RNA–Protein interactions for RNA: ENST00000565334.5

CDH5-205, Transcript of cadherin 5, humanhuman

TSL 5

Gene CDH5, Length 2,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-205ENST00000565334 PKNOX2Q96KN3 472 aa22.76■■□□□ 1.23
CDH5-205ENST00000565334 TUBGCP6Q96RT7 1819 aa22.76■■□□□ 1.23
CDH5-205ENST00000565334 ERBB3P21860 1342 aa22.75■■□□□ 1.23
CDH5-205ENST00000565334 SKOR2Q2VWA4 1001 aaPredicted RBP22.75■■□□□ 1.23
CDH5-205ENST00000565334 CLEC17AQ6ZS10 378 aa22.75■■□□□ 1.23
CDH5-205ENST00000565334 PPP1R42Q7Z4L9 355 aa22.75■■□□□ 1.23
CDH5-205ENST00000565334 PI4KAP2A4QPH2 592 aa22.75■■□□□ 1.23
CDH5-205ENST00000565334 KCNQ3O43525 872 aa22.75■■□□□ 1.23
CDH5-205ENST00000565334 MCCP23508 829 aa22.75■■□□□ 1.23
CDH5-205ENST00000565334 PI4KAP1Q8N8J0 262 aa22.75■■□□□ 1.23
CDH5-205ENST00000565334 ESYT1Q9BSJ8 1104 aa22.75■■□□□ 1.23
CDH5-205ENST00000565334 GIGYF1O75420 1035 aaPredicted RBP22.74■■□□□ 1.23
CDH5-205ENST00000565334 KIF1BPQ96EK5 621 aa22.74■■□□□ 1.23
CDH5-205ENST00000565334 CWC22Q9HCG8 908 aaKnown RBP22.74■■□□□ 1.23
CDH5-205ENST00000565334 ADCY9O60503 1353 aa22.74■■□□□ 1.23
CDH5-205ENST00000565334 ISY1Q9ULR0 285 aaKnown RBP22.73■■□□□ 1.23
CDH5-205ENST00000565334 ANAPC15P60006 121 aa22.73■■□□□ 1.23
CDH5-205ENST00000565334 MTX1Q13505 466 aa22.73■■□□□ 1.23
CDH5-205ENST00000565334 SIPA1L3O60292 1781 aaPredicted RBP22.73■■□□□ 1.23
CDH5-205ENST00000565334 NUCB2P80303 420 aa22.72■■□□□ 1.23
CDH5-205ENST00000565334 HYPKQ9NX55 129 aa22.72■■□□□ 1.23
CDH5-205ENST00000565334 AXIN2Q9Y2T1 843 aa22.72■■□□□ 1.23
CDH5-205ENST00000565334 SURF6O75683 361 aaKnown RBP22.72■■□□□ 1.23
CDH5-205ENST00000565334 ATF3P18847 181 aa22.72■■□□□ 1.23
CDH5-205ENST00000565334 CHMLP26374 656 aa22.72■■□□□ 1.23
CDH5-205ENST00000565334 RHPN1Q8TCX5 695 aa22.72■■□□□ 1.23
CDH5-205ENST00000565334 SRGAP3O43295 1099 aa22.71■■□□□ 1.23
CDH5-205ENST00000565334 MCM2P49736 904 aa22.71■■□□□ 1.23
CDH5-205ENST00000565334 KSR2Q6VAB6 950 aa22.71■■□□□ 1.23
CDH5-205ENST00000565334 IL17RAQ96F46 866 aa22.71■■□□□ 1.23
CDH5-205ENST00000565334 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.71■■□□□ 1.23
CDH5-205ENST00000565334 GOLGA6L3A6NEY3 463 aa22.7■■□□□ 1.22
CDH5-205ENST00000565334 TRIM6-TRIM34B2RNG4 842 aa22.7■■□□□ 1.22
CDH5-205ENST00000565334 GOLGA6L22H0YM25 854 aa22.7■■□□□ 1.22
CDH5-205ENST00000565334 FSD2A1L4K1 749 aa22.69■■□□□ 1.22
CDH5-205ENST00000565334 NBPF7P0C2Y1 421 aaPredicted RBP22.69■■□□□ 1.22
CDH5-205ENST00000565334 RAPGEF4Q8WZA2 1011 aa22.69■■□□□ 1.22
CDH5-205ENST00000565334 DDX58O95786 925 aaKnown RBP22.69■■□□□ 1.22
CDH5-205ENST00000565334 RILPL2Q969X0 211 aa22.69■■□□□ 1.22
CDH5-205ENST00000565334 TATP17735 454 aaPredicted RBP22.67■■□□□ 1.22
CDH5-205ENST00000565334 FOXD4L1Q9NU39 408 aa22.67■■□□□ 1.22
CDH5-205ENST00000565334 SPG7Q9UQ90 795 aa22.67■■□□□ 1.22
CDH5-205ENST00000565334 USP42Q9H9J4 1324 aaKnown RBP22.67■■□□□ 1.22
CDH5-205ENST00000565334 TMEM94Q12767 1356 aa22.67■■□□□ 1.22
CDH5-205ENST00000565334 TSHZ3Q63HK5 1081 aa22.66■■□□□ 1.22
CDH5-205ENST00000565334 DDX21Q9NR30 783 aaKnown RBP eCLIP22.66■■□□□ 1.22
CDH5-205ENST00000565334 MAP3K2Q9Y2U5 619 aa22.66■■□□□ 1.22
CDH5-205ENST00000565334 IL1RAPL2Q9NP60 686 aa22.66■■□□□ 1.22
CDH5-205ENST00000565334 TTC41PQ6P2S7 1318 aa22.66■■□□□ 1.22
CDH5-205ENST00000565334 NPHP3Q7Z494 1330 aa22.66■■□□□ 1.22
CDH5-205ENST00000565334 ERC1Q8IUD2 1116 aa22.65■■□□□ 1.22
CDH5-205ENST00000565334 CADPS2Q86UW7 1296 aa22.64■■□□□ 1.22
CDH5-205ENST00000565334 LINS1Q8NG48 757 aa22.64■■□□□ 1.22
CDH5-205ENST00000565334 C9orf78Q9NZ63 289 aaPredicted RBP22.64■■□□□ 1.22
CDH5-205ENST00000565334 TNS3Q68CZ2 1445 aa22.64■■□□□ 1.21
CDH5-205ENST00000565334 UTYO14607 1347 aa22.64■■□□□ 1.21
CDH5-205ENST00000565334 ANXA1P04083 346 aa22.64■■□□□ 1.21
CDH5-205ENST00000565334 CYP2E1P05181 493 aaPredicted RBP22.64■■□□□ 1.21
CDH5-205ENST00000565334 SSFA2P28290 1259 aa22.64■■□□□ 1.21
CDH5-205ENST00000565334 ZC3H6P61129 1189 aaKnown RBP22.64■■□□□ 1.21
CDH5-205ENST00000565334 PI4K2BQ8TCG2 481 aa22.64■■□□□ 1.21
CDH5-205ENST00000565334 CNTROBQ8N137 903 aa22.63■■□□□ 1.21
CDH5-205ENST00000565334 SLC52A2Q9HAB3 445 aa22.63■■□□□ 1.21
CDH5-205ENST00000565334 ANO2Q9NQ90 1003 aa22.63■■□□□ 1.21
CDH5-205ENST00000565334 NUTM1Q86Y26 1132 aa22.63■■□□□ 1.21
CDH5-205ENST00000565334 PHKG2P15735 406 aa22.62■■□□□ 1.21
CDH5-205ENST00000565334 ZNF790Q6PG37 636 aa22.62■■□□□ 1.21
CDH5-205ENST00000565334 NLRP2Q9NX02 1062 aa22.62■■□□□ 1.21
CDH5-205ENST00000565334 COL18A1P39060 1754 aa22.62■■□□□ 1.21
CDH5-205ENST00000565334 RGPD5Q99666 1765 aa22.62■■□□□ 1.21
CDH5-205ENST00000565334 PLEKHG5O94827 1062 aa22.61■■□□□ 1.21
CDH5-205ENST00000565334 IFNL2Q8IZJ0 200 aa22.61■■□□□ 1.21
CDH5-205ENST00000565334 MRC1P22897 1456 aa22.61■■□□□ 1.21
CDH5-205ENST00000565334 KDM6AO15550 1401 aaPredicted RBP22.61■■□□□ 1.21
CDH5-205ENST00000565334 BAG4O95429 457 aaKnown RBP22.61■■□□□ 1.21
CDH5-205ENST00000565334 SCN11AQ9UI33 1791 aa22.61■■□□□ 1.21
CDH5-205ENST00000565334 GLRX3O76003 335 aaKnown RBP22.6■■□□□ 1.21
CDH5-205ENST00000565334 MRE11P49959 708 aa22.6■■□□□ 1.21
CDH5-205ENST00000565334 PROSER3Q2NL68 480 aa22.6■■□□□ 1.21
CDH5-205ENST00000565334 UNC5CLQ8IV45 518 aa22.6■■□□□ 1.21
CDH5-205ENST00000565334 CLASRPQ8N2M8 674 aaKnown RBP22.6■■□□□ 1.21
CDH5-205ENST00000565334 GZF1Q9H116 711 aaPredicted RBP22.6■■□□□ 1.21
CDH5-205ENST00000565334 NEK4P51957 841 aa22.6■■□□□ 1.21
CDH5-205ENST00000565334 OS9Q13438 667 aaPredicted RBP22.6■■□□□ 1.21
CDH5-205ENST00000565334 GPATCH3Q96I76 525 aa22.6■■□□□ 1.21
CDH5-205ENST00000565334 CRYBG1Q9Y4K1 1723 aa22.59■■□□□ 1.21
CDH5-205ENST00000565334 CPDO75976 1380 aa22.59■■□□□ 1.21
CDH5-205ENST00000565334 GRM8O00222 908 aa22.58■■□□□ 1.21
CDH5-205ENST00000565334 LARP1Q6PKG0 1096 aaKnown RBP22.58■■□□□ 1.21
CDH5-205ENST00000565334 MEGF6O75095 1541 aa22.58■■□□□ 1.21
CDH5-205ENST00000565334 PDIA6Q15084 440 aa22.58■■□□□ 1.2
CDH5-205ENST00000565334 HSPA4P34932 840 aa22.57■■□□□ 1.2
CDH5-205ENST00000565334 INTS4Q96HW7 963 aaKnown RBP22.57■■□□□ 1.2
CDH5-205ENST00000565334 DCAF5Q96JK2 942 aa22.57■■□□□ 1.2
CDH5-205ENST00000565334 SGSM2O43147 1006 aa22.57■■□□□ 1.2
CDH5-205ENST00000565334 CUL4AQ13619 759 aa22.57■■□□□ 1.2
CDH5-205ENST00000565334 PRAMEF22A3QJZ6 481 aa22.56■■□□□ 1.2
CDH5-205ENST00000565334 KLHL40Q2TBA0 621 aa22.56■■□□□ 1.2
CDH5-205ENST00000565334 RAD50Q92878 1312 aa22.56■■□□□ 1.2
CDH5-205ENST00000565334 CSB-PGBD3P0DP91 1061 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms