RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 PCDH11XQ9BZA7 1347 aa21.43■■□□□ 1.02
RAB40C-210ENST00000566290 PCDH11YQ9BZA8 1340 aa21.43■■□□□ 1.02
RAB40C-210ENST00000566290 CEMIPQ8WUJ3 1361 aa21.43■■□□□ 1.02
RAB40C-210ENST00000566290 MVPQ14764 893 aaKnown RBP21.42■■□□□ 1.02
RAB40C-210ENST00000566290 RTF1Q92541 710 aaKnown RBP21.42■■□□□ 1.02
RAB40C-210ENST00000566290 SYTL4Q96C24 671 aaPredicted RBP21.42■■□□□ 1.02
RAB40C-210ENST00000566290 TUBGCP6Q96RT7 1819 aa21.41■■□□□ 1.02
RAB40C-210ENST00000566290 ADCY9O60503 1353 aa21.41■■□□□ 1.02
RAB40C-210ENST00000566290 GNAT3A8MTJ3 354 aa21.41■■□□□ 1.02
RAB40C-210ENST00000566290 TCERG1O14776 1098 aaKnown RBP21.41■■□□□ 1.02
RAB40C-210ENST00000566290 THUMPD2Q9BTF0 503 aaKnown RBP21.41■■□□□ 1.02
RAB40C-210ENST00000566290 TOGARAM1Q9Y4F4 1720 aa21.41■■□□□ 1.02
RAB40C-210ENST00000566290 TRIM27P14373 513 aa21.4■■□□□ 1.02
RAB40C-210ENST00000566290 TWISTNBQ3B726 338 aaPredicted RBP21.4■■□□□ 1.02
RAB40C-210ENST00000566290 AMOTQ4VCS5 1084 aa21.4■■□□□ 1.02
RAB40C-210ENST00000566290 SLC27A3Q5K4L6 730 aa21.4■■□□□ 1.02
RAB40C-210ENST00000566290 FRAT1Q92837 279 aaPredicted RBP21.4■■□□□ 1.02
RAB40C-210ENST00000566290 CHMP4BQ9H444 224 aaKnown RBP21.39■■□□□ 1.01
RAB40C-210ENST00000566290 DDX19BQ9UMR2 479 aa21.39■■□□□ 1.01
RAB40C-210ENST00000566290 KDM3BQ7LBC6 1761 aa21.38■■□□□ 1.01
RAB40C-210ENST00000566290 MRPL50Q8N5N7 158 aaKnown RBP21.38■■□□□ 1.01
RAB40C-210ENST00000566290 PANK1Q8TE04 598 aa21.38■■□□□ 1.01
RAB40C-210ENST00000566290 SPG7Q9UQ90 795 aa21.38■■□□□ 1.01
RAB40C-210ENST00000566290 RLBP1P12271 317 aa21.37■■□□□ 1.01
RAB40C-210ENST00000566290 NKX1-1Q15270 411 aaPredicted RBP21.37■■□□□ 1.01
RAB40C-210ENST00000566290 FTSJ3Q8IY81 847 aaKnown RBP21.37■■□□□ 1.01
RAB40C-210ENST00000566290 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.37■■□□□ 1.01
RAB40C-210ENST00000566290 COG6Q9Y2V7 657 aa21.37■■□□□ 1.01
RAB40C-210ENST00000566290 KIF3CO14782 793 aa21.36■■□□□ 1.01
RAB40C-210ENST00000566290 PHKG2P15735 406 aa21.36■■□□□ 1.01
RAB40C-210ENST00000566290 DNAJC5GQ8N7S2 189 aa21.36■■□□□ 1.01
RAB40C-210ENST00000566290 CACNA1FO60840 1977 aa21.36■■□□□ 1.01
RAB40C-210ENST00000566290 ABCC4O15439 1325 aa21.35■■□□□ 1.01
RAB40C-210ENST00000566290 MCM10Q7L590 875 aa21.35■■□□□ 1.01
RAB40C-210ENST00000566290 COL23A1Q86Y22 540 aaPredicted RBP21.35■■□□□ 1.01
RAB40C-210ENST00000566290 BCL2L13Q9BXK5 485 aa21.35■■□□□ 1.01
RAB40C-210ENST00000566290 SIPA1L3O60292 1781 aaPredicted RBP21.34■■□□□ 1.01
RAB40C-210ENST00000566290 MSH5O43196 834 aa21.34■■□□□ 1.01
RAB40C-210ENST00000566290 DCTN1Q14203 1278 aa21.34■■□□□ 1.01
RAB40C-210ENST00000566290 MSL1Q68DK7 614 aa21.34■■□□□ 1.01
RAB40C-210ENST00000566290 C8orf58Q8NAV2 365 aa21.34■■□□□ 1.01
RAB40C-210ENST00000566290 API5Q9BZZ5 524 aaKnown RBP21.34■■□□□ 1.01
RAB40C-210ENST00000566290 NOB1Q9ULX3 412 aaKnown RBP21.34■■□□□ 1.01
RAB40C-210ENST00000566290 LAS1LQ9Y4W2 734 aaKnown RBP21.34■■□□□ 1.01
RAB40C-210ENST00000566290 N4BP2Q86UW6 1770 aaPredicted RBP21.33■■□□□ 1.01
RAB40C-210ENST00000566290 PLEKHO1Q53GL0 409 aaPredicted RBP21.33■■□□□ 1.01
RAB40C-210ENST00000566290 MPRIPQ6WCQ1 1025 aa21.33■■□□□ 1.01
RAB40C-210ENST00000566290 IFNL2Q8IZJ0 200 aa21.33■■□□□ 1.01
RAB40C-210ENST00000566290 TSPYL6Q8N831 410 aa21.33■■□□□ 1.01
RAB40C-210ENST00000566290 ITGB4P16144 1822 aa21.33■■□□□ 1.01
RAB40C-210ENST00000566290 APLP1P51693 650 aa21.32■■□□□ 1
RAB40C-210ENST00000566290 AKAP4Q5JQC9 854 aa21.32■■□□□ 1
RAB40C-210ENST00000566290 CHMP4AQ9BY43 222 aa21.32■■□□□ 1
RAB40C-210ENST00000566290 PTPRCP08575 1304 aa21.31■■□□□ 1
RAB40C-210ENST00000566290 CAPN15O75808 1086 aa21.31■■□□□ 1
RAB40C-210ENST00000566290 PIGBQ92521 554 aa21.31■■□□□ 1
RAB40C-210ENST00000566290 LY75O60449 1722 aa21.31■■□□□ 1
RAB40C-210ENST00000566290 VIRMAQ69YN4 1812 aaKnown RBP21.31■■□□□ 1
RAB40C-210ENST00000566290 HOXB7P09629 217 aa21.3■■□□□ 1
RAB40C-210ENST00000566290 COL13A1Q5TAT6 717 aaPredicted RBP21.3■■□□□ 1
RAB40C-210ENST00000566290 ZNF530Q6P9A1 599 aaPredicted RBP21.3■■□□□ 1
RAB40C-210ENST00000566290 CD2APQ9Y5K6 639 aa21.3■■□□□ 1
RAB40C-210ENST00000566290 TAF7Q15545 349 aaPredicted RBP21.29■■□□□ 1
RAB40C-210ENST00000566290 IL17REQ8NFR9 667 aa21.29■■□□□ 1
RAB40C-210ENST00000566290 TSPYL4Q9UJ04 414 aa21.29■■□□□ 1
RAB40C-210ENST00000566290 WWC3Q9ULE0 1092 aa21.29■■□□□ 1
RAB40C-210ENST00000566290 KDM6AO15550 1401 aaPredicted RBP21.29■■□□□ 1
RAB40C-210ENST00000566290 MRC1P22897 1456 aa21.28■■□□□ 1
RAB40C-210ENST00000566290 HDAC1Q13547 482 aaPredicted RBP21.28■■□□□ 1
RAB40C-210ENST00000566290 RBM19Q9Y4C8 960 aaKnown RBP21.28■■□□□ 1
RAB40C-210ENST00000566290 ZBTB40Q9NUA8 1239 aa21.27■■□□□ 1
RAB40C-210ENST00000566290 TNNQ9UQP3 1299 aa21.27■■□□□ 1
RAB40C-210ENST00000566290 PXDNLA1KZ92 1463 aa21.26■□□□□ 0.99
RAB40C-210ENST00000566290 SCN11AQ9UI33 1791 aa21.26■□□□□ 0.99
RAB40C-210ENST00000566290 RWDD1Q9H446 243 aaPredicted RBP21.26■□□□□ 0.99
RAB40C-210ENST00000566290 CCNL1Q9UK58 526 aaPredicted RBP21.26■□□□□ 0.99
RAB40C-210ENST00000566290 PALLDQ8WX93 1383 aa21.25■□□□□ 0.99
RAB40C-210ENST00000566290 TMEM57Q8N5G2 664 aa21.25■□□□□ 0.99
RAB40C-210ENST00000566290 INTS3Q68E01 1043 aaKnown RBP21.24■□□□□ 0.99
RAB40C-210ENST00000566290 ASAP1Q9ULH1 1129 aa21.24■□□□□ 0.99
RAB40C-210ENST00000566290 DCAF5Q96JK2 942 aa21.23■□□□□ 0.99
RAB40C-210ENST00000566290 TMOD3Q9NYL9 352 aa21.23■□□□□ 0.99
RAB40C-210ENST00000566290 PCDHB15Q9Y5E8 787 aa21.23■□□□□ 0.99
RAB40C-210ENST00000566290 ITPRIPQ8IWB1 547 aa21.22■□□□□ 0.99
RAB40C-210ENST00000566290 IGHDP01880 384 aa21.21■□□□□ 0.99
RAB40C-210ENST00000566290 C1orf141Q5JVX7 400 aa21.21■□□□□ 0.99
RAB40C-210ENST00000566290 ATG3Q9NT62 314 aa21.21■□□□□ 0.99
RAB40C-210ENST00000566290 HEG1Q9ULI3 1381 aa21.21■□□□□ 0.99
RAB40C-210ENST00000566290 ERVV-2B6SEH9 535 aa21.2■□□□□ 0.98
RAB40C-210ENST00000566290 HSP90AB1P08238 724 aaKnown RBP21.2■□□□□ 0.98
RAB40C-210ENST00000566290 LGR6Q9HBX8 967 aa21.2■□□□□ 0.98
RAB40C-210ENST00000566290 ZBTB7BO15156 539 aaPredicted RBP21.19■□□□□ 0.98
RAB40C-210ENST00000566290 TOMM70O94826 608 aa21.19■□□□□ 0.98
RAB40C-210ENST00000566290 HTRA3P83110 453 aa21.19■□□□□ 0.98
RAB40C-210ENST00000566290 CCDC30Q5VVM6 783 aa21.19■□□□□ 0.98
RAB40C-210ENST00000566290 RNMTO43148 476 aaKnown RBP21.18■□□□□ 0.98
RAB40C-210ENST00000566290 SMARCC1Q92922 1105 aaPredicted RBP21.18■□□□□ 0.98
RAB40C-210ENST00000566290 C5P01031 1676 aa21.18■□□□□ 0.98
RAB40C-210ENST00000566290 ELL2O00472 640 aaPredicted RBP21.17■□□□□ 0.98
RAB40C-210ENST00000566290 PRELPP51888 382 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms