RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 CCDC146Q8IYE0 955 aa25.49■■□□□ 1.67
CCDC113-204ENST00000566498 PELP1Q8IZL8 1130 aaKnown RBP25.49■■□□□ 1.67
CCDC113-204ENST00000566498 ZBTB1Q9Y2K1 713 aa25.49■■□□□ 1.67
CCDC113-204ENST00000566498 CD2APQ9Y5K6 639 aa25.49■■□□□ 1.67
CCDC113-204ENST00000566498 ADAMTS8Q9UP79 889 aa25.48■■□□□ 1.67
CCDC113-204ENST00000566498 UBR2Q8IWV8 1755 aa25.48■■□□□ 1.67
CCDC113-204ENST00000566498 DLG5Q8TDM6 1919 aa25.47■■□□□ 1.67
CCDC113-204ENST00000566498 SOS1Q07889 1333 aaPredicted RBP25.47■■□□□ 1.67
CCDC113-204ENST00000566498 THUMPD2Q9BTF0 503 aaKnown RBP25.47■■□□□ 1.67
CCDC113-204ENST00000566498 CICQ96RK0 1608 aaPredicted RBP25.47■■□□□ 1.67
CCDC113-204ENST00000566498 PARP3Q9Y6F1 533 aa25.46■■□□□ 1.67
CCDC113-204ENST00000566498 USP42Q9H9J4 1324 aaKnown RBP25.45■■□□□ 1.66
CCDC113-204ENST00000566498 TMPOP42166 694 aaKnown RBP25.45■■□□□ 1.66
CCDC113-204ENST00000566498 NEUROD2Q15784 382 aa25.45■■□□□ 1.66
CCDC113-204ENST00000566498 NPM2Q86SE8 214 aaKnown RBP25.45■■□□□ 1.66
CCDC113-204ENST00000566498 PNISRQ8TF01 805 aaKnown RBP25.45■■□□□ 1.66
CCDC113-204ENST00000566498 ZNF330Q9Y3S2 320 aaPredicted RBP25.45■■□□□ 1.66
CCDC113-204ENST00000566498 A1BGP04217 495 aa25.44■■□□□ 1.66
CCDC113-204ENST00000566498 SNRPA1P09661 255 aaKnown RBP25.44■■□□□ 1.66
CCDC113-204ENST00000566498 FKBP8Q14318 412 aa25.44■■□□□ 1.66
CCDC113-204ENST00000566498 USPL1Q5W0Q7 1092 aa25.44■■□□□ 1.66
CCDC113-204ENST00000566498 RUNDC1Q96C34 613 aa25.44■■□□□ 1.66
CCDC113-204ENST00000566498 RRP7AQ9Y3A4 280 aaKnown RBP25.43■■□□□ 1.66
CCDC113-204ENST00000566498 USP16Q9Y5T5 823 aa25.43■■□□□ 1.66
CCDC113-204ENST00000566498 NARFQ9UHQ1 456 aa25.42■■□□□ 1.66
CCDC113-204ENST00000566498 COL15A1P39059 1388 aa25.42■■□□□ 1.66
CCDC113-204ENST00000566498 C4AP0C0L4 1744 aa25.41■■□□□ 1.66
CCDC113-204ENST00000566498 A0A087WZG4 1122 aa25.41■■□□□ 1.66
CCDC113-204ENST00000566498 EIF5P55010 431 aaKnown RBP25.41■■□□□ 1.66
CCDC113-204ENST00000566498 LMOD3Q0VAK6 560 aa25.41■■□□□ 1.66
CCDC113-204ENST00000566498 PRAMEF22A3QJZ6 481 aa25.4■■□□□ 1.66
CCDC113-204ENST00000566498 ANP32CO43423 234 aa25.4■■□□□ 1.66
CCDC113-204ENST00000566498 YY1P25490 414 aa25.39■■□□□ 1.66
CCDC113-204ENST00000566498 IL6STP40189 918 aaPredicted RBP25.38■■□□□ 1.65
CCDC113-204ENST00000566498 TBC1D2BQ9UPU7 963 aa25.37■■□□□ 1.65
CCDC113-204ENST00000566498 TM4SF1P30408 202 aa25.36■■□□□ 1.65
CCDC113-204ENST00000566498 PIP4K2AP48426 406 aaPredicted RBP25.36■■□□□ 1.65
CCDC113-204ENST00000566498 TSPYL4Q9UJ04 414 aa25.36■■□□□ 1.65
CCDC113-204ENST00000566498 WWC3Q9ULE0 1092 aa25.35■■□□□ 1.65
CCDC113-204ENST00000566498 EIF4A1P60842 406 aaKnown RBP25.34■■□□□ 1.65
CCDC113-204ENST00000566498 GRIN3BO60391 1043 aa25.33■■□□□ 1.65
CCDC113-204ENST00000566498 YBX3P16989 372 aaKnown RBP eCLIP25.33■■□□□ 1.65
CCDC113-204ENST00000566498 DDR1Q08345 913 aa25.33■■□□□ 1.65
CCDC113-204ENST00000566498 CCDC184Q52MB2 194 aa25.33■■□□□ 1.65
CCDC113-204ENST00000566498 BICDL1Q6ZP65 573 aa25.33■■□□□ 1.65
CCDC113-204ENST00000566498 BCL2L12Q9HB09 334 aa25.33■■□□□ 1.65
CCDC113-204ENST00000566498 GIGYF1O75420 1035 aaPredicted RBP25.32■■□□□ 1.64
CCDC113-204ENST00000566498 TGFB2P61812 414 aa25.32■■□□□ 1.64
CCDC113-204ENST00000566498 NFIXQ14938 502 aa25.32■■□□□ 1.64
CCDC113-204ENST00000566498 LAS1LQ9Y4W2 734 aaKnown RBP25.32■■□□□ 1.64
CCDC113-204ENST00000566498 A0A0G2JLW4 131 aa25.31■■□□□ 1.64
CCDC113-204ENST00000566498 POLRMTO00411 1230 aaKnown RBP25.31■■□□□ 1.64
CCDC113-204ENST00000566498 TRIM35Q9UPQ4 493 aa25.31■■□□□ 1.64
CCDC113-204ENST00000566498 APAF1O14727 1248 aa25.3■■□□□ 1.64
CCDC113-204ENST00000566498 DZIP3Q86Y13 1208 aaKnown RBP25.3■■□□□ 1.64
CCDC113-204ENST00000566498 BABAM1Q9NWV8 329 aa25.29■■□□□ 1.64
CCDC113-204ENST00000566498 MRS2Q9HD23 443 aa25.28■■□□□ 1.64
CCDC113-204ENST00000566498 UTRNP46939 3433 aa25.27■■□□□ 1.64
CCDC113-204ENST00000566498 GOLGB1Q14789 3259 aaKnown RBP25.27■■□□□ 1.64
CCDC113-204ENST00000566498 KDM3BQ7LBC6 1761 aa25.27■■□□□ 1.64
CCDC113-204ENST00000566498 NBPF26B4DH59 902 aa25.27■■□□□ 1.64
CCDC113-204ENST00000566498 SERPINB2P05120 415 aa25.27■■□□□ 1.64
CCDC113-204ENST00000566498 DPEP1P16444 411 aa25.27■■□□□ 1.64
CCDC113-204ENST00000566498 TBC1D9BQ66K14 1250 aa25.27■■□□□ 1.64
CCDC113-204ENST00000566498 NBPF10Q6P3W6 841 aaKnown RBP25.27■■□□□ 1.64
CCDC113-204ENST00000566498 NGEFQ8N5V2 710 aa25.27■■□□□ 1.64
CCDC113-204ENST00000566498 NBPF15Q8N660 670 aa25.27■■□□□ 1.64
CCDC113-204ENST00000566498 CAMTA2O94983 1202 aa25.25■■□□□ 1.63
CCDC113-204ENST00000566498 SETDB2Q96T68 719 aa25.25■■□□□ 1.63
CCDC113-204ENST00000566498 C10orf71Q711Q0 1435 aa25.25■■□□□ 1.63
CCDC113-204ENST00000566498 EIF2S2P20042 333 aaKnown RBP25.24■■□□□ 1.63
CCDC113-204ENST00000566498 CHL1O00533 1208 aa25.23■■□□□ 1.63
CCDC113-204ENST00000566498 BCS1LQ9Y276 419 aa25.23■■□□□ 1.63
CCDC113-204ENST00000566498 CHD4Q14839 1912 aa25.23■■□□□ 1.63
CCDC113-204ENST00000566498 KIF13BQ9NQT8 1826 aa25.23■■□□□ 1.63
CCDC113-204ENST00000566498 N4BP2Q86UW6 1770 aaPredicted RBP25.23■■□□□ 1.63
CCDC113-204ENST00000566498 NPHP1O15259 732 aa25.22■■□□□ 1.63
CCDC113-204ENST00000566498 MYL6BP14649 208 aa25.22■■□□□ 1.63
CCDC113-204ENST00000566498 ZNF652Q9Y2D9 606 aa25.22■■□□□ 1.63
CCDC113-204ENST00000566498 PXDNLA1KZ92 1463 aa25.21■■□□□ 1.63
CCDC113-204ENST00000566498 CHRNA5P30532 468 aa25.2■■□□□ 1.62
CCDC113-204ENST00000566498 CLEC4GQ6UXB4 293 aa25.2■■□□□ 1.62
CCDC113-204ENST00000566498 PIM2Q9P1W9 311 aa25.2■■□□□ 1.62
CCDC113-204ENST00000566498 KCNA3P22001 575 aa25.19■■□□□ 1.62
CCDC113-204ENST00000566498 AFDNP55196 1824 aaKnown RBP25.19■■□□□ 1.62
CCDC113-204ENST00000566498 SENP3-EIF4A1A0A087X0R7 540 aa25.18■■□□□ 1.62
CCDC113-204ENST00000566498 CALD1Q05682 793 aaKnown RBP25.18■■□□□ 1.62
CCDC113-204ENST00000566498 NECTIN2Q92692 538 aa25.18■■□□□ 1.62
CCDC113-204ENST00000566498 CFAP44Q96MT7 982 aa25.18■■□□□ 1.62
CCDC113-204ENST00000566498 LAMB4A4D0S4 1761 aa25.17■■□□□ 1.62
CCDC113-204ENST00000566498 CARMIL3Q8ND23 1372 aa25.17■■□□□ 1.62
CCDC113-204ENST00000566498 KIF6Q6ZMV9 814 aa25.16■■□□□ 1.62
CCDC113-204ENST00000566498 CCDC24Q8N4L8 307 aa25.16■■□□□ 1.62
CCDC113-204ENST00000566498 HLFQ16534 295 aa25.15■■□□□ 1.62
CCDC113-204ENST00000566498 KRT24Q2M2I5 525 aa25.15■■□□□ 1.62
CCDC113-204ENST00000566498 DALRD3Q5D0E6 543 aaKnown RBP25.15■■□□□ 1.62
CCDC113-204ENST00000566498 NIP7Q9Y221 180 aaKnown RBP eCLIP25.15■■□□□ 1.62
CCDC113-204ENST00000566498 SCN7AQ01118 1682 aa25.15■■□□□ 1.62
CCDC113-204ENST00000566498 ERBB4Q15303 1308 aa25.14■■□□□ 1.62
CCDC113-204ENST00000566498 H0YIN7 160 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms