RNA–Protein interactions for RNA: ENST00000561631.1

RPAP1-203, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 401 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-203ENST00000561631 MRS2Q9HD23 443 aa17.37■□□□□ 0.37
RPAP1-203ENST00000561631 ADAMTS8Q9UP79 889 aa17.37■□□□□ 0.37
RPAP1-203ENST00000561631 SRCAPQ6ZRS2 3230 aa17.36■□□□□ 0.37
RPAP1-203ENST00000561631 CYP19A1P11511 503 aaPredicted RBP17.36■□□□□ 0.37
RPAP1-203ENST00000561631 NEUROD2Q15784 382 aa17.36■□□□□ 0.37
RPAP1-203ENST00000561631 RRP7AQ9Y3A4 280 aaKnown RBP17.36■□□□□ 0.37
RPAP1-203ENST00000561631 THUMPD2Q9BTF0 503 aaKnown RBP17.35■□□□□ 0.37
RPAP1-203ENST00000561631 ZBTB1Q9Y2K1 713 aa17.35■□□□□ 0.37
RPAP1-203ENST00000561631 SOS1Q07889 1333 aaPredicted RBP17.35■□□□□ 0.37
RPAP1-203ENST00000561631 ARHGEF1Q92888 912 aaKnown RBP17.34■□□□□ 0.37
RPAP1-203ENST00000561631 ZNF330Q9Y3S2 320 aaPredicted RBP17.34■□□□□ 0.37
RPAP1-203ENST00000561631 BCORQ6W2J9 1755 aa17.33■□□□□ 0.37
RPAP1-203ENST00000561631 USP42Q9H9J4 1324 aaKnown RBP17.33■□□□□ 0.36
RPAP1-203ENST00000561631 KCNQ3O43525 872 aa17.33■□□□□ 0.36
RPAP1-203ENST00000561631 ZPR1O75312 459 aa17.33■□□□□ 0.36
RPAP1-203ENST00000561631 CANXP27824 592 aaKnown RBP17.33■□□□□ 0.36
RPAP1-203ENST00000561631 INTS5Q6P9B9 1019 aaKnown RBP17.33■□□□□ 0.36
RPAP1-203ENST00000561631 TSPYL4Q9UJ04 414 aa17.33■□□□□ 0.36
RPAP1-203ENST00000561631 SNRPA1P09661 255 aaKnown RBP17.32■□□□□ 0.36
RPAP1-203ENST00000561631 NLGN1Q8N2Q7 840 aa17.32■□□□□ 0.36
RPAP1-203ENST00000561631 SYT17Q9BSW7 474 aa17.31■□□□□ 0.36
RPAP1-203ENST00000561631 A0A087WZG4 1122 aa17.3■□□□□ 0.36
RPAP1-203ENST00000561631 MMP10P09238 476 aa17.3■□□□□ 0.36
RPAP1-203ENST00000561631 MIS18AQ9NYP9 233 aa17.3■□□□□ 0.36
RPAP1-203ENST00000561631 KIF13BQ9NQT8 1826 aa17.29■□□□□ 0.36
RPAP1-203ENST00000561631 GYS1P13807 737 aa17.29■□□□□ 0.36
RPAP1-203ENST00000561631 SRP68Q9UHB9 627 aaKnown RBP17.29■□□□□ 0.36
RPAP1-203ENST00000561631 PARP3Q9Y6F1 533 aa17.29■□□□□ 0.36
RPAP1-203ENST00000561631 APAF1O14727 1248 aa17.28■□□□□ 0.36
RPAP1-203ENST00000561631 CALD1Q05682 793 aaKnown RBP17.28■□□□□ 0.36
RPAP1-203ENST00000561631 IL6STP40189 918 aaPredicted RBP17.27■□□□□ 0.36
RPAP1-203ENST00000561631 CCDC184Q52MB2 194 aa17.27■□□□□ 0.36
RPAP1-203ENST00000561631 USPL1Q5W0Q7 1092 aa17.27■□□□□ 0.36
RPAP1-203ENST00000561631 BABAM1Q9NWV8 329 aa17.27■□□□□ 0.36
RPAP1-203ENST00000561631 NARFQ9UHQ1 456 aa17.27■□□□□ 0.36
RPAP1-203ENST00000561631 LAS1LQ9Y4W2 734 aaKnown RBP17.27■□□□□ 0.36
RPAP1-203ENST00000561631 CD2APQ9Y5K6 639 aa17.26■□□□□ 0.35
RPAP1-203ENST00000561631 C10orf71Q711Q0 1435 aa17.25■□□□□ 0.35
RPAP1-203ENST00000561631 PRAMEF22A3QJZ6 481 aa17.25■□□□□ 0.35
RPAP1-203ENST00000561631 A1BGP04217 495 aa17.25■□□□□ 0.35
RPAP1-203ENST00000561631 EIF5P55010 431 aaKnown RBP17.25■□□□□ 0.35
RPAP1-203ENST00000561631 EIF4A1P60842 406 aaKnown RBP17.25■□□□□ 0.35
RPAP1-203ENST00000561631 PELP1Q8IZL8 1130 aaKnown RBP17.25■□□□□ 0.35
RPAP1-203ENST00000561631 USP16Q9Y5T5 823 aa17.25■□□□□ 0.35
RPAP1-203ENST00000561631 AFDNP55196 1824 aaKnown RBP17.25■□□□□ 0.35
RPAP1-203ENST00000561631 FKBP8Q14318 412 aa17.24■□□□□ 0.35
RPAP1-203ENST00000561631 TRIM35Q9UPQ4 493 aa17.24■□□□□ 0.35
RPAP1-203ENST00000561631 GIGYF1O75420 1035 aaPredicted RBP17.23■□□□□ 0.35
RPAP1-203ENST00000561631 PIP4K2AP48426 406 aaPredicted RBP17.23■□□□□ 0.35
RPAP1-203ENST00000561631 DZIP3Q86Y13 1208 aaKnown RBP17.23■□□□□ 0.35
RPAP1-203ENST00000561631 NLGN2Q8NFZ4 835 aa17.23■□□□□ 0.35
RPAP1-203ENST00000561631 ZNF652Q9Y2D9 606 aa17.23■□□□□ 0.35
RPAP1-203ENST00000561631 N4BP2Q86UW6 1770 aaPredicted RBP17.23■□□□□ 0.35
RPAP1-203ENST00000561631 NRXN2Q9P2S2 1712 aa17.22■□□□□ 0.35
RPAP1-203ENST00000561631 GPR162Q16538 588 aa17.22■□□□□ 0.35
RPAP1-203ENST00000561631 KIAA1551Q9HCM1 1747 aa17.21■□□□□ 0.35
RPAP1-203ENST00000561631 NPHP1O15259 732 aa17.21■□□□□ 0.35
RPAP1-203ENST00000561631 FAM9BQ8IZU0 186 aa17.21■□□□□ 0.35
RPAP1-203ENST00000561631 TBC1D2BQ9UPU7 963 aa17.21■□□□□ 0.35
RPAP1-203ENST00000561631 ERBB4Q15303 1308 aa17.21■□□□□ 0.34
RPAP1-203ENST00000561631 CHD4Q14839 1912 aa17.2■□□□□ 0.34
RPAP1-203ENST00000561631 CARMIL3Q8ND23 1372 aa17.2■□□□□ 0.34
RPAP1-203ENST00000561631 CFAP44Q96MT7 982 aa17.2■□□□□ 0.34
RPAP1-203ENST00000561631 PXDNLA1KZ92 1463 aa17.19■□□□□ 0.34
RPAP1-203ENST00000561631 GNAI1P63096 354 aa17.19■□□□□ 0.34
RPAP1-203ENST00000561631 DDR1Q08345 913 aa17.19■□□□□ 0.34
RPAP1-203ENST00000561631 KIF6Q6ZMV9 814 aa17.19■□□□□ 0.34
RPAP1-203ENST00000561631 BICDL1Q6ZP65 573 aa17.19■□□□□ 0.34
RPAP1-203ENST00000561631 IFT57Q9NWB7 429 aa17.19■□□□□ 0.34
RPAP1-203ENST00000561631 POLRMTO00411 1230 aaKnown RBP17.18■□□□□ 0.34
RPAP1-203ENST00000561631 CHL1O00533 1208 aa17.18■□□□□ 0.34
RPAP1-203ENST00000561631 MYL6BP14649 208 aa17.18■□□□□ 0.34
RPAP1-203ENST00000561631 EIF2S2P20042 333 aaKnown RBP17.18■□□□□ 0.34
RPAP1-203ENST00000561631 NFIXQ14938 502 aa17.18■□□□□ 0.34
RPAP1-203ENST00000561631 BRCA1P38398 1863 aaKnown RBP17.18■□□□□ 0.34
RPAP1-203ENST00000561631 DLEC1Q9Y238 1755 aa17.17■□□□□ 0.34
RPAP1-203ENST00000561631 NUP98P52948 1817 aa17.17■□□□□ 0.34
RPAP1-203ENST00000561631 CAMTA2O94983 1202 aa17.17■□□□□ 0.34
RPAP1-203ENST00000561631 ANKRD36CQ5JPF3 1778 aa17.16■□□□□ 0.34
RPAP1-203ENST00000561631 NBPF26B4DH59 902 aa17.16■□□□□ 0.34
RPAP1-203ENST00000561631 HOXB7P09629 217 aa17.16■□□□□ 0.34
RPAP1-203ENST00000561631 CCDC27Q2M243 656 aa17.16■□□□□ 0.34
RPAP1-203ENST00000561631 NBPF10Q6P3W6 841 aaKnown RBP17.16■□□□□ 0.34
RPAP1-203ENST00000561631 NGEFQ8N5V2 710 aa17.16■□□□□ 0.34
RPAP1-203ENST00000561631 NBPF15Q8N660 670 aa17.16■□□□□ 0.34
RPAP1-203ENST00000561631 BCL2L12Q9HB09 334 aa17.16■□□□□ 0.34
RPAP1-203ENST00000561631 MBIPQ9NS73 344 aa17.16■□□□□ 0.34
RPAP1-203ENST00000561631 SENP3-EIF4A1A0A087X0R7 540 aa17.15■□□□□ 0.34
RPAP1-203ENST00000561631 TGFB2P61812 414 aa17.15■□□□□ 0.34
RPAP1-203ENST00000561631 TBC1D9BQ66K14 1250 aa17.15■□□□□ 0.34
RPAP1-203ENST00000561631 SETDB2Q96T68 719 aa17.15■□□□□ 0.34
RPAP1-203ENST00000561631 SERPINB2P05120 415 aa17.14■□□□□ 0.33
RPAP1-203ENST00000561631 TM4SF1P30408 202 aa17.14■□□□□ 0.33
RPAP1-203ENST00000561631 HDGFL1Q5TGJ6 251 aa17.14■□□□□ 0.33
RPAP1-203ENST00000561631 NECTIN2Q92692 538 aa17.14■□□□□ 0.33
RPAP1-203ENST00000561631 ARFGEF1Q9Y6D6 1849 aa17.14■□□□□ 0.33
RPAP1-203ENST00000561631 ANKRD31Q8N7Z5 1873 aa17.14■□□□□ 0.33
RPAP1-203ENST00000561631 RGL2O15211 777 aa17.13■□□□□ 0.33
RPAP1-203ENST00000561631 ST5P78524 1137 aa17.13■□□□□ 0.33
RPAP1-203ENST00000561631 KRT24Q2M2I5 525 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms