RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 RAPGEF6Q8TEU7 1601 aa6.76□□□□□ -1.33
CAPN3-214ENST00000565274 ADCY10Q96PN6 1610 aa6.76□□□□□ -1.33
CAPN3-214ENST00000565274 CDK13Q14004 1512 aaKnown RBP6.76□□□□□ -1.33
CAPN3-214ENST00000565274 CNTLNQ9NXG0 1405 aa6.76□□□□□ -1.33
CAPN3-214ENST00000565274 SYNJ2O15056 1496 aa6.75□□□□□ -1.33
CAPN3-214ENST00000565274 CCDC7Q96M83 1385 aa6.75□□□□□ -1.33
CAPN3-214ENST00000565274 PLEKHD1A6NEE1 506 aa6.75□□□□□ -1.33
CAPN3-214ENST00000565274 NEUROD2Q15784 382 aa6.75□□□□□ -1.33
CAPN3-214ENST00000565274 TUSC1Q2TAM9 212 aa6.75□□□□□ -1.33
CAPN3-214ENST00000565274 TMTC2Q8N394 836 aa6.75□□□□□ -1.33
CAPN3-214ENST00000565274 AGBL1Q96MI9 1066 aa6.75□□□□□ -1.33
CAPN3-214ENST00000565274 COL25A1Q9BXS0 654 aaPredicted RBP6.75□□□□□ -1.33
CAPN3-214ENST00000565274 GPATCH8Q9UKJ3 1502 aaKnown RBP6.75□□□□□ -1.33
CAPN3-214ENST00000565274 ZNF608Q9ULD9 1512 aaPredicted RBP6.75□□□□□ -1.33
CAPN3-214ENST00000565274 UHRF1BP1Q6BDS2 1440 aa6.75□□□□□ -1.33
CAPN3-214ENST00000565274 PZPP20742 1482 aa6.74□□□□□ -1.33
CAPN3-214ENST00000565274 MBD5Q9P267 1494 aa6.74□□□□□ -1.33
CAPN3-214ENST00000565274 SHANK2Q9UPX8 1470 aa6.74□□□□□ -1.33
CAPN3-214ENST00000565274 CDC14CA4D256 554 aa6.74□□□□□ -1.33
CAPN3-214ENST00000565274 RELBQ01201 579 aa6.74□□□□□ -1.33
CAPN3-214ENST00000565274 KCNMA1Q12791 1236 aa6.74□□□□□ -1.33
CAPN3-214ENST00000565274 OS9Q13438 667 aaPredicted RBP6.74□□□□□ -1.33
CAPN3-214ENST00000565274 ZBTB33Q86T24 672 aa6.74□□□□□ -1.33
CAPN3-214ENST00000565274 CCDC155Q8N6L0 562 aa6.74□□□□□ -1.33
CAPN3-214ENST00000565274 LRRN4Q8WUT4 740 aa6.74□□□□□ -1.33
CAPN3-214ENST00000565274 TRIM52Q96A61 297 aa6.74□□□□□ -1.33
CAPN3-214ENST00000565274 SLC10A4Q96EP9 437 aa6.74□□□□□ -1.33
CAPN3-214ENST00000565274 KCTD15Q96SI1 283 aaPredicted RBP6.74□□□□□ -1.33
CAPN3-214ENST00000565274 KDM6BO15054 1643 aa6.74□□□□□ -1.33
CAPN3-214ENST00000565274 CARMIL2Q6F5E8 1435 aa6.74□□□□□ -1.33
CAPN3-214ENST00000565274 RAB15P59190 212 aa6.73□□□□□ -1.33
CAPN3-214ENST00000565274 VWA5B2Q8N398 1253 aa6.73□□□□□ -1.33
CAPN3-214ENST00000565274 TMEM151AQ8N4L1 468 aa6.73□□□□□ -1.33
CAPN3-214ENST00000565274 GPKOWQ92917 476 aaPredicted RBP eCLIP6.73□□□□□ -1.33
CAPN3-214ENST00000565274 SGSM3Q96HU1 749 aa6.73□□□□□ -1.33
CAPN3-214ENST00000565274 ADAMTS8Q9UP79 889 aa6.73□□□□□ -1.33
CAPN3-214ENST00000565274 RIPOR2Q9Y4F9 1068 aa6.73□□□□□ -1.33
CAPN3-214ENST00000565274 KIAA1107Q9UPP5 1409 aa6.73□□□□□ -1.33
CAPN3-214ENST00000565274 POLR1AO95602 1720 aaPredicted RBP6.73□□□□□ -1.33
CAPN3-214ENST00000565274 ANKRD30AQ9BXX3 1397 aa6.72□□□□□ -1.33
CAPN3-214ENST00000565274 KDM5DQ9BY66 1539 aa6.72□□□□□ -1.33
CAPN3-214ENST00000565274 SPINT1O43278 529 aa6.72□□□□□ -1.33
CAPN3-214ENST00000565274 GDF11O95390 407 aa6.72□□□□□ -1.33
CAPN3-214ENST00000565274 CTSOP43234 321 aaPredicted RBP6.72□□□□□ -1.33
CAPN3-214ENST00000565274 SUZ12Q15022 739 aaKnown RBP6.72□□□□□ -1.33
CAPN3-214ENST00000565274 NR6A1Q15406 480 aa6.72□□□□□ -1.33
CAPN3-214ENST00000565274 RNFT1Q5M7Z0 435 aa6.72□□□□□ -1.33
CAPN3-214ENST00000565274 AEBP1Q8IUX7 1158 aa6.72□□□□□ -1.33
CAPN3-214ENST00000565274 INSM2Q96T92 566 aaPredicted RBP6.72□□□□□ -1.33
CAPN3-214ENST00000565274 PRKRIP1Q9H875 184 aaPredicted RBP6.72□□□□□ -1.33
CAPN3-214ENST00000565274 ZNF395Q9H8N7 513 aaPredicted RBP6.72□□□□□ -1.33
CAPN3-214ENST00000565274 CHIC2Q9UKJ5 165 aa6.72□□□□□ -1.33
CAPN3-214ENST00000565274 LAS1LQ9Y4W2 734 aaKnown RBP6.72□□□□□ -1.33
CAPN3-214ENST00000565274 PTPRGP23470 1445 aa6.72□□□□□ -1.33
CAPN3-214ENST00000565274 ABCC10Q5T3U5 1492 aa6.72□□□□□ -1.33
CAPN3-214ENST00000565274 ABCA8O94911 1581 aa6.71□□□□□ -1.34
CAPN3-214ENST00000565274 GSK3AP49840 483 aa6.71□□□□□ -1.34
CAPN3-214ENST00000565274 MMP14P50281 582 aa6.71□□□□□ -1.34
CAPN3-214ENST00000565274 RASSF7Q02833 373 aa6.71□□□□□ -1.34
CAPN3-214ENST00000565274 NBPF8Q3BBV2 869 aa6.71□□□□□ -1.34
CAPN3-214ENST00000565274 PDXDC2PQ6P474 469 aa6.71□□□□□ -1.34
CAPN3-214ENST00000565274 Q6ZVU0 165 aa6.71□□□□□ -1.34
CAPN3-214ENST00000565274 SVOPQ8N4V2 548 aa6.71□□□□□ -1.34
CAPN3-214ENST00000565274 POLMQ9NP87 494 aaPredicted RBP6.71□□□□□ -1.34
CAPN3-214ENST00000565274 FKBPLQ9UIM3 349 aa6.71□□□□□ -1.34
CAPN3-214ENST00000565274 CAMSAP2Q08AD1 1489 aa6.71□□□□□ -1.34
CAPN3-214ENST00000565274 ITSN2Q9NZM3 1697 aa6.71□□□□□ -1.34
CAPN3-214ENST00000565274 ARHGEF12Q9NZN5 1544 aa6.71□□□□□ -1.34
CAPN3-214ENST00000565274 EIF4G3O43432 1585 aaKnown RBP6.7□□□□□ -1.34
CAPN3-214ENST00000565274 PRG4Q92954 1404 aaPredicted RBP6.7□□□□□ -1.34
CAPN3-214ENST00000565274 CLGNO14967 610 aa6.7□□□□□ -1.34
CAPN3-214ENST00000565274 CANXP27824 592 aaKnown RBP6.7□□□□□ -1.34
CAPN3-214ENST00000565274 INTS6LQ5JSJ4 861 aaKnown RBP6.7□□□□□ -1.34
CAPN3-214ENST00000565274 WHAMMQ8TF30 809 aa6.7□□□□□ -1.34
CAPN3-214ENST00000565274 HIRIP3Q9BW71 556 aaPredicted RBP6.7□□□□□ -1.34
CAPN3-214ENST00000565274 GZF1Q9H116 711 aaPredicted RBP6.7□□□□□ -1.34
CAPN3-214ENST00000565274 PPP4R2Q9NY27 417 aa6.7□□□□□ -1.34
CAPN3-214ENST00000565274 CFDP1Q9UEE9 299 aaPredicted RBP6.7□□□□□ -1.34
CAPN3-214ENST00000565274 ZBED9Q6R2W3 1325 aa6.7□□□□□ -1.34
CAPN3-214ENST00000565274 ROCK2O75116 1388 aaKnown RBP6.69□□□□□ -1.34
CAPN3-214ENST00000565274 KTN1Q86UP2 1357 aaKnown RBP6.69□□□□□ -1.34
CAPN3-214ENST00000565274 CEP170Q5SW79 1584 aa6.69□□□□□ -1.34
CAPN3-214ENST00000565274 ADGBQ8N7X0 1667 aa6.69□□□□□ -1.34
CAPN3-214ENST00000565274 LOC100996750A0A140TA64 210 aa6.69□□□□□ -1.34
CAPN3-214ENST00000565274 SLC35F4A4IF30 521 aa6.69□□□□□ -1.34
CAPN3-214ENST00000565274 ITGA6P23229 1130 aa6.69□□□□□ -1.34
CAPN3-214ENST00000565274 HNRNPUQ00839 825 aaKnown RBP eCLIP6.69□□□□□ -1.34
CAPN3-214ENST00000565274 DHX9Q08211 1270 aaKnown RBP6.69□□□□□ -1.34
CAPN3-214ENST00000565274 ZNF385CQ66K41 422 aaPredicted RBP6.69□□□□□ -1.34
CAPN3-214ENST00000565274 SV2AQ7L0J3 742 aa6.69□□□□□ -1.34
CAPN3-214ENST00000565274 ZNF622Q969S3 477 aaKnown RBP eCLIP6.69□□□□□ -1.34
CAPN3-214ENST00000565274 KRTAP4-6Q9BYQ5 205 aa6.69□□□□□ -1.34
CAPN3-214ENST00000565274 TMPRSS4Q9NRS4 437 aa6.69□□□□□ -1.34
CAPN3-214ENST00000565274 ZNF644Q9H582 1327 aaPredicted RBP6.69□□□□□ -1.34
CAPN3-214ENST00000565274 ARHGEF5Q12774 1597 aa6.69□□□□□ -1.34
CAPN3-214ENST00000565274 ANKRD50Q9ULJ7 1429 aa6.68□□□□□ -1.34
CAPN3-214ENST00000565274 ATP10BO94823 1461 aa6.68□□□□□ -1.34
CAPN3-214ENST00000565274 BRD1O95696 1058 aa6.68□□□□□ -1.34
CAPN3-214ENST00000565274 FBXO31Q5XUX0 539 aaPredicted RBP6.68□□□□□ -1.34
CAPN3-214ENST00000565274 PROCA1Q8NCQ7 364 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms