RNA–Protein interactions for RNA: ENST00000563741.5

SPSB3-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 5

Gene SPSB3, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-204ENST00000563741 SLC15A2Q16348 729 aa24.76■■□□□ 1.55
SPSB3-204ENST00000563741 TTC5Q8N0Z6 440 aa24.76■■□□□ 1.55
SPSB3-204ENST00000563741 CANXP27824 592 aaKnown RBP24.75■■□□□ 1.55
SPSB3-204ENST00000563741 ZNF496Q96IT1 587 aaPredicted RBP24.75■■□□□ 1.55
SPSB3-204ENST00000563741 PALLDQ8WX93 1383 aa24.75■■□□□ 1.55
SPSB3-204ENST00000563741 GIGYF1O75420 1035 aaPredicted RBP24.75■■□□□ 1.55
SPSB3-204ENST00000563741 CCNL1Q9UK58 526 aaPredicted RBP24.75■■□□□ 1.55
SPSB3-204ENST00000563741 KCPQ6ZWJ8 1503 aa24.74■■□□□ 1.55
SPSB3-204ENST00000563741 KCNQ4P56696 695 aa24.73■■□□□ 1.55
SPSB3-204ENST00000563741 NOB1Q9ULX3 412 aaKnown RBP24.73■■□□□ 1.55
SPSB3-204ENST00000563741 UBR2Q8IWV8 1755 aa24.73■■□□□ 1.55
SPSB3-204ENST00000563741 HDGFL1Q5TGJ6 251 aa24.72■■□□□ 1.55
SPSB3-204ENST00000563741 ZKSCAN2Q63HK3 967 aa24.72■■□□□ 1.55
SPSB3-204ENST00000563741 LRP5O75197 1615 aa24.72■■□□□ 1.55
SPSB3-204ENST00000563741 CCDC30Q5VVM6 783 aa24.72■■□□□ 1.55
SPSB3-204ENST00000563741 FMNL2Q96PY5 1086 aa24.72■■□□□ 1.55
SPSB3-204ENST00000563741 PRAMEF22A3QJZ6 481 aa24.71■■□□□ 1.55
SPSB3-204ENST00000563741 HMGB2P26583 209 aaKnown RBP24.71■■□□□ 1.55
SPSB3-204ENST00000563741 TNNQ9UQP3 1299 aa24.71■■□□□ 1.55
SPSB3-204ENST00000563741 TRIM27P14373 513 aa24.7■■□□□ 1.54
SPSB3-204ENST00000563741 PDE3AQ14432 1141 aa24.7■■□□□ 1.54
SPSB3-204ENST00000563741 NECTIN2Q92692 538 aa24.7■■□□□ 1.54
SPSB3-204ENST00000563741 ZNF827Q17R98 1081 aa24.69■■□□□ 1.54
SPSB3-204ENST00000563741 ATF7IPQ6VMQ6 1270 aa24.69■■□□□ 1.54
SPSB3-204ENST00000563741 ASAP1Q9ULH1 1129 aa24.69■■□□□ 1.54
SPSB3-204ENST00000563741 C5P01031 1676 aa24.69■■□□□ 1.54
SPSB3-204ENST00000563741 CASZ1Q86V15 1759 aa24.69■■□□□ 1.54
SPSB3-204ENST00000563741 ERICH6BQ5W0A0 696 aa24.69■■□□□ 1.54
SPSB3-204ENST00000563741 AKT1S1Q96B36 256 aa24.69■■□□□ 1.54
SPSB3-204ENST00000563741 STK31Q9BXU1 1019 aa24.69■■□□□ 1.54
SPSB3-204ENST00000563741 ATG3Q9NT62 314 aa24.69■■□□□ 1.54
SPSB3-204ENST00000563741 IPO8O15397 1037 aaKnown RBP24.68■■□□□ 1.54
SPSB3-204ENST00000563741 SLC4A2P04920 1241 aa24.68■■□□□ 1.54
SPSB3-204ENST00000563741 EIF2S2P20042 333 aaKnown RBP24.68■■□□□ 1.54
SPSB3-204ENST00000563741 TAF1LQ8IZX4 1826 aa24.68■■□□□ 1.54
SPSB3-204ENST00000563741 SNRPA1P09661 255 aaKnown RBP24.67■■□□□ 1.54
SPSB3-204ENST00000563741 RLBP1P12271 317 aa24.67■■□□□ 1.54
SPSB3-204ENST00000563741 PANK1Q8TE04 598 aa24.67■■□□□ 1.54
SPSB3-204ENST00000563741 CRBNQ96SW2 442 aa24.67■■□□□ 1.54
SPSB3-204ENST00000563741 ARHGAP45Q92619 1136 aa24.66■■□□□ 1.54
SPSB3-204ENST00000563741 CLUAP1Q96AJ1 413 aa24.66■■□□□ 1.54
SPSB3-204ENST00000563741 CHMP4AQ9BY43 222 aa24.66■■□□□ 1.54
SPSB3-204ENST00000563741 QSER1Q2KHR3 1735 aa24.66■■□□□ 1.54
SPSB3-204ENST00000563741 EXOC6Q8TAG9 804 aa24.66■■□□□ 1.54
SPSB3-204ENST00000563741 LOC102724428A0A0B4J2F2 783 aa24.65■■□□□ 1.54
SPSB3-204ENST00000563741 PTCD1O75127 700 aaKnown RBP24.65■■□□□ 1.54
SPSB3-204ENST00000563741 SIK1P57059 783 aa24.65■■□□□ 1.54
SPSB3-204ENST00000563741 PDGFDQ9GZP0 370 aaPredicted RBP24.65■■□□□ 1.54
SPSB3-204ENST00000563741 DZIP1LQ8IYY4 767 aaKnown RBP24.64■■□□□ 1.54
SPSB3-204ENST00000563741 CHPF2Q9P2E5 772 aa24.64■■□□□ 1.54
SPSB3-204ENST00000563741 G2E3Q7L622 706 aa24.64■■□□□ 1.53
SPSB3-204ENST00000563741 FTSJ3Q8IY81 847 aaKnown RBP24.64■■□□□ 1.53
SPSB3-204ENST00000563741 TFCP2L1Q9NZI6 479 aa24.64■■□□□ 1.53
SPSB3-204ENST00000563741 SPON1Q9HCB6 807 aa24.63■■□□□ 1.53
SPSB3-204ENST00000563741 TUBGCP6Q96RT7 1819 aa24.63■■□□□ 1.53
SPSB3-204ENST00000563741 LAMB4A4D0S4 1761 aa24.62■■□□□ 1.53
SPSB3-204ENST00000563741 PTPRCP08575 1304 aa24.62■■□□□ 1.53
SPSB3-204ENST00000563741 MS4A1P11836 297 aa24.61■■□□□ 1.53
SPSB3-204ENST00000563741 DBF4Q9UBU7 674 aaPredicted RBP24.61■■□□□ 1.53
SPSB3-204ENST00000563741 USP16Q9Y5T5 823 aa24.61■■□□□ 1.53
SPSB3-204ENST00000563741 FLIIQ13045 1269 aa24.61■■□□□ 1.53
SPSB3-204ENST00000563741 API5Q9BZZ5 524 aaKnown RBP24.61■■□□□ 1.53
SPSB3-204ENST00000563741 COG6Q9Y2V7 657 aa24.61■■□□□ 1.53
SPSB3-204ENST00000563741 ABCC4O15439 1325 aa24.6■■□□□ 1.53
SPSB3-204ENST00000563741 C4BP0C0L5 1744 aa24.6■■□□□ 1.53
SPSB3-204ENST00000563741 ATP6V1AP38606 617 aa24.6■■□□□ 1.53
SPSB3-204ENST00000563741 ZNF831Q5JPB2 1677 aa24.6■■□□□ 1.53
SPSB3-204ENST00000563741 CACNA1FO60840 1977 aa24.59■■□□□ 1.53
SPSB3-204ENST00000563741 PROSER3Q2NL68 480 aa24.59■■□□□ 1.53
SPSB3-204ENST00000563741 RBM42Q9BTD8 480 aaKnown RBP24.59■■□□□ 1.53
SPSB3-204ENST00000563741 ZBTB7AO95365 584 aa24.58■■□□□ 1.53
SPSB3-204ENST00000563741 ANXA1P04083 346 aa24.58■■□□□ 1.53
SPSB3-204ENST00000563741 PDIA6Q15084 440 aa24.58■■□□□ 1.53
SPSB3-204ENST00000563741 VSIG10Q8N0Z9 540 aa24.58■■□□□ 1.53
SPSB3-204ENST00000563741 PNPLA7Q6ZV29 1317 aa24.58■■□□□ 1.53
SPSB3-204ENST00000563741 PHAXQ9H814 394 aaKnown RBP24.58■■□□□ 1.52
SPSB3-204ENST00000563741 ITPK1Q13572 414 aa24.57■■□□□ 1.52
SPSB3-204ENST00000563741 MVPQ14764 893 aaKnown RBP24.57■■□□□ 1.52
SPSB3-204ENST00000563741 TMEM57Q8N5G2 664 aa24.57■■□□□ 1.52
SPSB3-204ENST00000563741 SLC4A9Q96Q91 983 aa24.57■■□□□ 1.52
SPSB3-204ENST00000563741 DDX21Q9NR30 783 aaKnown RBP eCLIP24.57■■□□□ 1.52
SPSB3-204ENST00000563741 LINC00116Q8NCU8 138 aa24.56■■□□□ 1.52
SPSB3-204ENST00000563741 MTFR1LQ9H019 292 aa24.56■■□□□ 1.52
SPSB3-204ENST00000563741 SLC16A10Q8TF71 515 aa24.55■■□□□ 1.52
SPSB3-204ENST00000563741 AK7Q96M32 723 aa24.55■■□□□ 1.52
SPSB3-204ENST00000563741 PPP4R2Q9NY27 417 aa24.55■■□□□ 1.52
SPSB3-204ENST00000563741 FKBP5Q13451 457 aaPredicted RBP24.55■■□□□ 1.52
SPSB3-204ENST00000563741 ATF5Q9Y2D1 282 aaPredicted RBP24.55■■□□□ 1.52
SPSB3-204ENST00000563741 HYPKQ9NX55 129 aa24.54■■□□□ 1.52
SPSB3-204ENST00000563741 ERBB4Q15303 1308 aa24.54■■□□□ 1.52
SPSB3-204ENST00000563741 LRP10Q7Z4F1 713 aa24.53■■□□□ 1.52
SPSB3-204ENST00000563741 ITPRIPQ8IWB1 547 aa24.53■■□□□ 1.52
SPSB3-204ENST00000563741 DNAJC10Q8IXB1 793 aa24.53■■□□□ 1.52
SPSB3-204ENST00000563741 FLAD1Q8NFF5 587 aa24.53■■□□□ 1.52
SPSB3-204ENST00000563741 SRCAPQ6ZRS2 3230 aa24.53■■□□□ 1.52
SPSB3-204ENST00000563741 UBR3Q6ZT12 1888 aa24.53■■□□□ 1.52
SPSB3-204ENST00000563741 TJP1Q07157 1748 aa24.52■■□□□ 1.52
SPSB3-204ENST00000563741 F6X3S4 739 aa24.52■■□□□ 1.52
SPSB3-204ENST00000563741 COL23A1Q86Y22 540 aaPredicted RBP24.52■■□□□ 1.52
SPSB3-204ENST00000563741 TEX13AQ9BXU3 409 aaPredicted RBP24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms