RNA–Protein interactions for RNA: ENST00000560379.1

USP8-210, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-210ENST00000560379 ESPNB1AK53 854 aa9.02□□□□□ -0.97
USP8-210ENST00000560379 RNF225M0QZC1 329 aaPredicted RBP9.02□□□□□ -0.97
USP8-210ENST00000560379 SOX11P35716 441 aa9.02□□□□□ -0.97
USP8-210ENST00000560379 RAB15P59190 212 aa9.02□□□□□ -0.97
USP8-210ENST00000560379 LYPD4Q6UWN0 246 aa9.02□□□□□ -0.97
USP8-210ENST00000560379 ADAMTS2O95450 1211 aa9.01□□□□□ -0.97
USP8-210ENST00000560379 IRS1P35568 1242 aa9.01□□□□□ -0.97
USP8-210ENST00000560379 PTGIRP43119 386 aa9.01□□□□□ -0.97
USP8-210ENST00000560379 B4GALNT3Q6L9W6 998 aa9.01□□□□□ -0.97
USP8-210ENST00000560379 SEMA3FQ13275 785 aa9□□□□□ -0.97
USP8-210ENST00000560379 NBPF20Q3BBV1 942 aa9□□□□□ -0.97
USP8-210ENST00000560379 ARAP1Q96P48 1450 aa9□□□□□ -0.97
USP8-210ENST00000560379 UGGT2Q9NYU1 1516 aa9□□□□□ -0.97
USP8-210ENST00000560379 RBM47A0AV96 593 aaKnown RBP8.99□□□□□ -0.97
USP8-210ENST00000560379 TBC1D9Q6ZT07 1266 aa8.99□□□□□ -0.97
USP8-210ENST00000560379 DNMT3AQ9Y6K1 912 aaPredicted RBP8.98□□□□□ -0.97
USP8-210ENST00000560379 ATP9BO43861 1147 aa8.97□□□□□ -0.97
USP8-210ENST00000560379 BRD2P25440 801 aaKnown RBP8.97□□□□□ -0.97
USP8-210ENST00000560379 CYLDQ9NQC7 956 aa8.97□□□□□ -0.97
USP8-210ENST00000560379 KIAA0556O60303 1618 aa8.97□□□□□ -0.97
USP8-210ENST00000560379 GOLGA3Q08378 1498 aa8.96□□□□□ -0.97
USP8-210ENST00000560379 ERCC6L2Q5T890 1561 aa8.96□□□□□ -0.97
USP8-210ENST00000560379 CELA2BP08218 269 aaPredicted RBP8.96□□□□□ -0.98
USP8-210ENST00000560379 RHOQP17081 205 aa8.96□□□□□ -0.98
USP8-210ENST00000560379 SRSF11Q05519 484 aaKnown RBP8.96□□□□□ -0.98
USP8-210ENST00000560379 GPAT2Q6NUI2 795 aa8.96□□□□□ -0.98
USP8-210ENST00000560379 LYSMD3Q7Z3D4 306 aa8.96□□□□□ -0.98
USP8-210ENST00000560379 DZIP3Q86Y13 1208 aaKnown RBP8.96□□□□□ -0.98
USP8-210ENST00000560379 CCER1Q8TC90 406 aaPredicted RBP8.96□□□□□ -0.98
USP8-210ENST00000560379 ZNF837Q96EG3 531 aaPredicted RBP8.96□□□□□ -0.98
USP8-210ENST00000560379 IGSF5Q9NSI5 407 aa8.96□□□□□ -0.98
USP8-210ENST00000560379 PRG4Q92954 1404 aaPredicted RBP8.96□□□□□ -0.98
USP8-210ENST00000560379 TXNDC2Q86VQ3 553 aa8.95□□□□□ -0.98
USP8-210ENST00000560379 CARMIL2Q6F5E8 1435 aa8.95□□□□□ -0.98
USP8-210ENST00000560379 SAMD9Q5K651 1589 aa8.95□□□□□ -0.98
USP8-210ENST00000560379 RNF144AP50876 292 aaPredicted RBP8.94□□□□□ -0.98
USP8-210ENST00000560379 ELOAQ14241 798 aaKnown RBP8.94□□□□□ -0.98
USP8-210ENST00000560379 KANK4Q5T7N3 995 aaPredicted RBP8.94□□□□□ -0.98
USP8-210ENST00000560379 TMEM164Q5U3C3 297 aa8.94□□□□□ -0.98
USP8-210ENST00000560379 PRICKLE2Q7Z3G6 844 aa8.94□□□□□ -0.98
USP8-210ENST00000560379 EFCAB5A4FU69 1503 aa8.94□□□□□ -0.98
USP8-210ENST00000560379 GPR25O00155 361 aa8.93□□□□□ -0.98
USP8-210ENST00000560379 ITGB2P05107 769 aa8.93□□□□□ -0.98
USP8-210ENST00000560379 STK32AQ8WU08 396 aa8.93□□□□□ -0.98
USP8-210ENST00000560379 ZMIZ1Q9ULJ6 1067 aa8.93□□□□□ -0.98
USP8-210ENST00000560379 DISP1Q96F81 1524 aa8.93□□□□□ -0.98
USP8-210ENST00000560379 MARSP56192 900 aaKnown RBP8.92□□□□□ -0.98
USP8-210ENST00000560379 EIF4G2P78344 907 aaKnown RBP eCLIP8.92□□□□□ -0.98
USP8-210ENST00000560379 PHLDB3Q6NSJ2 640 aa8.92□□□□□ -0.98
USP8-210ENST00000560379 KANK3Q6NY19 840 aa8.92□□□□□ -0.98
USP8-210ENST00000560379 PNMA1Q8ND90 353 aa8.92□□□□□ -0.98
USP8-210ENST00000560379 UBE2Q2Q8WVN8 375 aa8.92□□□□□ -0.98
USP8-210ENST00000560379 DBN1Q16643 649 aa8.91□□□□□ -0.98
USP8-210ENST00000560379 DNAJC14Q6Y2X3 702 aaPredicted RBP8.91□□□□□ -0.98
USP8-210ENST00000560379 KIAA1522Q9P206 1035 aaPredicted RBP8.91□□□□□ -0.98
USP8-210ENST00000560379 GIGYF1O75420 1035 aaPredicted RBP8.9□□□□□ -0.98
USP8-210ENST00000560379 ERCC3P19447 782 aa8.9□□□□□ -0.98
USP8-210ENST00000560379 DHX37Q8IY37 1157 aaKnown RBP8.9□□□□□ -0.98
USP8-210ENST00000560379 SEPT12Q8IYM1 358 aa8.9□□□□□ -0.98
USP8-210ENST00000560379 TRIM22Q8IYM9 498 aa8.9□□□□□ -0.98
USP8-210ENST00000560379 MRRFQ96E11 262 aaKnown RBP8.9□□□□□ -0.98
USP8-210ENST00000560379 SCARF2Q96GP6 870 aaPredicted RBP8.9□□□□□ -0.98
USP8-210ENST00000560379 NOVA2Q9UNW9 492 aaKnown RBP8.9□□□□□ -0.98
USP8-210ENST00000560379 MBIPQ9NS73 344 aa8.89□□□□□ -0.99
USP8-210ENST00000560379 TNIKQ9UKE5 1360 aa8.88□□□□□ -0.99
USP8-210ENST00000560379 ADCY10Q96PN6 1610 aa8.88□□□□□ -0.99
USP8-210ENST00000560379 ATP5J2-PTCD1G3V325 749 aa8.88□□□□□ -0.99
USP8-210ENST00000560379 FBXO45P0C2W1 286 aa8.88□□□□□ -0.99
USP8-210ENST00000560379 ARID4AP29374 1257 aaPredicted RBP8.88□□□□□ -0.99
USP8-210ENST00000560379 UHRF1BP1LA0JNW5 1464 aa8.88□□□□□ -0.99
USP8-210ENST00000560379 CNTNAP5Q8WYK1 1306 aa8.87□□□□□ -0.99
USP8-210ENST00000560379 A0A1W2PRU2 124 aa8.87□□□□□ -0.99
USP8-210ENST00000560379 PIK3CDO00329 1044 aa8.87□□□□□ -0.99
USP8-210ENST00000560379 IGHA1P01876 353 aa8.87□□□□□ -0.99
USP8-210ENST00000560379 ERVK-9P63128 1117 aa8.87□□□□□ -0.99
USP8-210ENST00000560379 ACDQ96AP0 544 aa8.87□□□□□ -0.99
USP8-210ENST00000560379 MAPKBP1O60336 1514 aa8.86□□□□□ -0.99
USP8-210ENST00000560379 ABCC2Q92887 1545 aa8.86□□□□□ -0.99
USP8-210ENST00000560379 MEN1O00255 615 aa8.86□□□□□ -0.99
USP8-210ENST00000560379 THBS1P07996 1170 aa8.86□□□□□ -0.99
USP8-210ENST00000560379 SSFA2P28290 1259 aa8.86□□□□□ -0.99
USP8-210ENST00000560379 GPC1P35052 558 aa8.86□□□□□ -0.99
USP8-210ENST00000560379 SCTRP47872 440 aa8.86□□□□□ -0.99
USP8-210ENST00000560379 MAP3K10Q02779 954 aa8.86□□□□□ -0.99
USP8-210ENST00000560379 SIRT1Q96EB6 747 aa8.86□□□□□ -0.99
USP8-210ENST00000560379 USP17L3A6NCW0 530 aa8.85□□□□□ -0.99
USP8-210ENST00000560379 USP17L4A6NCW7 530 aa8.85□□□□□ -0.99
USP8-210ENST00000560379 ZBBXA8MT70 800 aa8.85□□□□□ -0.99
USP8-210ENST00000560379 ZNF16P17020 682 aaPredicted RBP8.85□□□□□ -0.99
USP8-210ENST00000560379 FOXK2Q01167 660 aa8.85□□□□□ -0.99
USP8-210ENST00000560379 POU4F2Q12837 409 aa8.85□□□□□ -0.99
USP8-210ENST00000560379 NR1H3Q13133 447 aa8.85□□□□□ -0.99
USP8-210ENST00000560379 PLA2G4EQ3MJ16 856 aa8.85□□□□□ -0.99
USP8-210ENST00000560379 NOM1Q5C9Z4 860 aaKnown RBP8.85□□□□□ -0.99
USP8-210ENST00000560379 USP17L2Q6R6M4 530 aa8.85□□□□□ -0.99
USP8-210ENST00000560379 USP17L1Q7RTZ2 530 aa8.85□□□□□ -0.99
USP8-210ENST00000560379 GTPBP3Q969Y2 492 aaKnown RBP8.85□□□□□ -0.99
USP8-210ENST00000560379 PCDHB9Q9Y5E1 797 aa8.85□□□□□ -0.99
USP8-210ENST00000560379 PTPRGP23470 1445 aa8.85□□□□□ -0.99
USP8-210ENST00000560379 SOWAHDA6NJG2 315 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms