RNA–Protein interactions for RNA: ENST00000562890.1

SCAPER-204, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 3

Gene SCAPER, Length 671 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-204ENST00000562890 POLD1P28340 1107 aa8.93□□□□□ -0.98
SCAPER-204ENST00000562890 RTF1Q92541 710 aaKnown RBP8.93□□□□□ -0.98
SCAPER-204ENST00000562890 TAF7Q15545 349 aaPredicted RBP8.92□□□□□ -0.98
SCAPER-204ENST00000562890 NFE2L2Q16236 605 aa8.92□□□□□ -0.98
SCAPER-204ENST00000562890 MSL1Q68DK7 614 aa8.92□□□□□ -0.98
SCAPER-204ENST00000562890 ZNF496Q96IT1 587 aaPredicted RBP8.92□□□□□ -0.98
SCAPER-204ENST00000562890 TEX13AQ9BXU3 409 aaPredicted RBP8.92□□□□□ -0.98
SCAPER-204ENST00000562890 ADAMTS8Q9UP79 889 aa8.92□□□□□ -0.98
SCAPER-204ENST00000562890 SRCAPQ6ZRS2 3230 aa8.92□□□□□ -0.98
SCAPER-204ENST00000562890 HEG1Q9ULI3 1381 aa8.91□□□□□ -0.98
SCAPER-204ENST00000562890 NEFMP07197 916 aa8.91□□□□□ -0.98
SCAPER-204ENST00000562890 GYS1P13807 737 aa8.91□□□□□ -0.98
SCAPER-204ENST00000562890 TMPOP42166 694 aaKnown RBP8.91□□□□□ -0.98
SCAPER-204ENST00000562890 TTC5Q8N0Z6 440 aa8.91□□□□□ -0.98
SCAPER-204ENST00000562890 NLGN1Q8N2Q7 840 aa8.91□□□□□ -0.98
SCAPER-204ENST00000562890 FMNL2Q96PY5 1086 aa8.91□□□□□ -0.98
SCAPER-204ENST00000562890 CCDC87Q9NVE4 849 aa8.91□□□□□ -0.98
SCAPER-204ENST00000562890 USP16Q9Y5T5 823 aa8.91□□□□□ -0.98
SCAPER-204ENST00000562890 C4AP0C0L4 1744 aa8.91□□□□□ -0.98
SCAPER-204ENST00000562890 TM4SF1P30408 202 aa8.9□□□□□ -0.98
SCAPER-204ENST00000562890 RFC4P35249 363 aa8.9□□□□□ -0.98
SCAPER-204ENST00000562890 EIF5P55010 431 aaKnown RBP8.9□□□□□ -0.98
SCAPER-204ENST00000562890 RIPK4P57078 832 aa8.9□□□□□ -0.98
SCAPER-204ENST00000562890 SOS1Q07889 1333 aaPredicted RBP8.89□□□□□ -0.99
SCAPER-204ENST00000562890 STARD3NLO95772 234 aa8.89□□□□□ -0.99
SCAPER-204ENST00000562890 CCDC184Q52MB2 194 aa8.89□□□□□ -0.99
SCAPER-204ENST00000562890 PNISRQ8TF01 805 aaKnown RBP8.89□□□□□ -0.99
SCAPER-204ENST00000562890 RUNDC1Q96C34 613 aa8.89□□□□□ -0.99
SCAPER-204ENST00000562890 MIS18AQ9NYP9 233 aa8.89□□□□□ -0.99
SCAPER-204ENST00000562890 NARFQ9UHQ1 456 aa8.89□□□□□ -0.99
SCAPER-204ENST00000562890 ZBTB1Q9Y2K1 713 aa8.89□□□□□ -0.99
SCAPER-204ENST00000562890 CD2APQ9Y5K6 639 aa8.89□□□□□ -0.99
SCAPER-204ENST00000562890 USP42Q9H9J4 1324 aaKnown RBP8.88□□□□□ -0.99
SCAPER-204ENST00000562890 MAPK8IP3Q9UPT6 1336 aa8.88□□□□□ -0.99
SCAPER-204ENST00000562890 PRAMEF22A3QJZ6 481 aa8.88□□□□□ -0.99
SCAPER-204ENST00000562890 A1BGP04217 495 aa8.88□□□□□ -0.99
SCAPER-204ENST00000562890 SNRPA1P09661 255 aaKnown RBP8.88□□□□□ -0.99
SCAPER-204ENST00000562890 CANXP27824 592 aaKnown RBP8.88□□□□□ -0.99
SCAPER-204ENST00000562890 POLA2Q14181 598 aa8.88□□□□□ -0.99
SCAPER-204ENST00000562890 FKBP8Q14318 412 aa8.88□□□□□ -0.99
SCAPER-204ENST00000562890 NLGN2Q8NFZ4 835 aa8.88□□□□□ -0.99
SCAPER-204ENST00000562890 THUMPD2Q9BTF0 503 aaKnown RBP8.88□□□□□ -0.99
SCAPER-204ENST00000562890 BCL2L12Q9HB09 334 aa8.88□□□□□ -0.99
SCAPER-204ENST00000562890 SRP68Q9UHB9 627 aaKnown RBP8.88□□□□□ -0.99
SCAPER-204ENST00000562890 TRIM35Q9UPQ4 493 aa8.88□□□□□ -0.99
SCAPER-204ENST00000562890 KIF13BQ9NQT8 1826 aa8.88□□□□□ -0.99
SCAPER-204ENST00000562890 KDM3BQ7LBC6 1761 aa8.88□□□□□ -0.99
SCAPER-204ENST00000562890 MMP10P09238 476 aa8.87□□□□□ -0.99
SCAPER-204ENST00000562890 IL6STP40189 918 aaPredicted RBP8.87□□□□□ -0.99
SCAPER-204ENST00000562890 EIF4A1P60842 406 aaKnown RBP8.87□□□□□ -0.99
SCAPER-204ENST00000562890 WDR43Q15061 677 aaKnown RBP eCLIP8.87□□□□□ -0.99
SCAPER-204ENST00000562890 USPL1Q5W0Q7 1092 aa8.87□□□□□ -0.99
SCAPER-204ENST00000562890 CCDC146Q8IYE0 955 aa8.87□□□□□ -0.99
SCAPER-204ENST00000562890 BABAM1Q9NWV8 329 aa8.87□□□□□ -0.99
SCAPER-204ENST00000562890 ZPR1O75312 459 aa8.86□□□□□ -0.99
SCAPER-204ENST00000562890 GIGYF1O75420 1035 aaPredicted RBP8.86□□□□□ -0.99
SCAPER-204ENST00000562890 AFDNP55196 1824 aaKnown RBP8.85□□□□□ -0.99
SCAPER-204ENST00000562890 A0A087WZG4 1122 aa8.85□□□□□ -0.99
SCAPER-204ENST00000562890 NBPF26B4DH59 902 aa8.85□□□□□ -0.99
SCAPER-204ENST00000562890 CHL1O00533 1208 aa8.85□□□□□ -0.99
SCAPER-204ENST00000562890 ANP32CO43423 234 aa8.85□□□□□ -0.99
SCAPER-204ENST00000562890 TGFB2P61812 414 aa8.85□□□□□ -0.99
SCAPER-204ENST00000562890 NEUROD2Q15784 382 aa8.85□□□□□ -0.99
SCAPER-204ENST00000562890 NBPF10Q6P3W6 841 aaKnown RBP8.85□□□□□ -0.99
SCAPER-204ENST00000562890 KLHL34Q8N239 644 aa8.85□□□□□ -0.99
SCAPER-204ENST00000562890 NBPF15Q8N660 670 aa8.85□□□□□ -0.99
SCAPER-204ENST00000562890 RRP7AQ9Y3A4 280 aaKnown RBP8.85□□□□□ -0.99
SCAPER-204ENST00000562890 PARP3Q9Y6F1 533 aa8.85□□□□□ -0.99
SCAPER-204ENST00000562890 CHD4Q14839 1912 aa8.85□□□□□ -0.99
SCAPER-204ENST00000562890 COL15A1P39059 1388 aa8.85□□□□□ -0.99
SCAPER-204ENST00000562890 POLRMTO00411 1230 aaKnown RBP8.84□□□□□ -0.99
SCAPER-204ENST00000562890 DDR1Q08345 913 aa8.84□□□□□ -0.99
SCAPER-204ENST00000562890 LMOD3Q0VAK6 560 aa8.84□□□□□ -0.99
SCAPER-204ENST00000562890 NFIXQ14938 502 aa8.84□□□□□ -0.99
SCAPER-204ENST00000562890 KIAA1551Q9HCM1 1747 aa8.84□□□□□ -0.99
SCAPER-204ENST00000562890 TBC1D2BQ9UPU7 963 aa8.84□□□□□ -0.99
SCAPER-204ENST00000562890 N4BP2Q86UW6 1770 aaPredicted RBP8.84□□□□□ -1
SCAPER-204ENST00000562890 NRXN2Q9P2S2 1712 aa8.83□□□□□ -1
SCAPER-204ENST00000562890 APAF1O14727 1248 aa8.83□□□□□ -1
SCAPER-204ENST00000562890 YBX3P16989 372 aaKnown RBP eCLIP8.83□□□□□ -1
SCAPER-204ENST00000562890 KCNA3P22001 575 aa8.83□□□□□ -1
SCAPER-204ENST00000562890 PIP4K2AP48426 406 aaPredicted RBP8.83□□□□□ -1
SCAPER-204ENST00000562890 GPR162Q16538 588 aa8.83□□□□□ -1
SCAPER-204ENST00000562890 TSPYL4Q9UJ04 414 aa8.83□□□□□ -1
SCAPER-204ENST00000562890 LAMB4A4D0S4 1761 aa8.82□□□□□ -1
SCAPER-204ENST00000562890 CAMTA2O94983 1202 aa8.82□□□□□ -1
SCAPER-204ENST00000562890 SERPINB2P05120 415 aa8.82□□□□□ -1
SCAPER-204ENST00000562890 ZNF853P0CG23 659 aa8.82□□□□□ -1
SCAPER-204ENST00000562890 ATXN8OSP0DMR3 200 aa8.82□□□□□ -1
SCAPER-204ENST00000562890 TBC1D9BQ66K14 1250 aa8.82□□□□□ -1
SCAPER-204ENST00000562890 CLEC4GQ6UXB4 293 aa8.82□□□□□ -1
SCAPER-204ENST00000562890 DZIP3Q86Y13 1208 aaKnown RBP8.82□□□□□ -1
SCAPER-204ENST00000562890 BRCA1P38398 1863 aaKnown RBP8.81□□□□□ -1
SCAPER-204ENST00000562890 A0A0G2JLW4 131 aa8.81□□□□□ -1
SCAPER-204ENST00000562890 RGL2O15211 777 aa8.81□□□□□ -1
SCAPER-204ENST00000562890 GRIN3BO60391 1043 aa8.81□□□□□ -1
SCAPER-204ENST00000562890 PDIA6Q15084 440 aa8.81□□□□□ -1
SCAPER-204ENST00000562890 LRP10Q7Z4F1 713 aa8.81□□□□□ -1
SCAPER-204ENST00000562890 CFAP44Q96MT7 982 aa8.81□□□□□ -1
SCAPER-204ENST00000562890 BCORQ6W2J9 1755 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms