RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 SOS1Q07889 1333 aaPredicted RBP20.3■□□□□ 0.84
COMMD4-212ENST00000565517 CCDC184Q52MB2 194 aa20.3■□□□□ 0.84
COMMD4-212ENST00000565517 NLGN1Q8N2Q7 840 aa20.3■□□□□ 0.84
COMMD4-212ENST00000565517 SYT17Q9BSW7 474 aa20.3■□□□□ 0.84
COMMD4-212ENST00000565517 SNRPA1P09661 255 aaKnown RBP20.29■□□□□ 0.84
COMMD4-212ENST00000565517 THUMPD2Q9BTF0 503 aaKnown RBP20.29■□□□□ 0.84
COMMD4-212ENST00000565517 ZBTB1Q9Y2K1 713 aa20.29■□□□□ 0.84
COMMD4-212ENST00000565517 BABAM1Q9NWV8 329 aa20.28■□□□□ 0.84
COMMD4-212ENST00000565517 GYS1P13807 737 aa20.27■□□□□ 0.84
COMMD4-212ENST00000565517 MIS18AQ9NYP9 233 aa20.27■□□□□ 0.84
COMMD4-212ENST00000565517 RRP7AQ9Y3A4 280 aaKnown RBP20.27■□□□□ 0.84
COMMD4-212ENST00000565517 USP42Q9H9J4 1324 aaKnown RBP20.27■□□□□ 0.83
COMMD4-212ENST00000565517 NEUROD2Q15784 382 aa20.26■□□□□ 0.83
COMMD4-212ENST00000565517 MRS2Q9HD23 443 aa20.26■□□□□ 0.83
COMMD4-212ENST00000565517 TRIM35Q9UPQ4 493 aa20.26■□□□□ 0.83
COMMD4-212ENST00000565517 USP16Q9Y5T5 823 aa20.26■□□□□ 0.83
COMMD4-212ENST00000565517 COL15A1P39059 1388 aa20.25■□□□□ 0.83
COMMD4-212ENST00000565517 CANXP27824 592 aaKnown RBP20.25■□□□□ 0.83
COMMD4-212ENST00000565517 EIF5P55010 431 aaKnown RBP20.25■□□□□ 0.83
COMMD4-212ENST00000565517 ZPR1O75312 459 aa20.24■□□□□ 0.83
COMMD4-212ENST00000565517 IL6STP40189 918 aaPredicted RBP20.24■□□□□ 0.83
COMMD4-212ENST00000565517 EIF4A1P60842 406 aaKnown RBP20.24■□□□□ 0.83
COMMD4-212ENST00000565517 NARFQ9UHQ1 456 aa20.24■□□□□ 0.83
COMMD4-212ENST00000565517 LAMB4A4D0S4 1761 aa20.23■□□□□ 0.83
COMMD4-212ENST00000565517 A0A087WZG4 1122 aa20.23■□□□□ 0.83
COMMD4-212ENST00000565517 APAF1O14727 1248 aa20.23■□□□□ 0.83
COMMD4-212ENST00000565517 A1BGP04217 495 aa20.23■□□□□ 0.83
COMMD4-212ENST00000565517 SRP68Q9UHB9 627 aaKnown RBP20.23■□□□□ 0.83
COMMD4-212ENST00000565517 CD2APQ9Y5K6 639 aa20.23■□□□□ 0.83
COMMD4-212ENST00000565517 PRAMEF22A3QJZ6 481 aa20.22■□□□□ 0.83
COMMD4-212ENST00000565517 DCAF8L1A6NGE4 600 aa20.22■□□□□ 0.83
COMMD4-212ENST00000565517 GIGYF1O75420 1035 aaPredicted RBP20.22■□□□□ 0.83
COMMD4-212ENST00000565517 MMP10P09238 476 aa20.22■□□□□ 0.83
COMMD4-212ENST00000565517 TSPYL4Q9UJ04 414 aa20.22■□□□□ 0.83
COMMD4-212ENST00000565517 CHL1O00533 1208 aa20.2■□□□□ 0.82
COMMD4-212ENST00000565517 FKBP8Q14318 412 aa20.2■□□□□ 0.82
COMMD4-212ENST00000565517 USPL1Q5W0Q7 1092 aa20.2■□□□□ 0.82
COMMD4-212ENST00000565517 KLHL34Q8N239 644 aa20.2■□□□□ 0.82
COMMD4-212ENST00000565517 KIF13BQ9NQT8 1826 aa20.2■□□□□ 0.82
COMMD4-212ENST00000565517 NPM2Q86SE8 214 aaKnown RBP20.19■□□□□ 0.82
COMMD4-212ENST00000565517 TM4SF1P30408 202 aa20.18■□□□□ 0.82
COMMD4-212ENST00000565517 PARP3Q9Y6F1 533 aa20.18■□□□□ 0.82
COMMD4-212ENST00000565517 CALD1Q05682 793 aaKnown RBP20.17■□□□□ 0.82
COMMD4-212ENST00000565517 NCBP3Q53F19 620 aaKnown RBP20.17■□□□□ 0.82
COMMD4-212ENST00000565517 BCL2L12Q9HB09 334 aa20.17■□□□□ 0.82
COMMD4-212ENST00000565517 NLGN2Q8NFZ4 835 aa20.16■□□□□ 0.82
COMMD4-212ENST00000565517 CFAP44Q96MT7 982 aa20.16■□□□□ 0.82
COMMD4-212ENST00000565517 SCN7AQ01118 1682 aa20.16■□□□□ 0.82
COMMD4-212ENST00000565517 NBPF26B4DH59 902 aa20.15■□□□□ 0.82
COMMD4-212ENST00000565517 NBPF10Q6P3W6 841 aaKnown RBP20.15■□□□□ 0.82
COMMD4-212ENST00000565517 NBPF15Q8N660 670 aa20.15■□□□□ 0.82
COMMD4-212ENST00000565517 ZNF330Q9Y3S2 320 aaPredicted RBP20.15■□□□□ 0.82
COMMD4-212ENST00000565517 BCORQ6W2J9 1755 aa20.14■□□□□ 0.81
COMMD4-212ENST00000565517 ERBB4Q15303 1308 aa20.14■□□□□ 0.81
COMMD4-212ENST00000565517 CCDC27Q2M243 656 aa20.14■□□□□ 0.81
COMMD4-212ENST00000565517 TBC1D2BQ9UPU7 963 aa20.14■□□□□ 0.81
COMMD4-212ENST00000565517 AFDNP55196 1824 aaKnown RBP20.13■□□□□ 0.81
COMMD4-212ENST00000565517 POLRMTO00411 1230 aaKnown RBP20.13■□□□□ 0.81
COMMD4-212ENST00000565517 RGL2O15211 777 aa20.13■□□□□ 0.81
COMMD4-212ENST00000565517 ZNF853P0CG23 659 aa20.13■□□□□ 0.81
COMMD4-212ENST00000565517 DDR1Q08345 913 aa20.13■□□□□ 0.81
COMMD4-212ENST00000565517 NFIXQ14938 502 aa20.13■□□□□ 0.81
COMMD4-212ENST00000565517 DZIP3Q86Y13 1208 aaKnown RBP20.13■□□□□ 0.81
COMMD4-212ENST00000565517 LAS1LQ9Y4W2 734 aaKnown RBP20.13■□□□□ 0.81
COMMD4-212ENST00000565517 NRXN2Q9P2S2 1712 aa20.13■□□□□ 0.81
COMMD4-212ENST00000565517 C10orf71Q711Q0 1435 aa20.12■□□□□ 0.81
COMMD4-212ENST00000565517 CAMTA2O94983 1202 aa20.12■□□□□ 0.81
COMMD4-212ENST00000565517 PIP4K2AP48426 406 aaPredicted RBP20.12■□□□□ 0.81
COMMD4-212ENST00000565517 TGFB2P61812 414 aa20.12■□□□□ 0.81
COMMD4-212ENST00000565517 IFT57Q9NWB7 429 aa20.12■□□□□ 0.81
COMMD4-212ENST00000565517 GNAI1P63096 354 aa20.11■□□□□ 0.81
COMMD4-212ENST00000565517 CLEC4GQ6UXB4 293 aa20.11■□□□□ 0.81
COMMD4-212ENST00000565517 HOXB7P09629 217 aa20.1■□□□□ 0.81
COMMD4-212ENST00000565517 KIAA1551Q9HCM1 1747 aa20.1■□□□□ 0.81
COMMD4-212ENST00000565517 GPR162Q16538 588 aa20.09■□□□□ 0.81
COMMD4-212ENST00000565517 MBIPQ9NS73 344 aa20.09■□□□□ 0.81
COMMD4-212ENST00000565517 N4BP2Q86UW6 1770 aaPredicted RBP20.08■□□□□ 0.81
COMMD4-212ENST00000565517 CHD4Q14839 1912 aa20.08■□□□□ 0.81
COMMD4-212ENST00000565517 SERPINB2P05120 415 aa20.08■□□□□ 0.81
COMMD4-212ENST00000565517 TBC1D9BQ66K14 1250 aa20.08■□□□□ 0.81
COMMD4-212ENST00000565517 WWC1Q8IX03 1113 aa20.08■□□□□ 0.81
COMMD4-212ENST00000565517 FAM9BQ8IZU0 186 aa20.08■□□□□ 0.81
COMMD4-212ENST00000565517 ZNF652Q9Y2D9 606 aa20.08■□□□□ 0.81
COMMD4-212ENST00000565517 EIF2S2P20042 333 aaKnown RBP20.07■□□□□ 0.8
COMMD4-212ENST00000565517 NGEFQ8N5V2 710 aa20.07■□□□□ 0.8
COMMD4-212ENST00000565517 NUP98P52948 1817 aa20.06■□□□□ 0.8
COMMD4-212ENST00000565517 ERVV-1B6SEH8 477 aa20.06■□□□□ 0.8
COMMD4-212ENST00000565517 PDIA6Q15084 440 aa20.06■□□□□ 0.8
COMMD4-212ENST00000565517 SETDB2Q96T68 719 aa20.06■□□□□ 0.8
COMMD4-212ENST00000565517 CARMIL3Q8ND23 1372 aa20.06■□□□□ 0.8
COMMD4-212ENST00000565517 PXDNLA1KZ92 1463 aa20.05■□□□□ 0.8
COMMD4-212ENST00000565517 IL16Q14005 1332 aa20.05■□□□□ 0.8
COMMD4-212ENST00000565517 BRCA1P38398 1863 aaKnown RBP20.05■□□□□ 0.8
COMMD4-212ENST00000565517 MYL6BP14649 208 aa20.05■□□□□ 0.8
COMMD4-212ENST00000565517 KRT24Q2M2I5 525 aa20.05■□□□□ 0.8
COMMD4-212ENST00000565517 BICDL1Q6ZP65 573 aa20.05■□□□□ 0.8
COMMD4-212ENST00000565517 CCER2I3L3R5 266 aa20.04■□□□□ 0.8
COMMD4-212ENST00000565517 GRIN3BO60391 1043 aa20.04■□□□□ 0.8
COMMD4-212ENST00000565517 DUSP27Q5VZP5 1158 aa20.04■□□□□ 0.8
COMMD4-212ENST00000565517 LRP10Q7Z4F1 713 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms