RNA–Protein interactions for RNA: ENST00000565377.1

RPUSD1-205, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-205ENST00000565377 NPM2Q86SE8 214 aaKnown RBP26.02■■□□□ 1.76
RPUSD1-205ENST00000565377 GNPATO15228 680 aa26.01■■□□□ 1.75
RPUSD1-205ENST00000565377 ADRA2BP18089 450 aa26.01■■□□□ 1.75
RPUSD1-205ENST00000565377 TJP1Q07157 1748 aa26.01■■□□□ 1.75
RPUSD1-205ENST00000565377 ZNF827Q17R98 1081 aa26.01■■□□□ 1.75
RPUSD1-205ENST00000565377 COL5A3P25940 1745 aaPredicted RBP26■■□□□ 1.75
RPUSD1-205ENST00000565377 RPS6KA4O75676 772 aa26■■□□□ 1.75
RPUSD1-205ENST00000565377 R3HDM1Q15032 1099 aaKnown RBP26■■□□□ 1.75
RPUSD1-205ENST00000565377 ERBB4Q15303 1308 aa25.98■■□□□ 1.75
RPUSD1-205ENST00000565377 USP16Q9Y5T5 823 aa25.98■■□□□ 1.75
RPUSD1-205ENST00000565377 TRAPPC3LQ5T215 181 aa25.97■■□□□ 1.75
RPUSD1-205ENST00000565377 INTS5Q6P9B9 1019 aaKnown RBP25.97■■□□□ 1.75
RPUSD1-205ENST00000565377 FANCIQ9NVI1 1328 aa25.96■■□□□ 1.75
RPUSD1-205ENST00000565377 A0A087WZG4 1122 aa25.96■■□□□ 1.75
RPUSD1-205ENST00000565377 DUSP27Q5VZP5 1158 aa25.96■■□□□ 1.75
RPUSD1-205ENST00000565377 SLC16A10Q8TF71 515 aa25.96■■□□□ 1.75
RPUSD1-205ENST00000565377 IL6STP40189 918 aaPredicted RBP25.95■■□□□ 1.74
RPUSD1-205ENST00000565377 TSR2Q969E8 191 aaKnown RBP25.95■■□□□ 1.74
RPUSD1-205ENST00000565377 QSER1Q2KHR3 1735 aa25.94■■□□□ 1.74
RPUSD1-205ENST00000565377 ZBED9Q6R2W3 1325 aa25.94■■□□□ 1.74
RPUSD1-205ENST00000565377 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.94■■□□□ 1.74
RPUSD1-205ENST00000565377 PNPLA7Q6ZV29 1317 aa25.93■■□□□ 1.74
RPUSD1-205ENST00000565377 LAMB4A4D0S4 1761 aa25.93■■□□□ 1.74
RPUSD1-205ENST00000565377 CANXP27824 592 aaKnown RBP25.93■■□□□ 1.74
RPUSD1-205ENST00000565377 ZBTB1Q9Y2K1 713 aa25.93■■□□□ 1.74
RPUSD1-205ENST00000565377 PRAMEF22A3QJZ6 481 aa25.92■■□□□ 1.74
RPUSD1-205ENST00000565377 PSDA5PKW4 1024 aaPredicted RBP25.92■■□□□ 1.74
RPUSD1-205ENST00000565377 MSH5O43196 834 aa25.92■■□□□ 1.74
RPUSD1-205ENST00000565377 EIF2S2P20042 333 aaKnown RBP25.92■■□□□ 1.74
RPUSD1-205ENST00000565377 RFC4P35249 363 aa25.92■■□□□ 1.74
RPUSD1-205ENST00000565377 SLFN5Q08AF3 891 aa25.92■■□□□ 1.74
RPUSD1-205ENST00000565377 HDGFL1Q5TGJ6 251 aa25.92■■□□□ 1.74
RPUSD1-205ENST00000565377 PHF14O94880 888 aa25.91■■□□□ 1.74
RPUSD1-205ENST00000565377 A1BGP04217 495 aa25.91■■□□□ 1.74
RPUSD1-205ENST00000565377 TWISTNBQ3B726 338 aaPredicted RBP25.9■■□□□ 1.74
RPUSD1-205ENST00000565377 EIF5P55010 431 aaKnown RBP25.89■■□□□ 1.74
RPUSD1-205ENST00000565377 CCDC30Q5VVM6 783 aa25.89■■□□□ 1.74
RPUSD1-205ENST00000565377 COL23A1Q86Y22 540 aaPredicted RBP25.89■■□□□ 1.74
RPUSD1-205ENST00000565377 C8orf58Q8NAV2 365 aa25.89■■□□□ 1.74
RPUSD1-205ENST00000565377 SPINK5Q9NQ38 1064 aaPredicted RBP25.89■■□□□ 1.74
RPUSD1-205ENST00000565377 COL15A1P39059 1388 aa25.89■■□□□ 1.74
RPUSD1-205ENST00000565377 UBR3Q6ZT12 1888 aa25.89■■□□□ 1.73
RPUSD1-205ENST00000565377 KRT24Q2M2I5 525 aa25.88■■□□□ 1.73
RPUSD1-205ENST00000565377 ARHGEF1Q92888 912 aaKnown RBP25.88■■□□□ 1.73
RPUSD1-205ENST00000565377 DBF4Q9UBU7 674 aaPredicted RBP25.88■■□□□ 1.73
RPUSD1-205ENST00000565377 ZPR1O75312 459 aa25.87■■□□□ 1.73
RPUSD1-205ENST00000565377 EXOSC9Q06265 439 aaKnown RBP25.87■■□□□ 1.73
RPUSD1-205ENST00000565377 MYH14Q7Z406 1995 aaKnown RBP25.86■■□□□ 1.73
RPUSD1-205ENST00000565377 ELL2O00472 640 aaPredicted RBP25.86■■□□□ 1.73
RPUSD1-205ENST00000565377 CT47B1P0C2W7 299 aaPredicted RBP25.86■■□□□ 1.73
RPUSD1-205ENST00000565377 MTFR1LQ9H019 292 aa25.86■■□□□ 1.73
RPUSD1-205ENST00000565377 DDX21Q9NR30 783 aaKnown RBP eCLIP25.86■■□□□ 1.73
RPUSD1-205ENST00000565377 ZNF330Q9Y3S2 320 aaPredicted RBP25.86■■□□□ 1.73
RPUSD1-205ENST00000565377 TRMT2AQ8IZ69 625 aaKnown RBP25.85■■□□□ 1.73
RPUSD1-205ENST00000565377 ZNF428Q96B54 188 aa25.85■■□□□ 1.73
RPUSD1-205ENST00000565377 STK31Q9BXU1 1019 aa25.85■■□□□ 1.73
RPUSD1-205ENST00000565377 HYPKQ9NX55 129 aa25.84■■□□□ 1.73
RPUSD1-205ENST00000565377 NARFQ9UHQ1 456 aa25.84■■□□□ 1.73
RPUSD1-205ENST00000565377 NBPF26B4DH59 902 aa25.83■■□□□ 1.73
RPUSD1-205ENST00000565377 RGL2O15211 777 aa25.83■■□□□ 1.73
RPUSD1-205ENST00000565377 NBPF10Q6P3W6 841 aaKnown RBP25.83■■□□□ 1.73
RPUSD1-205ENST00000565377 NBPF15Q8N660 670 aa25.83■■□□□ 1.73
RPUSD1-205ENST00000565377 TSPYL6Q8N831 410 aa25.83■■□□□ 1.73
RPUSD1-205ENST00000565377 CDCA7LQ96GN5 454 aa25.83■■□□□ 1.73
RPUSD1-205ENST00000565377 TUBGCP6Q96RT7 1819 aa25.82■■□□□ 1.72
RPUSD1-205ENST00000565377 MYL6BP14649 208 aa25.82■■□□□ 1.72
RPUSD1-205ENST00000565377 KIF6Q6ZMV9 814 aa25.82■■□□□ 1.72
RPUSD1-205ENST00000565377 AMIGO3Q86WK7 504 aa25.82■■□□□ 1.72
RPUSD1-205ENST00000565377 NLGN1Q8N2Q7 840 aa25.82■■□□□ 1.72
RPUSD1-205ENST00000565377 NECTIN2Q92692 538 aa25.82■■□□□ 1.72
RPUSD1-205ENST00000565377 ARXQ96QS3 562 aa25.82■■□□□ 1.72
RPUSD1-205ENST00000565377 SPON1Q9HCB6 807 aa25.82■■□□□ 1.72
RPUSD1-205ENST00000565377 USP42Q9H9J4 1324 aaKnown RBP25.82■■□□□ 1.72
RPUSD1-205ENST00000565377 VAMP4O75379 141 aa25.81■■□□□ 1.72
RPUSD1-205ENST00000565377 DZIP3Q86Y13 1208 aaKnown RBP25.81■■□□□ 1.72
RPUSD1-205ENST00000565377 ZNF652Q9Y2D9 606 aa25.81■■□□□ 1.72
RPUSD1-205ENST00000565377 CASZ1Q86V15 1759 aa25.81■■□□□ 1.72
RPUSD1-205ENST00000565377 PDIA6Q15084 440 aa25.8■■□□□ 1.72
RPUSD1-205ENST00000565377 CHPF2Q9P2E5 772 aa25.8■■□□□ 1.72
RPUSD1-205ENST00000565377 POLD1P28340 1107 aa25.79■■□□□ 1.72
RPUSD1-205ENST00000565377 ZBTB7AO95365 584 aa25.78■■□□□ 1.72
RPUSD1-205ENST00000565377 PIP4K2AP48426 406 aaPredicted RBP25.78■■□□□ 1.72
RPUSD1-205ENST00000565377 CLEC4GQ6UXB4 293 aa25.78■■□□□ 1.72
RPUSD1-205ENST00000565377 ERVV-1B6SEH8 477 aa25.77■■□□□ 1.72
RPUSD1-205ENST00000565377 PDGFDQ9GZP0 370 aaPredicted RBP25.77■■□□□ 1.72
RPUSD1-205ENST00000565377 TBC1D2BQ9UPU7 963 aa25.77■■□□□ 1.72
RPUSD1-205ENST00000565377 GYS1P13807 737 aa25.76■■□□□ 1.71
RPUSD1-205ENST00000565377 USPL1Q5W0Q7 1092 aa25.76■■□□□ 1.71
RPUSD1-205ENST00000565377 SMIM5Q71RC9 77 aa25.76■■□□□ 1.71
RPUSD1-205ENST00000565377 DDX58O95786 925 aaKnown RBP25.75■■□□□ 1.71
RPUSD1-205ENST00000565377 MAP3K15Q6ZN16 1313 aa25.74■■□□□ 1.71
RPUSD1-205ENST00000565377 COPS6Q7L5N1 327 aa25.74■■□□□ 1.71
RPUSD1-205ENST00000565377 LRP10Q7Z4F1 713 aa25.74■■□□□ 1.71
RPUSD1-205ENST00000565377 SRP68Q9UHB9 627 aaKnown RBP25.74■■□□□ 1.71
RPUSD1-205ENST00000565377 C4AP0C0L4 1744 aa25.74■■□□□ 1.71
RPUSD1-205ENST00000565377 CAMTA2O94983 1202 aa25.73■■□□□ 1.71
RPUSD1-205ENST00000565377 SLC4A2P04920 1241 aa25.73■■□□□ 1.71
RPUSD1-205ENST00000565377 PROSER3Q2NL68 480 aa25.73■■□□□ 1.71
RPUSD1-205ENST00000565377 ATF5Q9Y2D1 282 aaPredicted RBP25.73■■□□□ 1.71
RPUSD1-205ENST00000565377 ALDH1L2Q3SY69 923 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms