RNA–Protein interactions for RNA: ENST00000565848.1

NR4A1-221, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 2

Gene NR4A1, Length 691 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-221ENST00000565848 EIF4A1P60842 406 aaKnown RBP16.13■□□□□ 0.17
NR4A1-221ENST00000565848 ATG3Q9NT62 314 aa16.13■□□□□ 0.17
NR4A1-221ENST00000565848 MIS18AQ9NYP9 233 aa16.13■□□□□ 0.17
NR4A1-221ENST00000565848 TSPYL4Q9UJ04 414 aa16.13■□□□□ 0.17
NR4A1-221ENST00000565848 TJP1Q07157 1748 aa16.13■□□□□ 0.17
NR4A1-221ENST00000565848 NLGN2Q8NFZ4 835 aa16.12■□□□□ 0.17
NR4A1-221ENST00000565848 SLC39A6Q13433 755 aa16.11■□□□□ 0.17
NR4A1-221ENST00000565848 LRRC4BQ9NT99 713 aa16.11■□□□□ 0.17
NR4A1-221ENST00000565848 ASAP1Q9ULH1 1129 aa16.11■□□□□ 0.17
NR4A1-221ENST00000565848 SOS1Q07889 1333 aaPredicted RBP16.11■□□□□ 0.17
NR4A1-221ENST00000565848 KCNQ4P56696 695 aa16.1■□□□□ 0.17
NR4A1-221ENST00000565848 TFCP2L1Q9NZI6 479 aa16.1■□□□□ 0.17
NR4A1-221ENST00000565848 COL5A3P25940 1745 aaPredicted RBP16.1■□□□□ 0.17
NR4A1-221ENST00000565848 CT47B1P0C2W7 299 aaPredicted RBP16.09■□□□□ 0.17
NR4A1-221ENST00000565848 EXOSC9Q06265 439 aaKnown RBP16.09■□□□□ 0.17
NR4A1-221ENST00000565848 C8orf58Q8NAV2 365 aa16.09■□□□□ 0.17
NR4A1-221ENST00000565848 ZNF526Q8TF50 670 aaPredicted RBP16.09■□□□□ 0.17
NR4A1-221ENST00000565848 ZNF496Q96IT1 587 aaPredicted RBP16.09■□□□□ 0.17
NR4A1-221ENST00000565848 LAS1LQ9Y4W2 734 aaKnown RBP16.09■□□□□ 0.17
NR4A1-221ENST00000565848 KAT6BQ8WYB5 2073 aa16.09■□□□□ 0.17
NR4A1-221ENST00000565848 CEP350Q5VT06 3117 aa16.08■□□□□ 0.17
NR4A1-221ENST00000565848 GRIN3BO60391 1043 aa16.08■□□□□ 0.16
NR4A1-221ENST00000565848 HOXB7P09629 217 aa16.08■□□□□ 0.16
NR4A1-221ENST00000565848 KRT24Q2M2I5 525 aa16.08■□□□□ 0.16
NR4A1-221ENST00000565848 VSIG10Q8N0Z9 540 aa16.08■□□□□ 0.16
NR4A1-221ENST00000565848 TSPYL6Q8N831 410 aa16.08■□□□□ 0.16
NR4A1-221ENST00000565848 SLC16A10Q8TF71 515 aa16.08■□□□□ 0.16
NR4A1-221ENST00000565848 SLC4A9Q96Q91 983 aa16.08■□□□□ 0.16
NR4A1-221ENST00000565848 TAF1LQ8IZX4 1826 aa16.08■□□□□ 0.16
NR4A1-221ENST00000565848 VAMP4O75379 141 aa16.07■□□□□ 0.16
NR4A1-221ENST00000565848 YBX3P16989 372 aaKnown RBP eCLIP16.07■□□□□ 0.16
NR4A1-221ENST00000565848 SYTL4Q96C24 671 aaPredicted RBP16.07■□□□□ 0.16
NR4A1-221ENST00000565848 PALLDQ8WX93 1383 aa16.07■□□□□ 0.16
NR4A1-221ENST00000565848 SMARCC1Q92922 1105 aaPredicted RBP16.06■□□□□ 0.16
NR4A1-221ENST00000565848 AKT1S1Q96B36 256 aa16.06■□□□□ 0.16
NR4A1-221ENST00000565848 FMNL2Q96PY5 1086 aa16.06■□□□□ 0.16
NR4A1-221ENST00000565848 GPBP1L1Q9HC44 474 aaPredicted RBP16.06■□□□□ 0.16
NR4A1-221ENST00000565848 TTC5Q8N0Z6 440 aa16.05■□□□□ 0.16
NR4A1-221ENST00000565848 ZNF428Q96B54 188 aa16.05■□□□□ 0.16
NR4A1-221ENST00000565848 CACNA1FO60840 1977 aa16.05■□□□□ 0.16
NR4A1-221ENST00000565848 PNPLA7Q6ZV29 1317 aa16.04■□□□□ 0.16
NR4A1-221ENST00000565848 TWISTNBQ3B726 338 aaPredicted RBP16.04■□□□□ 0.16
NR4A1-221ENST00000565848 CHD4Q14839 1912 aa16.04■□□□□ 0.16
NR4A1-221ENST00000565848 PRAMEF22A3QJZ6 481 aa16.03■□□□□ 0.16
NR4A1-221ENST00000565848 LOC102724428A0A0B4J2F2 783 aa16.02■□□□□ 0.16
NR4A1-221ENST00000565848 SNRPA1P09661 255 aaKnown RBP16.02■□□□□ 0.16
NR4A1-221ENST00000565848 HSPA6P17066 643 aa16.02■□□□□ 0.16
NR4A1-221ENST00000565848 BRPF1P55201 1214 aaPredicted RBP16.02■□□□□ 0.16
NR4A1-221ENST00000565848 SIK1P57059 783 aa16.02■□□□□ 0.16
NR4A1-221ENST00000565848 SLC27A3Q5K4L6 730 aa16.02■□□□□ 0.16
NR4A1-221ENST00000565848 MSL1Q68DK7 614 aa16.02■□□□□ 0.16
NR4A1-221ENST00000565848 MYH14Q7Z406 1995 aaKnown RBP16.01■□□□□ 0.15
NR4A1-221ENST00000565848 PTCD1O75127 700 aaKnown RBP16.01■□□□□ 0.15
NR4A1-221ENST00000565848 ATP10DQ9P241 1426 aa16.01■□□□□ 0.15
NR4A1-221ENST00000565848 RARSP54136 660 aaKnown RBP16■□□□□ 0.15
NR4A1-221ENST00000565848 ITPK1Q13572 414 aa16■□□□□ 0.15
NR4A1-221ENST00000565848 ALDH1L2Q3SY69 923 aa16■□□□□ 0.15
NR4A1-221ENST00000565848 LRP10Q7Z4F1 713 aa16■□□□□ 0.15
NR4A1-221ENST00000565848 WWC3Q9ULE0 1092 aa16■□□□□ 0.15
NR4A1-221ENST00000565848 USP16Q9Y5T5 823 aa16■□□□□ 0.15
NR4A1-221ENST00000565848 ELL2O00472 640 aaPredicted RBP15.99■□□□□ 0.15
NR4A1-221ENST00000565848 PDIA6Q15084 440 aa15.99■□□□□ 0.15
NR4A1-221ENST00000565848 TEX13AQ9BXU3 409 aaPredicted RBP15.99■□□□□ 0.15
NR4A1-221ENST00000565848 C4BP0C0L5 1744 aa15.99■□□□□ 0.15
NR4A1-221ENST00000565848 GOLGB1Q14789 3259 aaKnown RBP15.99■□□□□ 0.15
NR4A1-221ENST00000565848 ERBB4Q15303 1308 aa15.98■□□□□ 0.15
NR4A1-221ENST00000565848 RNF123Q5XPI4 1314 aa15.98■□□□□ 0.15
NR4A1-221ENST00000565848 CYP19A1P11511 503 aaPredicted RBP15.98■□□□□ 0.15
NR4A1-221ENST00000565848 DNAJC10Q8IXB1 793 aa15.98■□□□□ 0.15
NR4A1-221ENST00000565848 COL23A1Q86Y22 540 aaPredicted RBP15.97■□□□□ 0.15
NR4A1-221ENST00000565848 SSH1Q8WYL5 1049 aa15.97■□□□□ 0.15
NR4A1-221ENST00000565848 RBM42Q9BTD8 480 aaKnown RBP15.97■□□□□ 0.15
NR4A1-221ENST00000565848 RCAN3Q9UKA8 241 aa15.97■□□□□ 0.15
NR4A1-221ENST00000565848 SLC4A2P04920 1241 aa15.96■□□□□ 0.15
NR4A1-221ENST00000565848 HDGFL1Q5TGJ6 251 aa15.96■□□□□ 0.15
NR4A1-221ENST00000565848 CHMP4AQ9BY43 222 aa15.96■□□□□ 0.15
NR4A1-221ENST00000565848 CCNL1Q9UK58 526 aaPredicted RBP15.96■□□□□ 0.15
NR4A1-221ENST00000565848 CNTNAP4Q9C0A0 1308 aa15.95■□□□□ 0.14
NR4A1-221ENST00000565848 NBPF26B4DH59 902 aa15.95■□□□□ 0.14
NR4A1-221ENST00000565848 ATP6V1AP38606 617 aa15.95■□□□□ 0.14
NR4A1-221ENST00000565848 CCDC30Q5VVM6 783 aa15.95■□□□□ 0.14
NR4A1-221ENST00000565848 NBPF10Q6P3W6 841 aaKnown RBP15.95■□□□□ 0.14
NR4A1-221ENST00000565848 MRPL50Q8N5N7 158 aaKnown RBP15.95■□□□□ 0.14
NR4A1-221ENST00000565848 NBPF15Q8N660 670 aa15.95■□□□□ 0.14
NR4A1-221ENST00000565848 LINC00116Q8NCU8 138 aa15.95■□□□□ 0.14
NR4A1-221ENST00000565848 UBR3Q6ZT12 1888 aa15.95■□□□□ 0.14
NR4A1-221ENST00000565848 CENPBP07199 599 aaPredicted RBP15.94■□□□□ 0.14
NR4A1-221ENST00000565848 INTS5Q6P9B9 1019 aaKnown RBP15.94■□□□□ 0.14
NR4A1-221ENST00000565848 DDX21Q9NR30 783 aaKnown RBP eCLIP15.94■□□□□ 0.14
NR4A1-221ENST00000565848 DBF4Q9UBU7 674 aaPredicted RBP15.94■□□□□ 0.14
NR4A1-221ENST00000565848 N4BP2Q86UW6 1770 aaPredicted RBP15.93■□□□□ 0.14
NR4A1-221ENST00000565848 BCAR3O75815 825 aa15.93■□□□□ 0.14
NR4A1-221ENST00000565848 RC3H1Q5TC82 1133 aaKnown RBP15.93■□□□□ 0.14
NR4A1-221ENST00000565848 CHPF2Q9P2E5 772 aa15.93■□□□□ 0.14
NR4A1-221ENST00000565848 QSER1Q2KHR3 1735 aa15.93■□□□□ 0.14
NR4A1-221ENST00000565848 TUBGCP6Q96RT7 1819 aa15.92■□□□□ 0.14
NR4A1-221ENST00000565848 STARD3NLO95772 234 aa15.92■□□□□ 0.14
NR4A1-221ENST00000565848 A1BGP04217 495 aa15.92■□□□□ 0.14
NR4A1-221ENST00000565848 EIF2S2P20042 333 aaKnown RBP15.92■□□□□ 0.14
NR4A1-221ENST00000565848 CRKLP46109 303 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms