RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 MAP3K1Q13233 1512 aa7.01□□□□□ -1.29
CAPN3-211ENST00000562199 EPB41L2O43491 1005 aaKnown RBP7□□□□□ -1.29
CAPN3-211ENST00000562199 EIF3JO75822 258 aaKnown RBP7□□□□□ -1.29
CAPN3-211ENST00000562199 BMP2P12643 396 aa7□□□□□ -1.29
CAPN3-211ENST00000562199 SEMA3FQ13275 785 aa7□□□□□ -1.29
CAPN3-211ENST00000562199 SND1Q7KZF4 910 aaKnown RBP eCLIP7□□□□□ -1.29
CAPN3-211ENST00000562199 SH3BP5LQ7L8J4 393 aa7□□□□□ -1.29
CAPN3-211ENST00000562199 PROSER2Q86WR7 435 aaPredicted RBP7□□□□□ -1.29
CAPN3-211ENST00000562199 JADE2Q9NQC1 790 aa7□□□□□ -1.29
CAPN3-211ENST00000562199 KLHL42Q9P2K6 505 aa7□□□□□ -1.29
CAPN3-211ENST00000562199 FEZ2Q9UHY8 353 aaPredicted RBP7□□□□□ -1.29
CAPN3-211ENST00000562199 MAPKBP1O60336 1514 aa7□□□□□ -1.29
CAPN3-211ENST00000562199 ERBB4Q15303 1308 aa7□□□□□ -1.29
CAPN3-211ENST00000562199 GOLGA6CA6NDK9 693 aa6.99□□□□□ -1.29
CAPN3-211ENST00000562199 GOLGA6BA6NDN3 693 aa6.99□□□□□ -1.29
CAPN3-211ENST00000562199 H3BM21 787 aa6.99□□□□□ -1.29
CAPN3-211ENST00000562199 TCERG1O14776 1098 aaKnown RBP6.99□□□□□ -1.29
CAPN3-211ENST00000562199 MAN1A2O60476 641 aa6.99□□□□□ -1.29
CAPN3-211ENST00000562199 UPP2O95045 317 aa6.99□□□□□ -1.29
CAPN3-211ENST00000562199 GOLGA6DP0CG33 693 aa6.99□□□□□ -1.29
CAPN3-211ENST00000562199 RHBDL3P58872 404 aa6.99□□□□□ -1.29
CAPN3-211ENST00000562199 HSP90AA2PQ14568 343 aaPredicted RBP6.99□□□□□ -1.29
CAPN3-211ENST00000562199 NR6A1Q15406 480 aa6.99□□□□□ -1.29
CAPN3-211ENST00000562199 SKIV2LQ15477 1246 aaKnown RBP6.99□□□□□ -1.29
CAPN3-211ENST00000562199 CC2D1BQ5T0F9 858 aaKnown RBP6.99□□□□□ -1.29
CAPN3-211ENST00000562199 MSL3Q8N5Y2 521 aaKnown RBP6.99□□□□□ -1.29
CAPN3-211ENST00000562199 PMM1Q92871 262 aa6.99□□□□□ -1.29
CAPN3-211ENST00000562199 CCDC85AQ96PX6 553 aaPredicted RBP6.99□□□□□ -1.29
CAPN3-211ENST00000562199 C1QTNF2Q9BXJ5 285 aa6.99□□□□□ -1.29
CAPN3-211ENST00000562199 GOLGA6AQ9NYA3 693 aa6.99□□□□□ -1.29
CAPN3-211ENST00000562199 CCNB3Q8WWL7 1395 aa6.98□□□□□ -1.29
CAPN3-211ENST00000562199 CCDC194A0A1B0GVG4 234 aa6.98□□□□□ -1.29
CAPN3-211ENST00000562199 NPAS3Q8IXF0 933 aa6.98□□□□□ -1.29
CAPN3-211ENST00000562199 FNBP4Q8N3X1 1017 aaPredicted RBP6.98□□□□□ -1.29
CAPN3-211ENST00000562199 PPP1R1BQ9UD71 204 aaPredicted RBP6.98□□□□□ -1.29
CAPN3-211ENST00000562199 CENPJQ9HC77 1338 aaPredicted RBP6.98□□□□□ -1.29
CAPN3-211ENST00000562199 IGF1RP08069 1367 aa6.97□□□□□ -1.29
CAPN3-211ENST00000562199 DHX16O60231 1041 aaKnown RBP6.97□□□□□ -1.29
CAPN3-211ENST00000562199 AP1G2O75843 785 aa6.97□□□□□ -1.29
CAPN3-211ENST00000562199 SCP2P22307 547 aa6.97□□□□□ -1.29
CAPN3-211ENST00000562199 TIAM1Q13009 1591 aa6.97□□□□□ -1.29
CAPN3-211ENST00000562199 ERFEQ4G0M1 354 aa6.97□□□□□ -1.29
CAPN3-211ENST00000562199 HSP90AB3PQ58FF7 597 aa6.97□□□□□ -1.29
CAPN3-211ENST00000562199 ZKSCAN2Q63HK3 967 aa6.97□□□□□ -1.29
CAPN3-211ENST00000562199 DDX46Q7L014 1031 aaKnown RBP6.97□□□□□ -1.29
CAPN3-211ENST00000562199 CCDC116Q8IYX3 515 aa6.97□□□□□ -1.29
CAPN3-211ENST00000562199 LINC00528Q8N1L1 170 aa6.97□□□□□ -1.29
CAPN3-211ENST00000562199 VTI1AQ96AJ9 217 aa6.97□□□□□ -1.29
CAPN3-211ENST00000562199 SPOCK3Q9BQ16 436 aa6.97□□□□□ -1.29
CAPN3-211ENST00000562199 ARHGAP9Q9BRR9 750 aa6.97□□□□□ -1.29
CAPN3-211ENST00000562199 CFAP43Q8NDM7 1665 aa6.96□□□□□ -1.29
CAPN3-211ENST00000562199 HMGXB3Q12766 1538 aa6.96□□□□□ -1.29
CAPN3-211ENST00000562199 PARNO95453 639 aaKnown RBP6.96□□□□□ -1.3
CAPN3-211ENST00000562199 GET4Q7L5D6 327 aaPredicted RBP6.96□□□□□ -1.3
CAPN3-211ENST00000562199 ZBTB33Q86T24 672 aa6.96□□□□□ -1.3
CAPN3-211ENST00000562199 TRMT44Q8IYL2 757 aaKnown RBP6.96□□□□□ -1.3
CAPN3-211ENST00000562199 MEIOBQ8N635 442 aa6.96□□□□□ -1.3
CAPN3-211ENST00000562199 GPATCH3Q96I76 525 aa6.96□□□□□ -1.3
CAPN3-211ENST00000562199 ARHGEF10LQ9HCE6 1279 aa6.96□□□□□ -1.3
CAPN3-211ENST00000562199 FKBPLQ9UIM3 349 aa6.96□□□□□ -1.3
CAPN3-211ENST00000562199 FRMD4BQ9Y2L6 1034 aa6.96□□□□□ -1.3
CAPN3-211ENST00000562199 MAP4K5Q9Y4K4 846 aa6.96□□□□□ -1.3
CAPN3-211ENST00000562199 COMMD10Q9Y6G5 202 aa6.96□□□□□ -1.3
CAPN3-211ENST00000562199 ARHGAP35Q9NRY4 1499 aa6.96□□□□□ -1.3
CAPN3-211ENST00000562199 ZNF500O60304 480 aaPredicted RBP6.95□□□□□ -1.3
CAPN3-211ENST00000562199 PPP1R15AO75807 674 aaPredicted RBP6.95□□□□□ -1.3
CAPN3-211ENST00000562199 CBLBQ13191 982 aa6.95□□□□□ -1.3
CAPN3-211ENST00000562199 SH3D19Q5HYK7 790 aa6.95□□□□□ -1.3
CAPN3-211ENST00000562199 PDXDC2PQ6P474 469 aa6.95□□□□□ -1.3
CAPN3-211ENST00000562199 ZSCAN1Q8NBB4 408 aa6.95□□□□□ -1.3
CAPN3-211ENST00000562199 GPKOWQ92917 476 aaPredicted RBP eCLIP6.95□□□□□ -1.3
CAPN3-211ENST00000562199 EMILIN1Q9Y6C2 1016 aa6.95□□□□□ -1.3
CAPN3-211ENST00000562199 IVNS1ABPQ9Y6Y0 642 aa6.95□□□□□ -1.3
CAPN3-211ENST00000562199 CUX1P39880 1505 aa6.95□□□□□ -1.3
CAPN3-211ENST00000562199 RPGRIP1LQ68CZ1 1315 aa6.95□□□□□ -1.3
CAPN3-211ENST00000562199 KIF27Q86VH2 1401 aa6.94□□□□□ -1.3
CAPN3-211ENST00000562199 PRDM2Q13029 1718 aa6.94□□□□□ -1.3
CAPN3-211ENST00000562199 FIGNL2A6NMB9 653 aa6.94□□□□□ -1.3
CAPN3-211ENST00000562199 U2SURPO15042 1029 aaKnown RBP6.94□□□□□ -1.3
CAPN3-211ENST00000562199 COPB2P35606 906 aa6.94□□□□□ -1.3
CAPN3-211ENST00000562199 MTA1Q13330 715 aa6.94□□□□□ -1.3
CAPN3-211ENST00000562199 PPP1R26Q5T8A7 1209 aaPredicted RBP6.94□□□□□ -1.3
CAPN3-211ENST00000562199 ANKRD23Q86SG2 305 aa6.94□□□□□ -1.3
CAPN3-211ENST00000562199 AMOTL1Q8IY63 956 aa6.94□□□□□ -1.3
CAPN3-211ENST00000562199 EPS8L1Q8TE68 723 aa6.94□□□□□ -1.3
CAPN3-211ENST00000562199 DDRGK1Q96HY6 314 aa6.94□□□□□ -1.3
CAPN3-211ENST00000562199 KCTD15Q96SI1 283 aaPredicted RBP6.94□□□□□ -1.3
CAPN3-211ENST00000562199 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.94□□□□□ -1.3
CAPN3-211ENST00000562199 TMEM51Q9NW97 253 aa6.94□□□□□ -1.3
CAPN3-211ENST00000562199 CEP126Q9P2H0 1117 aa6.94□□□□□ -1.3
CAPN3-211ENST00000562199 BDNFP23560 247 aa6.93□□□□□ -1.3
CAPN3-211ENST00000562199 ANP32AP39687 249 aaKnown RBP6.93□□□□□ -1.3
CAPN3-211ENST00000562199 GYS2P54840 703 aa6.93□□□□□ -1.3
CAPN3-211ENST00000562199 C4orf46Q504U0 113 aa6.93□□□□□ -1.3
CAPN3-211ENST00000562199 NBPF6Q5VWK0 638 aa6.93□□□□□ -1.3
CAPN3-211ENST00000562199 NBPF10Q6P3W6 841 aaKnown RBP6.93□□□□□ -1.3
CAPN3-211ENST00000562199 NBPF5PQ86XG9 351 aaPredicted RBP6.93□□□□□ -1.3
CAPN3-211ENST00000562199 CREBRFQ8IUR6 639 aa6.93□□□□□ -1.3
CAPN3-211ENST00000562199 PNISRQ8TF01 805 aaKnown RBP6.93□□□□□ -1.3
CAPN3-211ENST00000562199 SLC10A4Q96EP9 437 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms