RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.38■□□□□ 0.21
SHCBP1-204ENST00000565887 GIGYF1O75420 1035 aaPredicted RBP16.38■□□□□ 0.21
SHCBP1-204ENST00000565887 ZNF853P0CG23 659 aa16.38■□□□□ 0.21
SHCBP1-204ENST00000565887 INTS5Q6P9B9 1019 aaKnown RBP16.38■□□□□ 0.21
SHCBP1-204ENST00000565887 COL23A1Q86Y22 540 aaPredicted RBP16.38■□□□□ 0.21
SHCBP1-204ENST00000565887 QSER1Q2KHR3 1735 aa16.38■□□□□ 0.21
SHCBP1-204ENST00000565887 A0A087WZG4 1122 aa16.37■□□□□ 0.21
SHCBP1-204ENST00000565887 RFC4P35249 363 aa16.37■□□□□ 0.21
SHCBP1-204ENST00000565887 HOXB7P09629 217 aa16.36■□□□□ 0.21
SHCBP1-204ENST00000565887 USP16Q9Y5T5 823 aa16.36■□□□□ 0.21
SHCBP1-204ENST00000565887 IL6STP40189 918 aaPredicted RBP16.35■□□□□ 0.21
SHCBP1-204ENST00000565887 NLGN1Q8N2Q7 840 aa16.35■□□□□ 0.21
SHCBP1-204ENST00000565887 ARHGEF1Q92888 912 aaKnown RBP16.35■□□□□ 0.21
SHCBP1-204ENST00000565887 SOS1Q07889 1333 aaPredicted RBP16.35■□□□□ 0.21
SHCBP1-204ENST00000565887 COL5A3P25940 1745 aaPredicted RBP16.34■□□□□ 0.21
SHCBP1-204ENST00000565887 PHF14O94880 888 aa16.34■□□□□ 0.21
SHCBP1-204ENST00000565887 POLD1P28340 1107 aa16.34■□□□□ 0.21
SHCBP1-204ENST00000565887 MBIPQ9NS73 344 aa16.34■□□□□ 0.21
SHCBP1-204ENST00000565887 ERBB4Q15303 1308 aa16.34■□□□□ 0.21
SHCBP1-204ENST00000565887 KDM3BQ7LBC6 1761 aa16.33■□□□□ 0.21
SHCBP1-204ENST00000565887 ZPR1O75312 459 aa16.33■□□□□ 0.2
SHCBP1-204ENST00000565887 ZBTB7AO95365 584 aa16.33■□□□□ 0.2
SHCBP1-204ENST00000565887 CANXP27824 592 aaKnown RBP16.33■□□□□ 0.2
SHCBP1-204ENST00000565887 EIF5P55010 431 aaKnown RBP16.33■□□□□ 0.2
SHCBP1-204ENST00000565887 PDGFDQ9GZP0 370 aaPredicted RBP16.33■□□□□ 0.2
SHCBP1-204ENST00000565887 ZBTB1Q9Y2K1 713 aa16.33■□□□□ 0.2
SHCBP1-204ENST00000565887 TJP1Q07157 1748 aa16.33■□□□□ 0.2
SHCBP1-204ENST00000565887 A1BGP04217 495 aa16.32■□□□□ 0.2
SHCBP1-204ENST00000565887 UBR3Q6ZT12 1888 aa16.32■□□□□ 0.2
SHCBP1-204ENST00000565887 SALL2Q9Y467 1007 aaPredicted RBP16.32■□□□□ 0.2
SHCBP1-204ENST00000565887 MYH14Q7Z406 1995 aaKnown RBP16.31■□□□□ 0.2
SHCBP1-204ENST00000565887 CASZ1Q86V15 1759 aa16.31■□□□□ 0.2
SHCBP1-204ENST00000565887 MYH16Q9H6N6 1097 aa16.31■□□□□ 0.2
SHCBP1-204ENST00000565887 NARFQ9UHQ1 456 aa16.31■□□□□ 0.2
SHCBP1-204ENST00000565887 ATF5Q9Y2D1 282 aaPredicted RBP16.31■□□□□ 0.2
SHCBP1-204ENST00000565887 RGL2O15211 777 aa16.3■□□□□ 0.2
SHCBP1-204ENST00000565887 GOLGA2Q08379 1002 aa16.3■□□□□ 0.2
SHCBP1-204ENST00000565887 PRAMEF22A3QJZ6 481 aa16.29■□□□□ 0.2
SHCBP1-204ENST00000565887 DUSP27Q5VZP5 1158 aa16.29■□□□□ 0.2
SHCBP1-204ENST00000565887 AMIGO3Q86WK7 504 aa16.29■□□□□ 0.2
SHCBP1-204ENST00000565887 PPP1R1BQ9UD71 204 aaPredicted RBP16.29■□□□□ 0.2
SHCBP1-204ENST00000565887 COL15A1P39059 1388 aa16.28■□□□□ 0.2
SHCBP1-204ENST00000565887 USP42Q9H9J4 1324 aaKnown RBP16.28■□□□□ 0.2
SHCBP1-204ENST00000565887 EIF2S2P20042 333 aaKnown RBP16.28■□□□□ 0.2
SHCBP1-204ENST00000565887 PTGER2P43116 358 aa16.28■□□□□ 0.2
SHCBP1-204ENST00000565887 TUBGCP6Q96RT7 1819 aa16.28■□□□□ 0.2
SHCBP1-204ENST00000565887 GYS1P13807 737 aa16.27■□□□□ 0.2
SHCBP1-204ENST00000565887 CLEC4GQ6UXB4 293 aa16.27■□□□□ 0.2
SHCBP1-204ENST00000565887 ARXQ96QS3 562 aa16.27■□□□□ 0.2
SHCBP1-204ENST00000565887 SGIP1Q9BQI5 828 aa16.27■□□□□ 0.2
SHCBP1-204ENST00000565887 ZNF521Q96K83 1311 aa16.26■□□□□ 0.19
SHCBP1-204ENST00000565887 NBPF26B4DH59 902 aa16.26■□□□□ 0.19
SHCBP1-204ENST00000565887 E9PSI1 815 aa16.26■□□□□ 0.19
SHCBP1-204ENST00000565887 HDGFL1Q5TGJ6 251 aa16.26■□□□□ 0.19
SHCBP1-204ENST00000565887 NBPF10Q6P3W6 841 aaKnown RBP16.26■□□□□ 0.19
SHCBP1-204ENST00000565887 SMIM5Q71RC9 77 aa16.26■□□□□ 0.19
SHCBP1-204ENST00000565887 DZIP3Q86Y13 1208 aaKnown RBP16.26■□□□□ 0.19
SHCBP1-204ENST00000565887 NBPF15Q8N660 670 aa16.26■□□□□ 0.19
SHCBP1-204ENST00000565887 DDX21Q9NR30 783 aaKnown RBP eCLIP16.26■□□□□ 0.19
SHCBP1-204ENST00000565887 DBF4Q9UBU7 674 aaPredicted RBP16.26■□□□□ 0.19
SHCBP1-204ENST00000565887 ZNF652Q9Y2D9 606 aa16.26■□□□□ 0.19
SHCBP1-204ENST00000565887 ZNF330Q9Y3S2 320 aaPredicted RBP16.26■□□□□ 0.19
SHCBP1-204ENST00000565887 LRP5O75197 1615 aa16.26■□□□□ 0.19
SHCBP1-204ENST00000565887 SENP3-EIF4A1A0A087X0R7 540 aa16.25■□□□□ 0.19
SHCBP1-204ENST00000565887 CCDC30Q5VVM6 783 aa16.25■□□□□ 0.19
SHCBP1-204ENST00000565887 USPL1Q5W0Q7 1092 aa16.25■□□□□ 0.19
SHCBP1-204ENST00000565887 ERVV-1B6SEH8 477 aa16.24■□□□□ 0.19
SHCBP1-204ENST00000565887 TSR2Q969E8 191 aaKnown RBP16.24■□□□□ 0.19
SHCBP1-204ENST00000565887 HYPKQ9NX55 129 aa16.24■□□□□ 0.19
SHCBP1-204ENST00000565887 TBC1D2BQ9UPU7 963 aa16.24■□□□□ 0.19
SHCBP1-204ENST00000565887 PARP3Q9Y6F1 533 aa16.24■□□□□ 0.19
SHCBP1-204ENST00000565887 MYL6BP14649 208 aa16.23■□□□□ 0.19
SHCBP1-204ENST00000565887 TWISTNBQ3B726 338 aaPredicted RBP16.23■□□□□ 0.19
SHCBP1-204ENST00000565887 MSL1Q68DK7 614 aa16.23■□□□□ 0.19
SHCBP1-204ENST00000565887 KIF6Q6ZMV9 814 aa16.23■□□□□ 0.19
SHCBP1-204ENST00000565887 C8orf58Q8NAV2 365 aa16.23■□□□□ 0.19
SHCBP1-204ENST00000565887 SRP68Q9UHB9 627 aaKnown RBP16.23■□□□□ 0.19
SHCBP1-204ENST00000565887 LAMB4A4D0S4 1761 aa16.23■□□□□ 0.19
SHCBP1-204ENST00000565887 COL24A1Q17RW2 1714 aa16.22■□□□□ 0.19
SHCBP1-204ENST00000565887 FANCIQ9NVI1 1328 aa16.22■□□□□ 0.19
SHCBP1-204ENST00000565887 ELL2O00472 640 aaPredicted RBP16.22■□□□□ 0.19
SHCBP1-204ENST00000565887 MMP10P09238 476 aa16.22■□□□□ 0.19
SHCBP1-204ENST00000565887 TM4SF1P30408 202 aa16.22■□□□□ 0.19
SHCBP1-204ENST00000565887 FKBP8Q14318 412 aa16.22■□□□□ 0.19
SHCBP1-204ENST00000565887 PDIA6Q15084 440 aa16.22■□□□□ 0.19
SHCBP1-204ENST00000565887 KRT24Q2M2I5 525 aa16.22■□□□□ 0.19
SHCBP1-204ENST00000565887 CAMTA2O94983 1202 aa16.21■□□□□ 0.19
SHCBP1-204ENST00000565887 STK31Q9BXU1 1019 aa16.21■□□□□ 0.19
SHCBP1-204ENST00000565887 PIP4K2AP48426 406 aaPredicted RBP16.2■□□□□ 0.18
SHCBP1-204ENST00000565887 SLFN5Q08AF3 891 aa16.2■□□□□ 0.18
SHCBP1-204ENST00000565887 ZNF428Q96B54 188 aa16.2■□□□□ 0.18
SHCBP1-204ENST00000565887 SETDB2Q96T68 719 aa16.2■□□□□ 0.18
SHCBP1-204ENST00000565887 CD2APQ9Y5K6 639 aa16.2■□□□□ 0.18
SHCBP1-204ENST00000565887 MAP3K15Q6ZN16 1313 aa16.19■□□□□ 0.18
SHCBP1-204ENST00000565887 VAMP4O75379 141 aa16.19■□□□□ 0.18
SHCBP1-204ENST00000565887 HNRNPUQ00839 825 aaKnown RBP eCLIP16.19■□□□□ 0.18
SHCBP1-204ENST00000565887 EXOSC9Q06265 439 aaKnown RBP16.19■□□□□ 0.18
SHCBP1-204ENST00000565887 TSPYL6Q8N831 410 aa16.19■□□□□ 0.18
SHCBP1-204ENST00000565887 NECTIN2Q92692 538 aa16.19■□□□□ 0.18
SHCBP1-204ENST00000565887 BCL2L12Q9HB09 334 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms