RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 PCDHB15Q9Y5E8 787 aa7.96□□□□□ -1.14
CHD9-217ENST00000565832 SPDYE16A6NNV3 312 aaPredicted RBP7.95□□□□□ -1.14
CHD9-217ENST00000565832 KCNQ3O43525 872 aa7.95□□□□□ -1.14
CHD9-217ENST00000565832 ZNF530Q6P9A1 599 aaPredicted RBP7.95□□□□□ -1.14
CHD9-217ENST00000565832 GPIHBP1Q8IV16 184 aa7.95□□□□□ -1.14
CHD9-217ENST00000565832 FTSJ3Q8IY81 847 aaKnown RBP7.95□□□□□ -1.14
CHD9-217ENST00000565832 TMEM57Q8N5G2 664 aa7.95□□□□□ -1.14
CHD9-217ENST00000565832 PRDM11Q9NQV5 511 aa7.95□□□□□ -1.14
CHD9-217ENST00000565832 MAP3K5Q99683 1374 aa7.95□□□□□ -1.14
CHD9-217ENST00000565832 PIP4K2BP78356 416 aa7.94□□□□□ -1.14
CHD9-217ENST00000565832 TAF7Q15545 349 aaPredicted RBP7.94□□□□□ -1.14
CHD9-217ENST00000565832 ALDH1L2Q3SY69 923 aa7.94□□□□□ -1.14
CHD9-217ENST00000565832 PLEKHO1Q53GL0 409 aaPredicted RBP7.94□□□□□ -1.14
CHD9-217ENST00000565832 BARGINQ6ZT62 677 aa7.94□□□□□ -1.14
CHD9-217ENST00000565832 ITPRIPQ8IWB1 547 aa7.94□□□□□ -1.14
CHD9-217ENST00000565832 STRN4Q9NRL3 753 aa7.94□□□□□ -1.14
CHD9-217ENST00000565832 USP35Q9P2H5 1018 aa7.94□□□□□ -1.14
CHD9-217ENST00000565832 COLQQ9Y215 455 aaPredicted RBP7.94□□□□□ -1.14
CHD9-217ENST00000565832 COL18A1P39060 1754 aa7.94□□□□□ -1.14
CHD9-217ENST00000565832 MVPQ14764 893 aaKnown RBP7.94□□□□□ -1.14
CHD9-217ENST00000565832 TMEM92Q6UXU6 159 aa7.94□□□□□ -1.14
CHD9-217ENST00000565832 G2E3Q7L622 706 aa7.94□□□□□ -1.14
CHD9-217ENST00000565832 KDM2BQ8NHM5 1336 aa7.94□□□□□ -1.14
CHD9-217ENST00000565832 PHRF1Q9P1Y6 1649 aaKnown RBP7.93□□□□□ -1.14
CHD9-217ENST00000565832 HTATSF1O43719 755 aaKnown RBP7.93□□□□□ -1.14
CHD9-217ENST00000565832 SEC24BO95487 1268 aa7.93□□□□□ -1.14
CHD9-217ENST00000565832 AKAP4Q5JQC9 854 aa7.93□□□□□ -1.14
CHD9-217ENST00000565832 LARP1Q6PKG0 1096 aaKnown RBP7.93□□□□□ -1.14
CHD9-217ENST00000565832 TOM1L2Q6ZVM7 507 aa7.93□□□□□ -1.14
CHD9-217ENST00000565832 RAPGEF4Q8WZA2 1011 aa7.93□□□□□ -1.14
CHD9-217ENST00000565832 L3MBTL3Q96JM7 780 aaPredicted RBP7.93□□□□□ -1.14
CHD9-217ENST00000565832 CAMTA1Q9Y6Y1 1673 aa7.92□□□□□ -1.14
CHD9-217ENST00000565832 IPO8O15397 1037 aaKnown RBP7.92□□□□□ -1.14
CHD9-217ENST00000565832 RNMTO43148 476 aaKnown RBP7.92□□□□□ -1.14
CHD9-217ENST00000565832 C1orf141Q5JVX7 400 aa7.92□□□□□ -1.14
CHD9-217ENST00000565832 DCBLD2Q96PD2 775 aa7.92□□□□□ -1.14
CHD9-217ENST00000565832 RBM19Q9Y4C8 960 aaKnown RBP7.92□□□□□ -1.14
CHD9-217ENST00000565832 CEMIPQ8WUJ3 1361 aa7.91□□□□□ -1.14
CHD9-217ENST00000565832 PRAMEF22A3QJZ6 481 aa7.91□□□□□ -1.14
CHD9-217ENST00000565832 BTBD11A6QL63 1104 aa7.91□□□□□ -1.14
CHD9-217ENST00000565832 CYP27B1O15528 508 aa7.91□□□□□ -1.14
CHD9-217ENST00000565832 EIF2S2P20042 333 aaKnown RBP7.91□□□□□ -1.14
CHD9-217ENST00000565832 SLC39A6Q13433 755 aa7.91□□□□□ -1.14
CHD9-217ENST00000565832 AMOTQ4VCS5 1084 aa7.91□□□□□ -1.14
CHD9-217ENST00000565832 UPF1Q92900 1129 aaKnown RBP eCLIP7.91□□□□□ -1.14
CHD9-217ENST00000565832 ZNF428Q96B54 188 aa7.91□□□□□ -1.14
CHD9-217ENST00000565832 C1orf115Q9H7X2 142 aa7.91□□□□□ -1.14
CHD9-217ENST00000565832 CRYBG1Q9Y4K1 1723 aa7.91□□□□□ -1.14
CHD9-217ENST00000565832 LTBP4Q8N2S1 1624 aa7.91□□□□□ -1.14
CHD9-217ENST00000565832 CPDO75976 1380 aa7.91□□□□□ -1.14
CHD9-217ENST00000565832 KIF16BQ96L93 1317 aa7.91□□□□□ -1.14
CHD9-217ENST00000565832 F6X3S4 739 aa7.91□□□□□ -1.14
CHD9-217ENST00000565832 TATP17735 454 aaPredicted RBP7.91□□□□□ -1.14
CHD9-217ENST00000565832 EVA1CP58658 441 aa7.91□□□□□ -1.14
CHD9-217ENST00000565832 MAP3K9P80192 1104 aa7.91□□□□□ -1.14
CHD9-217ENST00000565832 TEFQ10587 303 aa7.91□□□□□ -1.14
CHD9-217ENST00000565832 NFATC2IPQ8NCF5 419 aa7.91□□□□□ -1.14
CHD9-217ENST00000565832 BTG4Q9NY30 223 aa7.91□□□□□ -1.14
CHD9-217ENST00000565832 MEGF6O75095 1541 aa7.91□□□□□ -1.14
CHD9-217ENST00000565832 ZBTB7BO15156 539 aaPredicted RBP7.9□□□□□ -1.14
CHD9-217ENST00000565832 ANXA1P04083 346 aa7.9□□□□□ -1.14
CHD9-217ENST00000565832 RGS3P49796 1198 aa7.9□□□□□ -1.14
CHD9-217ENST00000565832 CENPQQ7L2Z9 268 aaPredicted RBP7.9□□□□□ -1.14
CHD9-217ENST00000565832 ZBTB40Q9NUA8 1239 aa7.9□□□□□ -1.14
CHD9-217ENST00000565832 NCAPD2Q15021 1401 aa7.9□□□□□ -1.14
CHD9-217ENST00000565832 ROBO1Q9Y6N7 1651 aa7.9□□□□□ -1.15
CHD9-217ENST00000565832 ADAMTS2O95450 1211 aa7.9□□□□□ -1.15
CHD9-217ENST00000565832 EIF4A1P60842 406 aaKnown RBP7.9□□□□□ -1.15
CHD9-217ENST00000565832 KAT6BQ8WYB5 2073 aa7.9□□□□□ -1.15
CHD9-217ENST00000565832 WDR17Q8IZU2 1322 aa7.89□□□□□ -1.15
CHD9-217ENST00000565832 GRXCR2A6NFK2 248 aa7.89□□□□□ -1.15
CHD9-217ENST00000565832 PHKG2P15735 406 aa7.89□□□□□ -1.15
CHD9-217ENST00000565832 DDX54Q8TDD1 881 aaKnown RBP7.89□□□□□ -1.15
CHD9-217ENST00000565832 ARHGAP45Q92619 1136 aa7.89□□□□□ -1.15
CHD9-217ENST00000565832 PHAXQ9H814 394 aaKnown RBP7.89□□□□□ -1.15
CHD9-217ENST00000565832 DDX19BQ9UMR2 479 aa7.89□□□□□ -1.15
CHD9-217ENST00000565832 POTEFA5A3E0 1075 aa7.88□□□□□ -1.15
CHD9-217ENST00000565832 NUTM2BA6NNL0 878 aaPredicted RBP7.88□□□□□ -1.15
CHD9-217ENST00000565832 NUTM2EB1AL46 878 aaPredicted RBP7.88□□□□□ -1.15
CHD9-217ENST00000565832 SLC4A10Q6U841 1118 aa7.88□□□□□ -1.15
CHD9-217ENST00000565832 NUTM2AQ8IVF1 878 aaPredicted RBP7.88□□□□□ -1.15
CHD9-217ENST00000565832 KRI1Q8N9T8 703 aaKnown RBP7.88□□□□□ -1.15
CHD9-217ENST00000565832 SPG7Q9UQ90 795 aa7.88□□□□□ -1.15
CHD9-217ENST00000565832 VIRMAQ69YN4 1812 aaKnown RBP7.88□□□□□ -1.15
CHD9-217ENST00000565832 NHSL1Q5SYE7 1610 aa7.88□□□□□ -1.15
CHD9-217ENST00000565832 MS4A1P11836 297 aa7.88□□□□□ -1.15
CHD9-217ENST00000565832 FAM208AQ9UK61 1670 aaKnown RBP7.88□□□□□ -1.15
CHD9-217ENST00000565832 ABCC4O15439 1325 aa7.87□□□□□ -1.15
CHD9-217ENST00000565832 COL5A2P05997 1499 aaPredicted RBP7.87□□□□□ -1.15
CHD9-217ENST00000565832 HDGFL1Q5TGJ6 251 aa7.87□□□□□ -1.15
CHD9-217ENST00000565832 IFNL2Q8IZJ0 200 aa7.87□□□□□ -1.15
CHD9-217ENST00000565832 AK7Q96M32 723 aa7.87□□□□□ -1.15
CHD9-217ENST00000565832 BCL11AQ9H165 835 aa7.87□□□□□ -1.15
CHD9-217ENST00000565832 LMO7Q8WWI1 1683 aa7.87□□□□□ -1.15
CHD9-217ENST00000565832 RGS12O14924 1447 aa7.87□□□□□ -1.15
CHD9-217ENST00000565832 KDM6AO15550 1401 aaPredicted RBP7.87□□□□□ -1.15
CHD9-217ENST00000565832 UBAP1LF5GYI3 381 aa7.87□□□□□ -1.15
CHD9-217ENST00000565832 PROSER3Q2NL68 480 aa7.87□□□□□ -1.15
CHD9-217ENST00000565832 CCDC30Q5VVM6 783 aa7.87□□□□□ -1.15
CHD9-217ENST00000565832 SIRT2Q8IXJ6 389 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms