RNA–Protein interactions for RNA: ENST00000566466.1

SMPD3-207, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-207ENST00000566466 ANO8Q9HCE9 1232 aaPredicted RBP12.02□□□□□ -0.49
SMPD3-207ENST00000566466 LAS1LQ9Y4W2 734 aaKnown RBP12.02□□□□□ -0.49
SMPD3-207ENST00000566466 USP16Q9Y5T5 823 aa12.02□□□□□ -0.49
SMPD3-207ENST00000566466 C4BP0C0L5 1744 aa12.02□□□□□ -0.49
SMPD3-207ENST00000566466 CYP19A1P11511 503 aaPredicted RBP12.01□□□□□ -0.49
SMPD3-207ENST00000566466 PDIA6Q15084 440 aa12.01□□□□□ -0.49
SMPD3-207ENST00000566466 ZNF827Q17R98 1081 aa12.01□□□□□ -0.49
SMPD3-207ENST00000566466 FMNL2Q96PY5 1086 aa12.01□□□□□ -0.49
SMPD3-207ENST00000566466 TUBGCP6Q96RT7 1819 aa12□□□□□ -0.49
SMPD3-207ENST00000566466 NBPF26B4DH59 902 aa12□□□□□ -0.49
SMPD3-207ENST00000566466 VAMP4O75379 141 aa12□□□□□ -0.49
SMPD3-207ENST00000566466 NBPF14Q5TI25 921 aa12□□□□□ -0.49
SMPD3-207ENST00000566466 NBPF10Q6P3W6 841 aaKnown RBP12□□□□□ -0.49
SMPD3-207ENST00000566466 INTS5Q6P9B9 1019 aaKnown RBP12□□□□□ -0.49
SMPD3-207ENST00000566466 CCDC125Q86Z20 511 aa12□□□□□ -0.49
SMPD3-207ENST00000566466 TTC5Q8N0Z6 440 aa12□□□□□ -0.49
SMPD3-207ENST00000566466 NBPF15Q8N660 670 aa12□□□□□ -0.49
SMPD3-207ENST00000566466 MYH16Q9H6N6 1097 aa12□□□□□ -0.49
SMPD3-207ENST00000566466 ATP6V1AP38606 617 aa11.99□□□□□ -0.49
SMPD3-207ENST00000566466 PROSER3Q2NL68 480 aa11.99□□□□□ -0.49
SMPD3-207ENST00000566466 SLC27A3Q5K4L6 730 aa11.99□□□□□ -0.49
SMPD3-207ENST00000566466 SMIM5Q71RC9 77 aa11.99□□□□□ -0.49
SMPD3-207ENST00000566466 AKT1S1Q96B36 256 aa11.99□□□□□ -0.49
SMPD3-207ENST00000566466 RBM42Q9BTD8 480 aaKnown RBP11.99□□□□□ -0.49
SMPD3-207ENST00000566466 CCNL1Q9UK58 526 aaPredicted RBP11.99□□□□□ -0.49
SMPD3-207ENST00000566466 KAT6BQ8WYB5 2073 aa11.99□□□□□ -0.49
SMPD3-207ENST00000566466 CNTNAP4Q9C0A0 1308 aa11.98□□□□□ -0.49
SMPD3-207ENST00000566466 HOXB7P09629 217 aa11.98□□□□□ -0.49
SMPD3-207ENST00000566466 SNRPA1P09661 255 aaKnown RBP11.98□□□□□ -0.49
SMPD3-207ENST00000566466 ZBTB1Q9Y2K1 713 aa11.98□□□□□ -0.49
SMPD3-207ENST00000566466 UBR3Q6ZT12 1888 aa11.97□□□□□ -0.49
SMPD3-207ENST00000566466 ELL2O00472 640 aaPredicted RBP11.97□□□□□ -0.49
SMPD3-207ENST00000566466 CRKLP46109 303 aaKnown RBP11.97□□□□□ -0.49
SMPD3-207ENST00000566466 BAG6P46379 1132 aa11.97□□□□□ -0.49
SMPD3-207ENST00000566466 PIP4K2AP48426 406 aaPredicted RBP11.97□□□□□ -0.49
SMPD3-207ENST00000566466 TWISTNBQ3B726 338 aaPredicted RBP11.97□□□□□ -0.49
SMPD3-207ENST00000566466 A1BGP04217 495 aa11.96□□□□□ -0.49
SMPD3-207ENST00000566466 C4AP0C0L4 1744 aa11.96□□□□□ -0.49
SMPD3-207ENST00000566466 SOS1Q07889 1333 aaPredicted RBP11.95□□□□□ -0.5
SMPD3-207ENST00000566466 ANXA1P04083 346 aa11.95□□□□□ -0.5
SMPD3-207ENST00000566466 QSER1Q2KHR3 1735 aa11.94□□□□□ -0.5
SMPD3-207ENST00000566466 TCERG1O14776 1098 aaKnown RBP11.94□□□□□ -0.5
SMPD3-207ENST00000566466 RC3H1Q5TC82 1133 aaKnown RBP11.94□□□□□ -0.5
SMPD3-207ENST00000566466 NECTIN2Q92692 538 aa11.94□□□□□ -0.5
SMPD3-207ENST00000566466 CCDC87Q9NVE4 849 aa11.94□□□□□ -0.5
SMPD3-207ENST00000566466 CHPF2Q9P2E5 772 aa11.94□□□□□ -0.5
SMPD3-207ENST00000566466 CASZ1Q86V15 1759 aa11.94□□□□□ -0.5
SMPD3-207ENST00000566466 ERBB4Q15303 1308 aa11.93□□□□□ -0.5
SMPD3-207ENST00000566466 PNPLA7Q6ZV29 1317 aa11.93□□□□□ -0.5
SMPD3-207ENST00000566466 SOCS7O14512 581 aa11.93□□□□□ -0.5
SMPD3-207ENST00000566466 EIF5P55010 431 aaKnown RBP11.93□□□□□ -0.5
SMPD3-207ENST00000566466 HDGFL1Q5TGJ6 251 aa11.93□□□□□ -0.5
SMPD3-207ENST00000566466 G2E3Q7L622 706 aa11.93□□□□□ -0.5
SMPD3-207ENST00000566466 SSH1Q8WYL5 1049 aa11.93□□□□□ -0.5
SMPD3-207ENST00000566466 SCN7AQ01118 1682 aa11.93□□□□□ -0.5
SMPD3-207ENST00000566466 BCORQ6W2J9 1755 aa11.92□□□□□ -0.5
SMPD3-207ENST00000566466 RPS6KA4O75676 772 aa11.92□□□□□ -0.5
SMPD3-207ENST00000566466 EIF2S2P20042 333 aaKnown RBP11.92□□□□□ -0.5
SMPD3-207ENST00000566466 RARSP54136 660 aaKnown RBP11.92□□□□□ -0.5
SMPD3-207ENST00000566466 SF3B2Q13435 895 aaKnown RBP11.92□□□□□ -0.5
SMPD3-207ENST00000566466 MRPL50Q8N5N7 158 aaKnown RBP11.92□□□□□ -0.5
SMPD3-207ENST00000566466 TEX13AQ9BXU3 409 aaPredicted RBP11.92□□□□□ -0.5
SMPD3-207ENST00000566466 PDGFDQ9GZP0 370 aaPredicted RBP11.92□□□□□ -0.5
SMPD3-207ENST00000566466 COL15A1P39059 1388 aa11.92□□□□□ -0.5
SMPD3-207ENST00000566466 CT47B1P0C2W7 299 aaPredicted RBP11.91□□□□□ -0.5
SMPD3-207ENST00000566466 SLC15A2Q16348 729 aa11.91□□□□□ -0.5
SMPD3-207ENST00000566466 PHAXQ9H814 394 aaKnown RBP11.91□□□□□ -0.5
SMPD3-207ENST00000566466 BCL2L12Q9HB09 334 aa11.91□□□□□ -0.5
SMPD3-207ENST00000566466 DDX21Q9NR30 783 aaKnown RBP eCLIP11.91□□□□□ -0.5
SMPD3-207ENST00000566466 GNPATO15228 680 aa11.9□□□□□ -0.5
SMPD3-207ENST00000566466 BCAR3O75815 825 aa11.9□□□□□ -0.5
SMPD3-207ENST00000566466 STARD3NLO95772 234 aa11.9□□□□□ -0.5
SMPD3-207ENST00000566466 CANXP27824 592 aaKnown RBP11.9□□□□□ -0.5
SMPD3-207ENST00000566466 IL6STP40189 918 aaPredicted RBP11.9□□□□□ -0.5
SMPD3-207ENST00000566466 BRPF1P55201 1214 aaPredicted RBP11.9□□□□□ -0.5
SMPD3-207ENST00000566466 TTLL7Q6ZT98 887 aa11.9□□□□□ -0.5
SMPD3-207ENST00000566466 BCL2L13Q9BXK5 485 aa11.9□□□□□ -0.5
SMPD3-207ENST00000566466 U3KPZ7 1027 aaPredicted RBP11.9□□□□□ -0.5
SMPD3-207ENST00000566466 ADCY9O60503 1353 aa11.9□□□□□ -0.5
SMPD3-207ENST00000566466 ATXN8OSP0DMR3 200 aa11.89□□□□□ -0.51
SMPD3-207ENST00000566466 ALDH1L2Q3SY69 923 aa11.89□□□□□ -0.51
SMPD3-207ENST00000566466 COL23A1Q86Y22 540 aaPredicted RBP11.89□□□□□ -0.51
SMPD3-207ENST00000566466 TNNQ9UQP3 1299 aa11.89□□□□□ -0.51
SMPD3-207ENST00000566466 COL24A1Q17RW2 1714 aa11.89□□□□□ -0.51
SMPD3-207ENST00000566466 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.88□□□□□ -0.51
SMPD3-207ENST00000566466 CAMTA2O94983 1202 aa11.88□□□□□ -0.51
SMPD3-207ENST00000566466 MYL6BP14649 208 aa11.88□□□□□ -0.51
SMPD3-207ENST00000566466 SSFA2P28290 1259 aa11.88□□□□□ -0.51
SMPD3-207ENST00000566466 CCDC30Q5VVM6 783 aa11.88□□□□□ -0.51
SMPD3-207ENST00000566466 XAGE3Q8WTP9 111 aa11.88□□□□□ -0.51
SMPD3-207ENST00000566466 ARHGEF1Q92888 912 aaKnown RBP11.88□□□□□ -0.51
SMPD3-207ENST00000566466 ZNF428Q96B54 188 aa11.88□□□□□ -0.51
SMPD3-207ENST00000566466 DBF4Q9UBU7 674 aaPredicted RBP11.88□□□□□ -0.51
SMPD3-207ENST00000566466 SRP68Q9UHB9 627 aaKnown RBP11.88□□□□□ -0.51
SMPD3-207ENST00000566466 USP42Q9H9J4 1324 aaKnown RBP11.87□□□□□ -0.51
SMPD3-207ENST00000566466 AK7Q96M32 723 aa11.87□□□□□ -0.51
SMPD3-207ENST00000566466 ARFGEF2Q9Y6D5 1785 aa11.87□□□□□ -0.51
SMPD3-207ENST00000566466 RNF123Q5XPI4 1314 aa11.86□□□□□ -0.51
SMPD3-207ENST00000566466 PHF14O94880 888 aa11.86□□□□□ -0.51
SMPD3-207ENST00000566466 FLIIQ13045 1269 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms