RNA–Protein interactions for RNA: ENST00000561642.1

AC133561.2-202, humanhuman

TSL 1 (best) BASIC

Gene AC133561.2, Length 1,301 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC133561.2-202ENST00000561642 MIS18AQ9NYP9 233 aa12.08□□□□□ -0.48
AC133561.2-202ENST00000561642 RRP7AQ9Y3A4 280 aaKnown RBP12.08□□□□□ -0.48
AC133561.2-202ENST00000561642 MAPK8IP3Q9UPT6 1336 aa12.07□□□□□ -0.48
AC133561.2-202ENST00000561642 PRAMEF22A3QJZ6 481 aa12.07□□□□□ -0.48
AC133561.2-202ENST00000561642 EIF5P55010 431 aaKnown RBP12.07□□□□□ -0.48
AC133561.2-202ENST00000561642 FMNL2Q96PY5 1086 aa12.07□□□□□ -0.48
AC133561.2-202ENST00000561642 MRS2Q9HD23 443 aa12.07□□□□□ -0.48
AC133561.2-202ENST00000561642 ATF5Q9Y2D1 282 aaPredicted RBP12.07□□□□□ -0.48
AC133561.2-202ENST00000561642 USP16Q9Y5T5 823 aa12.07□□□□□ -0.48
AC133561.2-202ENST00000561642 GNPATO15228 680 aa12.06□□□□□ -0.48
AC133561.2-202ENST00000561642 GIGYF1O75420 1035 aaPredicted RBP12.06□□□□□ -0.48
AC133561.2-202ENST00000561642 CCDC27Q2M243 656 aa12.06□□□□□ -0.48
AC133561.2-202ENST00000561642 AK7Q96M32 723 aa12.06□□□□□ -0.48
AC133561.2-202ENST00000561642 TEX13AQ9BXU3 409 aaPredicted RBP12.06□□□□□ -0.48
AC133561.2-202ENST00000561642 CCDC87Q9NVE4 849 aa12.06□□□□□ -0.48
AC133561.2-202ENST00000561642 SOS1Q07889 1333 aaPredicted RBP12.06□□□□□ -0.48
AC133561.2-202ENST00000561642 NEFMP07197 916 aa12.05□□□□□ -0.48
AC133561.2-202ENST00000561642 ZBTB1Q9Y2K1 713 aa12.05□□□□□ -0.48
AC133561.2-202ENST00000561642 RTCBQ9Y3I0 505 aaKnown RBP12.05□□□□□ -0.48
AC133561.2-202ENST00000561642 NBPF26B4DH59 902 aa12.04□□□□□ -0.48
AC133561.2-202ENST00000561642 SNRPA1P09661 255 aaKnown RBP12.04□□□□□ -0.48
AC133561.2-202ENST00000561642 GYS1P13807 737 aa12.04□□□□□ -0.48
AC133561.2-202ENST00000561642 LMOD3Q0VAK6 560 aa12.04□□□□□ -0.48
AC133561.2-202ENST00000561642 TRAPPC3LQ5T215 181 aa12.04□□□□□ -0.48
AC133561.2-202ENST00000561642 NBPF10Q6P3W6 841 aaKnown RBP12.04□□□□□ -0.48
AC133561.2-202ENST00000561642 LRP10Q7Z4F1 713 aa12.04□□□□□ -0.48
AC133561.2-202ENST00000561642 TTC5Q8N0Z6 440 aa12.04□□□□□ -0.48
AC133561.2-202ENST00000561642 NBPF15Q8N660 670 aa12.04□□□□□ -0.48
AC133561.2-202ENST00000561642 BCL2L12Q9HB09 334 aa12.04□□□□□ -0.48
AC133561.2-202ENST00000561642 KDM3BQ7LBC6 1761 aa12.03□□□□□ -0.48
AC133561.2-202ENST00000561642 GOLGB1Q14789 3259 aaKnown RBP12.03□□□□□ -0.48
AC133561.2-202ENST00000561642 CCER2I3L3R5 266 aa12.03□□□□□ -0.48
AC133561.2-202ENST00000561642 STARD3NLO95772 234 aa12.03□□□□□ -0.48
AC133561.2-202ENST00000561642 A1BGP04217 495 aa12.03□□□□□ -0.48
AC133561.2-202ENST00000561642 TM4SF1P30408 202 aa12.03□□□□□ -0.48
AC133561.2-202ENST00000561642 CFAP44Q96MT7 982 aa12.03□□□□□ -0.48
AC133561.2-202ENST00000561642 USP42Q9H9J4 1324 aaKnown RBP12.02□□□□□ -0.49
AC133561.2-202ENST00000561642 IL6STP40189 918 aaPredicted RBP12.02□□□□□ -0.49
AC133561.2-202ENST00000561642 NEUROD2Q15784 382 aa12.02□□□□□ -0.49
AC133561.2-202ENST00000561642 WWC1Q8IX03 1113 aa12.02□□□□□ -0.49
AC133561.2-202ENST00000561642 PHF14O94880 888 aa12.01□□□□□ -0.49
AC133561.2-202ENST00000561642 PDIA6Q15084 440 aa12.01□□□□□ -0.49
AC133561.2-202ENST00000561642 ARXQ96QS3 562 aa12.01□□□□□ -0.49
AC133561.2-202ENST00000561642 NARFQ9UHQ1 456 aa12.01□□□□□ -0.49
AC133561.2-202ENST00000561642 UTRNP46939 3433 aa12.01□□□□□ -0.49
AC133561.2-202ENST00000561642 ZNF521Q96K83 1311 aa12□□□□□ -0.49
AC133561.2-202ENST00000561642 NLGN1Q8N2Q7 840 aa12□□□□□ -0.49
AC133561.2-202ENST00000561642 SYT17Q9BSW7 474 aa12□□□□□ -0.49
AC133561.2-202ENST00000561642 SRP68Q9UHB9 627 aaKnown RBP12□□□□□ -0.49
AC133561.2-202ENST00000561642 FKBP8Q14318 412 aa11.99□□□□□ -0.49
AC133561.2-202ENST00000561642 KRT24Q2M2I5 525 aa11.99□□□□□ -0.49
AC133561.2-202ENST00000561642 IFT57Q9NWB7 429 aa11.99□□□□□ -0.49
AC133561.2-202ENST00000561642 TSPYL4Q9UJ04 414 aa11.99□□□□□ -0.49
AC133561.2-202ENST00000561642 IL16Q14005 1332 aa11.98□□□□□ -0.49
AC133561.2-202ENST00000561642 RGL2O15211 777 aa11.98□□□□□ -0.49
AC133561.2-202ENST00000561642 CANXP27824 592 aaKnown RBP11.98□□□□□ -0.49
AC133561.2-202ENST00000561642 RFC4P35249 363 aa11.98□□□□□ -0.49
AC133561.2-202ENST00000561642 MSL1Q68DK7 614 aa11.98□□□□□ -0.49
AC133561.2-202ENST00000561642 FHDC1Q9C0D6 1143 aaPredicted RBP11.98□□□□□ -0.49
AC133561.2-202ENST00000561642 MBIPQ9NS73 344 aa11.98□□□□□ -0.49
AC133561.2-202ENST00000561642 C4AP0C0L4 1744 aa11.98□□□□□ -0.49
AC133561.2-202ENST00000561642 COL15A1P39059 1388 aa11.97□□□□□ -0.49
AC133561.2-202ENST00000561642 CAMTA2O94983 1202 aa11.97□□□□□ -0.49
AC133561.2-202ENST00000561642 DDR1Q08345 913 aa11.97□□□□□ -0.49
AC133561.2-202ENST00000561642 USPL1Q5W0Q7 1092 aa11.97□□□□□ -0.49
AC133561.2-202ENST00000561642 DIEXFQ68CQ4 756 aaKnown RBP11.97□□□□□ -0.49
AC133561.2-202ENST00000561642 MIER1Q8N108 512 aa11.97□□□□□ -0.49
AC133561.2-202ENST00000561642 NGEFQ8N5V2 710 aa11.97□□□□□ -0.49
AC133561.2-202ENST00000561642 U3KPZ7 1027 aaPredicted RBP11.97□□□□□ -0.49
AC133561.2-202ENST00000561642 ERBB4Q15303 1308 aa11.96□□□□□ -0.49
AC133561.2-202ENST00000561642 MMP10P09238 476 aa11.96□□□□□ -0.49
AC133561.2-202ENST00000561642 HOXB7P09629 217 aa11.96□□□□□ -0.49
AC133561.2-202ENST00000561642 GNAI1P63096 354 aa11.96□□□□□ -0.49
AC133561.2-202ENST00000561642 WDR63Q8IWG1 891 aa11.96□□□□□ -0.49
AC133561.2-202ENST00000561642 SPINK5Q9NQ38 1064 aaPredicted RBP11.96□□□□□ -0.49
AC133561.2-202ENST00000561642 CD2APQ9Y5K6 639 aa11.96□□□□□ -0.49
AC133561.2-202ENST00000561642 A0A087WZG4 1122 aa11.95□□□□□ -0.5
AC133561.2-202ENST00000561642 POLRMTO00411 1230 aaKnown RBP11.95□□□□□ -0.5
AC133561.2-202ENST00000561642 POLD1P28340 1107 aa11.95□□□□□ -0.5
AC133561.2-202ENST00000561642 PIP4K2AP48426 406 aaPredicted RBP11.95□□□□□ -0.5
AC133561.2-202ENST00000561642 NFIXQ14938 502 aa11.95□□□□□ -0.5
AC133561.2-202ENST00000561642 FAM9BQ8IZU0 186 aa11.95□□□□□ -0.5
AC133561.2-202ENST00000561642 C8orf58Q8NAV2 365 aa11.95□□□□□ -0.5
AC133561.2-202ENST00000561642 TBC1D2BQ9UPU7 963 aa11.95□□□□□ -0.5
AC133561.2-202ENST00000561642 CALD1Q05682 793 aaKnown RBP11.94□□□□□ -0.5
AC133561.2-202ENST00000561642 PROSER3Q2NL68 480 aa11.94□□□□□ -0.5
AC133561.2-202ENST00000561642 RTN4Q9NQC3 1192 aaKnown RBP11.94□□□□□ -0.5
AC133561.2-202ENST00000561642 SENP3-EIF4A1A0A087X0R7 540 aa11.93□□□□□ -0.5
AC133561.2-202ENST00000561642 KCNA3P22001 575 aa11.93□□□□□ -0.5
AC133561.2-202ENST00000561642 CLEC4GQ6UXB4 293 aa11.93□□□□□ -0.5
AC133561.2-202ENST00000561642 NLGN2Q8NFZ4 835 aa11.93□□□□□ -0.5
AC133561.2-202ENST00000561642 ERVV-1B6SEH8 477 aa11.92□□□□□ -0.5
AC133561.2-202ENST00000561642 ZPR1O75312 459 aa11.92□□□□□ -0.5
AC133561.2-202ENST00000561642 HLFQ16534 295 aa11.92□□□□□ -0.5
AC133561.2-202ENST00000561642 DUSP27Q5VZP5 1158 aa11.92□□□□□ -0.5
AC133561.2-202ENST00000561642 TBC1D9BQ66K14 1250 aa11.92□□□□□ -0.5
AC133561.2-202ENST00000561642 TTLL7Q6ZT98 887 aa11.92□□□□□ -0.5
AC133561.2-202ENST00000561642 TRMT2AQ8IZ69 625 aaKnown RBP11.92□□□□□ -0.5
AC133561.2-202ENST00000561642 TSPYL6Q8N831 410 aa11.92□□□□□ -0.5
AC133561.2-202ENST00000561642 DDX21Q9NR30 783 aaKnown RBP eCLIP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms