-212ENST00000567944 NGLY1Q96IV0 654 aa7.44□□□□□ -1.22
HERPUD1-212ENST00000567944 BCS1LQ9Y276 419 aa7.44□□□□□ -1.22
HERPUD1-212ENST00000567944 A0A1W2PNR3 127 aa7.43□□□□□ -1.22
HERPUD1-212ENST00000567944 NAA30Q147X3 362 aaPredicted RBP7.43□□□□□ -1.22
HERPUD1-212ENST00000567944 FAM26DQ5JW98 314 aa7.43□□□□□ -1.22
HERPUD1-212ENST00000567944 RIPOR1Q6ZS17 1223 aa7.43□□□□□ -1.22
HERPUD1-212ENST00000567944 VWA5B2Q8N398 1253 aa7.43□□□□□ -1.22
HERPUD1-212ENST00000567944 GPR161Q8N6U8 529 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms