RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 CYP19A1P11511 503 aaPredicted RBP24.32■■□□□ 1.48
RAB40C-207ENST00000563109 DUSP27Q5VZP5 1158 aa24.32■■□□□ 1.48
RAB40C-207ENST00000563109 CRKLP46109 303 aaKnown RBP24.31■■□□□ 1.48
RAB40C-207ENST00000563109 TUBGCP6Q96RT7 1819 aa24.31■■□□□ 1.48
RAB40C-207ENST00000563109 EXOSC9Q06265 439 aaKnown RBP24.3■■□□□ 1.48
RAB40C-207ENST00000563109 CHMP4AQ9BY43 222 aa24.3■■□□□ 1.48
RAB40C-207ENST00000563109 CCDC87Q9NVE4 849 aa24.3■■□□□ 1.48
RAB40C-207ENST00000563109 USP16Q9Y5T5 823 aa24.3■■□□□ 1.48
RAB40C-207ENST00000563109 UBR3Q6ZT12 1888 aa24.3■■□□□ 1.48
RAB40C-207ENST00000563109 QSER1Q2KHR3 1735 aa24.3■■□□□ 1.48
RAB40C-207ENST00000563109 ELL2O00472 640 aaPredicted RBP24.29■■□□□ 1.48
RAB40C-207ENST00000563109 TWISTNBQ3B726 338 aaPredicted RBP24.29■■□□□ 1.48
RAB40C-207ENST00000563109 RC3H1Q5TC82 1133 aaKnown RBP24.29■■□□□ 1.48
RAB40C-207ENST00000563109 C8orf58Q8NAV2 365 aa24.29■■□□□ 1.48
RAB40C-207ENST00000563109 MYH14Q7Z406 1995 aaKnown RBP24.29■■□□□ 1.48
RAB40C-207ENST00000563109 GNPATO15228 680 aa24.28■■□□□ 1.48
RAB40C-207ENST00000563109 EIF2S2P20042 333 aaKnown RBP24.28■■□□□ 1.48
RAB40C-207ENST00000563109 HDGFL1Q5TGJ6 251 aa24.28■■□□□ 1.48
RAB40C-207ENST00000563109 TRMT2AQ8IZ69 625 aaKnown RBP24.28■■□□□ 1.48
RAB40C-207ENST00000563109 ANO8Q9HCE9 1232 aaPredicted RBP24.28■■□□□ 1.48
RAB40C-207ENST00000563109 ZNF827Q17R98 1081 aa24.27■■□□□ 1.48
RAB40C-207ENST00000563109 AKT1S1Q96B36 256 aa24.27■■□□□ 1.48
RAB40C-207ENST00000563109 ERBB4Q15303 1308 aa24.27■■□□□ 1.48
RAB40C-207ENST00000563109 SLC15A2Q16348 729 aa24.26■■□□□ 1.47
RAB40C-207ENST00000563109 TSPYL6Q8N831 410 aa24.26■■□□□ 1.47
RAB40C-207ENST00000563109 TFCP2L1Q9NZI6 479 aa24.26■■□□□ 1.47
RAB40C-207ENST00000563109 INTS5Q6P9B9 1019 aaKnown RBP24.25■■□□□ 1.47
RAB40C-207ENST00000563109 ZBTB1Q9Y2K1 713 aa24.25■■□□□ 1.47
RAB40C-207ENST00000563109 RTCBQ9Y3I0 505 aaKnown RBP24.25■■□□□ 1.47
RAB40C-207ENST00000563109 A1BGP04217 495 aa24.24■■□□□ 1.47
RAB40C-207ENST00000563109 CANXP27824 592 aaKnown RBP24.24■■□□□ 1.47
RAB40C-207ENST00000563109 NPM2Q86SE8 214 aaKnown RBP24.24■■□□□ 1.47
RAB40C-207ENST00000563109 NECTIN2Q92692 538 aa24.24■■□□□ 1.47
RAB40C-207ENST00000563109 RPS6KA4O75676 772 aa24.23■■□□□ 1.47
RAB40C-207ENST00000563109 CCDC30Q5VVM6 783 aa24.23■■□□□ 1.47
RAB40C-207ENST00000563109 SSFA2P28290 1259 aa24.22■■□□□ 1.47
RAB40C-207ENST00000563109 C4AP0C0L4 1744 aa24.21■■□□□ 1.47
RAB40C-207ENST00000563109 PHF14O94880 888 aa24.21■■□□□ 1.47
RAB40C-207ENST00000563109 FLAD1Q8NFF5 587 aa24.21■■□□□ 1.47
RAB40C-207ENST00000563109 STK31Q9BXU1 1019 aa24.21■■□□□ 1.47
RAB40C-207ENST00000563109 ZNF330Q9Y3S2 320 aaPredicted RBP24.21■■□□□ 1.47
RAB40C-207ENST00000563109 COL15A1P39059 1388 aa24.2■■□□□ 1.46
RAB40C-207ENST00000563109 VAMP4O75379 141 aa24.2■■□□□ 1.46
RAB40C-207ENST00000563109 CT47B1P0C2W7 299 aaPredicted RBP24.2■■□□□ 1.46
RAB40C-207ENST00000563109 ADRA2BP18089 450 aa24.2■■□□□ 1.46
RAB40C-207ENST00000563109 IL6STP40189 918 aaPredicted RBP24.2■■□□□ 1.46
RAB40C-207ENST00000563109 DBF4Q9UBU7 674 aaPredicted RBP24.2■■□□□ 1.46
RAB40C-207ENST00000563109 MYL6BP14649 208 aa24.19■■□□□ 1.46
RAB40C-207ENST00000563109 PIP4K2AP48426 406 aaPredicted RBP24.19■■□□□ 1.46
RAB40C-207ENST00000563109 CHPF2Q9P2E5 772 aa24.19■■□□□ 1.46
RAB40C-207ENST00000563109 CACNA1FO60840 1977 aa24.18■■□□□ 1.46
RAB40C-207ENST00000563109 A0A087WZG4 1122 aa24.18■■□□□ 1.46
RAB40C-207ENST00000563109 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.18■■□□□ 1.46
RAB40C-207ENST00000563109 NBPF26B4DH59 902 aa24.18■■□□□ 1.46
RAB40C-207ENST00000563109 TRAPPC3LQ5T215 181 aa24.18■■□□□ 1.46
RAB40C-207ENST00000563109 NBPF10Q6P3W6 841 aaKnown RBP24.18■■□□□ 1.46
RAB40C-207ENST00000563109 NBPF15Q8N660 670 aa24.18■■□□□ 1.46
RAB40C-207ENST00000563109 DDX21Q9NR30 783 aaKnown RBP eCLIP24.18■■□□□ 1.46
RAB40C-207ENST00000563109 PNPLA7Q6ZV29 1317 aa24.17■■□□□ 1.46
RAB40C-207ENST00000563109 MSH5O43196 834 aa24.17■■□□□ 1.46
RAB40C-207ENST00000563109 R3HDM1Q15032 1099 aaKnown RBP24.17■■□□□ 1.46
RAB40C-207ENST00000563109 ZNF428Q96B54 188 aa24.17■■□□□ 1.46
RAB40C-207ENST00000563109 EIF5P55010 431 aaKnown RBP24.16■■□□□ 1.46
RAB40C-207ENST00000563109 RFC4P35249 363 aa24.15■■□□□ 1.46
RAB40C-207ENST00000563109 HYPKQ9NX55 129 aa24.15■■□□□ 1.46
RAB40C-207ENST00000563109 CASZ1Q86V15 1759 aa24.15■■□□□ 1.46
RAB40C-207ENST00000563109 SCN7AQ01118 1682 aa24.15■■□□□ 1.46
RAB40C-207ENST00000563109 BCORQ6W2J9 1755 aa24.14■■□□□ 1.46
RAB40C-207ENST00000563109 ANXA1P04083 346 aa24.14■■□□□ 1.45
RAB40C-207ENST00000563109 PDIA6Q15084 440 aa24.14■■□□□ 1.45
RAB40C-207ENST00000563109 PROSER3Q2NL68 480 aa24.14■■□□□ 1.45
RAB40C-207ENST00000563109 AMIGO3Q86WK7 504 aa24.14■■□□□ 1.45
RAB40C-207ENST00000563109 ARXQ96QS3 562 aa24.14■■□□□ 1.45
RAB40C-207ENST00000563109 PSDA5PKW4 1024 aaPredicted RBP24.13■■□□□ 1.45
RAB40C-207ENST00000563109 TCERG1O14776 1098 aaKnown RBP24.13■■□□□ 1.45
RAB40C-207ENST00000563109 SMIM5Q71RC9 77 aa24.13■■□□□ 1.45
RAB40C-207ENST00000563109 ARHGEF1Q92888 912 aaKnown RBP24.13■■□□□ 1.45
RAB40C-207ENST00000563109 KIF6Q6ZMV9 814 aa24.12■■□□□ 1.45
RAB40C-207ENST00000563109 DZIP3Q86Y13 1208 aaKnown RBP24.12■■□□□ 1.45
RAB40C-207ENST00000563109 COL23A1Q86Y22 540 aaPredicted RBP24.12■■□□□ 1.45
RAB40C-207ENST00000563109 ZPR1O75312 459 aa24.11■■□□□ 1.45
RAB40C-207ENST00000563109 SLC4A2P04920 1241 aa24.1■■□□□ 1.45
RAB40C-207ENST00000563109 ALDH1L2Q3SY69 923 aa24.1■■□□□ 1.45
RAB40C-207ENST00000563109 USP42Q9H9J4 1324 aaKnown RBP24.1■■□□□ 1.45
RAB40C-207ENST00000563109 LRP10Q7Z4F1 713 aa24.09■■□□□ 1.45
RAB40C-207ENST00000563109 XAGE3Q8WTP9 111 aa24.09■■□□□ 1.45
RAB40C-207ENST00000563109 SMC4Q9NTJ3 1288 aa24.09■■□□□ 1.45
RAB40C-207ENST00000563109 NARFQ9UHQ1 456 aa24.09■■□□□ 1.45
RAB40C-207ENST00000563109 AIMP1Q12904 312 aaKnown RBP24.08■■□□□ 1.45
RAB40C-207ENST00000563109 COPS6Q7L5N1 327 aa24.08■■□□□ 1.45
RAB40C-207ENST00000563109 TBC1D2BQ9UPU7 963 aa24.08■■□□□ 1.45
RAB40C-207ENST00000563109 SLC16A10Q8TF71 515 aa24.07■■□□□ 1.44
RAB40C-207ENST00000563109 SSH1Q8WYL5 1049 aa24.07■■□□□ 1.44
RAB40C-207ENST00000563109 DDX58O95786 925 aaKnown RBP24.06■■□□□ 1.44
RAB40C-207ENST00000563109 USPL1Q5W0Q7 1092 aa24.06■■□□□ 1.44
RAB40C-207ENST00000563109 TTLL7Q6ZT98 887 aa24.06■■□□□ 1.44
RAB40C-207ENST00000563109 BCL2L13Q9BXK5 485 aa24.06■■□□□ 1.44
RAB40C-207ENST00000563109 PHAXQ9H814 394 aaKnown RBP24.06■■□□□ 1.44
RAB40C-207ENST00000563109 SRP68Q9UHB9 627 aaKnown RBP24.06■■□□□ 1.44
RAB40C-207ENST00000563109 ZNF652Q9Y2D9 606 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms