RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 SSFA2P28290 1259 aa21.21■□□□□ 0.99
USB1-206ENST00000562534 TRAPPC3LQ5T215 181 aa21.21■□□□□ 0.99
USB1-206ENST00000562534 ADRA2BP18089 450 aa21.2■□□□□ 0.98
USB1-206ENST00000562534 C5P01031 1676 aa21.2■□□□□ 0.98
USB1-206ENST00000562534 KDM3BQ7LBC6 1761 aa21.2■□□□□ 0.98
USB1-206ENST00000562534 TAF1LQ8IZX4 1826 aa21.2■□□□□ 0.98
USB1-206ENST00000562534 C4BP0C0L5 1744 aa21.19■□□□□ 0.98
USB1-206ENST00000562534 E9PSI1 815 aa21.19■□□□□ 0.98
USB1-206ENST00000562534 NPM2Q86SE8 214 aaKnown RBP21.19■□□□□ 0.98
USB1-206ENST00000562534 TSR2Q969E8 191 aaKnown RBP21.19■□□□□ 0.98
USB1-206ENST00000562534 SOS1Q07889 1333 aaPredicted RBP21.19■□□□□ 0.98
USB1-206ENST00000562534 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.18■□□□□ 0.98
USB1-206ENST00000562534 A1BGP04217 495 aa21.18■□□□□ 0.98
USB1-206ENST00000562534 CANXP27824 592 aaKnown RBP21.18■□□□□ 0.98
USB1-206ENST00000562534 DUSP27Q5VZP5 1158 aa21.18■□□□□ 0.98
USB1-206ENST00000562534 SLC16A10Q8TF71 515 aa21.18■□□□□ 0.98
USB1-206ENST00000562534 CICQ96RK0 1608 aaPredicted RBP21.18■□□□□ 0.98
USB1-206ENST00000562534 MSH5O43196 834 aa21.17■□□□□ 0.98
USB1-206ENST00000562534 EIF2S2P20042 333 aaKnown RBP21.17■□□□□ 0.98
USB1-206ENST00000562534 IL6STP40189 918 aaPredicted RBP21.17■□□□□ 0.98
USB1-206ENST00000562534 COL23A1Q86Y22 540 aaPredicted RBP21.17■□□□□ 0.98
USB1-206ENST00000562534 SPINK5Q9NQ38 1064 aaPredicted RBP21.17■□□□□ 0.98
USB1-206ENST00000562534 ZBTB1Q9Y2K1 713 aa21.17■□□□□ 0.98
USB1-206ENST00000562534 PNPLA7Q6ZV29 1317 aa21.17■□□□□ 0.98
USB1-206ENST00000562534 PHF14O94880 888 aa21.16■□□□□ 0.98
USB1-206ENST00000562534 SLFN5Q08AF3 891 aa21.16■□□□□ 0.98
USB1-206ENST00000562534 KRT24Q2M2I5 525 aa21.16■□□□□ 0.98
USB1-206ENST00000562534 C8orf58Q8NAV2 365 aa21.16■□□□□ 0.98
USB1-206ENST00000562534 ARHGEF1Q92888 912 aaKnown RBP21.16■□□□□ 0.98
USB1-206ENST00000562534 TJP1Q07157 1748 aa21.15■□□□□ 0.98
USB1-206ENST00000562534 ERBB4Q15303 1308 aa21.15■□□□□ 0.98
USB1-206ENST00000562534 FANCIQ9NVI1 1328 aa21.15■□□□□ 0.98
USB1-206ENST00000562534 A0A087WZG4 1122 aa21.15■□□□□ 0.98
USB1-206ENST00000562534 ELL2O00472 640 aaPredicted RBP21.15■□□□□ 0.98
USB1-206ENST00000562534 RFC4P35249 363 aa21.15■□□□□ 0.98
USB1-206ENST00000562534 EIF5P55010 431 aaKnown RBP21.15■□□□□ 0.98
USB1-206ENST00000562534 COL5A3P25940 1745 aaPredicted RBP21.14■□□□□ 0.97
USB1-206ENST00000562534 AMIGO3Q86WK7 504 aa21.13■□□□□ 0.97
USB1-206ENST00000562534 NBPF26B4DH59 902 aa21.12■□□□□ 0.97
USB1-206ENST00000562534 EXOSC9Q06265 439 aaKnown RBP21.12■□□□□ 0.97
USB1-206ENST00000562534 TWISTNBQ3B726 338 aaPredicted RBP21.12■□□□□ 0.97
USB1-206ENST00000562534 HDGFL1Q5TGJ6 251 aa21.12■□□□□ 0.97
USB1-206ENST00000562534 NBPF10Q6P3W6 841 aaKnown RBP21.12■□□□□ 0.97
USB1-206ENST00000562534 SMIM5Q71RC9 77 aa21.12■□□□□ 0.97
USB1-206ENST00000562534 TRMT2AQ8IZ69 625 aaKnown RBP21.12■□□□□ 0.97
USB1-206ENST00000562534 NBPF15Q8N660 670 aa21.12■□□□□ 0.97
USB1-206ENST00000562534 CDCA7LQ96GN5 454 aa21.12■□□□□ 0.97
USB1-206ENST00000562534 PDGFDQ9GZP0 370 aaPredicted RBP21.12■□□□□ 0.97
USB1-206ENST00000562534 MYH14Q7Z406 1995 aaKnown RBP21.12■□□□□ 0.97
USB1-206ENST00000562534 ZPR1O75312 459 aa21.11■□□□□ 0.97
USB1-206ENST00000562534 TSPYL6Q8N831 410 aa21.11■□□□□ 0.97
USB1-206ENST00000562534 DBF4Q9UBU7 674 aaPredicted RBP21.11■□□□□ 0.97
USB1-206ENST00000562534 ZBED9Q6R2W3 1325 aa21.1■□□□□ 0.97
USB1-206ENST00000562534 CCDC30Q5VVM6 783 aa21.1■□□□□ 0.97
USB1-206ENST00000562534 NECTIN2Q92692 538 aa21.1■□□□□ 0.97
USB1-206ENST00000562534 MTFR1LQ9H019 292 aa21.1■□□□□ 0.97
USB1-206ENST00000562534 DDX21Q9NR30 783 aaKnown RBP eCLIP21.1■□□□□ 0.97
USB1-206ENST00000562534 ZNF330Q9Y3S2 320 aaPredicted RBP21.1■□□□□ 0.97
USB1-206ENST00000562534 VAMP4O75379 141 aa21.09■□□□□ 0.97
USB1-206ENST00000562534 ARXQ96QS3 562 aa21.09■□□□□ 0.97
USB1-206ENST00000562534 NARFQ9UHQ1 456 aa21.09■□□□□ 0.97
USB1-206ENST00000562534 MYL6BP14649 208 aa21.08■□□□□ 0.97
USB1-206ENST00000562534 PIP4K2AP48426 406 aaPredicted RBP21.08■□□□□ 0.97
USB1-206ENST00000562534 PDIA6Q15084 440 aa21.08■□□□□ 0.97
USB1-206ENST00000562534 NLGN1Q8N2Q7 840 aa21.08■□□□□ 0.97
USB1-206ENST00000562534 COL15A1P39059 1388 aa21.08■□□□□ 0.96
USB1-206ENST00000562534 UBR3Q6ZT12 1888 aa21.07■□□□□ 0.96
USB1-206ENST00000562534 QSER1Q2KHR3 1735 aa21.07■□□□□ 0.96
USB1-206ENST00000562534 ZBTB7AO95365 584 aa21.07■□□□□ 0.96
USB1-206ENST00000562534 SPON1Q9HCB6 807 aa21.07■□□□□ 0.96
USB1-206ENST00000562534 HYPKQ9NX55 129 aa21.07■□□□□ 0.96
USB1-206ENST00000562534 DZIP3Q86Y13 1208 aaKnown RBP21.06■□□□□ 0.96
USB1-206ENST00000562534 TBC1D2BQ9UPU7 963 aa21.06■□□□□ 0.96
USB1-206ENST00000562534 USP42Q9H9J4 1324 aaKnown RBP21.05■□□□□ 0.96
USB1-206ENST00000562534 STK31Q9BXU1 1019 aa21.05■□□□□ 0.96
USB1-206ENST00000562534 CHPF2Q9P2E5 772 aa21.05■□□□□ 0.96
USB1-206ENST00000562534 ATF5Q9Y2D1 282 aaPredicted RBP21.05■□□□□ 0.96
USB1-206ENST00000562534 RGL2O15211 777 aa21.04■□□□□ 0.96
USB1-206ENST00000562534 GYS1P13807 737 aa21.04■□□□□ 0.96
USB1-206ENST00000562534 USPL1Q5W0Q7 1092 aa21.04■□□□□ 0.96
USB1-206ENST00000562534 SRP68Q9UHB9 627 aaKnown RBP21.04■□□□□ 0.96
USB1-206ENST00000562534 CT47B1P0C2W7 299 aaPredicted RBP21.03■□□□□ 0.96
USB1-206ENST00000562534 CLEC4GQ6UXB4 293 aa21.03■□□□□ 0.96
USB1-206ENST00000562534 LRP10Q7Z4F1 713 aa21.03■□□□□ 0.96
USB1-206ENST00000562534 ZNF428Q96B54 188 aa21.03■□□□□ 0.96
USB1-206ENST00000562534 LAMB4A4D0S4 1761 aa21.02■□□□□ 0.96
USB1-206ENST00000562534 ERVV-1B6SEH8 477 aa21.02■□□□□ 0.96
USB1-206ENST00000562534 ANXA1P04083 346 aa21.02■□□□□ 0.96
USB1-206ENST00000562534 POLD1P28340 1107 aa21.02■□□□□ 0.96
USB1-206ENST00000562534 PROSER3Q2NL68 480 aa21.02■□□□□ 0.96
USB1-206ENST00000562534 KIF6Q6ZMV9 814 aa21.02■□□□□ 0.96
USB1-206ENST00000562534 COPS6Q7L5N1 327 aa21.02■□□□□ 0.96
USB1-206ENST00000562534 TUBGCP6Q96RT7 1819 aa21.01■□□□□ 0.95
USB1-206ENST00000562534 SLC4A2P04920 1241 aa21.01■□□□□ 0.95
USB1-206ENST00000562534 ZNF652Q9Y2D9 606 aa21.01■□□□□ 0.95
USB1-206ENST00000562534 CASZ1Q86V15 1759 aa21■□□□□ 0.95
USB1-206ENST00000562534 CAMTA2O94983 1202 aa21■□□□□ 0.95
USB1-206ENST00000562534 AIMP1Q12904 312 aaKnown RBP21■□□□□ 0.95
USB1-206ENST00000562534 XAGE3Q8WTP9 111 aa21■□□□□ 0.95
USB1-206ENST00000562534 FKBP8Q14318 412 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms