RNA–Protein interactions for RNA: ENST00000560311.1

IRF9-208, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-208ENST00000560311 RGPD1P0DJD0 1748 aa9.09□□□□□ -0.95
IRF9-208ENST00000560311 TNS1Q9HBL0 1735 aaKnown RBP9.09□□□□□ -0.95
IRF9-208ENST00000560311 EVA1CP58658 441 aa9.09□□□□□ -0.95
IRF9-208ENST00000560311 USP35Q9P2H5 1018 aa9.09□□□□□ -0.95
IRF9-208ENST00000560311 LTN1O94822 1766 aa9.09□□□□□ -0.95
IRF9-208ENST00000560311 KIF20BQ96Q89 1820 aa9.08□□□□□ -0.96
IRF9-208ENST00000560311 TSR1Q2NL82 804 aaKnown RBP9.08□□□□□ -0.96
IRF9-208ENST00000560311 AMER1Q5JTC6 1135 aaPredicted RBP9.08□□□□□ -0.96
IRF9-208ENST00000560311 BARGINQ6ZT62 677 aa9.08□□□□□ -0.96
IRF9-208ENST00000560311 ARHGEF25Q86VW2 580 aa9.08□□□□□ -0.96
IRF9-208ENST00000560311 TCP11L2Q8N4U5 519 aa9.08□□□□□ -0.96
IRF9-208ENST00000560311 WDR17Q8IZU2 1322 aa9.07□□□□□ -0.96
IRF9-208ENST00000560311 DISP2A7MBM2 1401 aa9.07□□□□□ -0.96
IRF9-208ENST00000560311 NSD3Q9BZ95 1437 aa9.07□□□□□ -0.96
IRF9-208ENST00000560311 CDCA8Q53HL2 280 aa9.07□□□□□ -0.96
IRF9-208ENST00000560311 NKX2-3Q8TAU0 364 aa9.07□□□□□ -0.96
IRF9-208ENST00000560311 CCDC125Q86Z20 511 aa9.06□□□□□ -0.96
IRF9-208ENST00000560311 THRAP3Q9Y2W1 955 aaKnown RBP9.06□□□□□ -0.96
IRF9-208ENST00000560311 FAM208AQ9UK61 1670 aaKnown RBP9.06□□□□□ -0.96
IRF9-208ENST00000560311 TNS2Q63HR2 1409 aa9.05□□□□□ -0.96
IRF9-208ENST00000560311 PEAK1Q9H792 1746 aa9.05□□□□□ -0.96
IRF9-208ENST00000560311 RTL1A6NKG5 1358 aa9.05□□□□□ -0.96
IRF9-208ENST00000560311 CSB-PGBD3P0DP91 1061 aa9.05□□□□□ -0.96
IRF9-208ENST00000560311 FAM182BQ5T319 152 aa9.05□□□□□ -0.96
IRF9-208ENST00000560311 TOM1L2Q6ZVM7 507 aa9.05□□□□□ -0.96
IRF9-208ENST00000560311 COG3Q96JB2 828 aa9.05□□□□□ -0.96
IRF9-208ENST00000560311 OVOS2A0A0G2JMS6 1433 aa9.05□□□□□ -0.96
IRF9-208ENST00000560311 CCDC7Q96M83 1385 aa9.04□□□□□ -0.96
IRF9-208ENST00000560311 C3orf80F5H4A9 247 aa9.04□□□□□ -0.96
IRF9-208ENST00000560311 MAP3K7O43318 606 aa9.04□□□□□ -0.96
IRF9-208ENST00000560311 HSPA5P11021 654 aaKnown RBP9.04□□□□□ -0.96
IRF9-208ENST00000560311 EIF4G2P78344 907 aaKnown RBP eCLIP9.04□□□□□ -0.96
IRF9-208ENST00000560311 SF3B2Q13435 895 aaKnown RBP9.04□□□□□ -0.96
IRF9-208ENST00000560311 FAM198AQ9UFP1 575 aa9.04□□□□□ -0.96
IRF9-208ENST00000560311 RGPD5Q99666 1765 aa9.04□□□□□ -0.96
IRF9-208ENST00000560311 EN1Q05925 392 aaPredicted RBP9.03□□□□□ -0.96
IRF9-208ENST00000560311 CAMK2BQ13554 666 aa9.03□□□□□ -0.96
IRF9-208ENST00000560311 NBR1Q14596 966 aa9.03□□□□□ -0.96
IRF9-208ENST00000560311 DEFB132Q7Z7B7 95 aa9.03□□□□□ -0.96
IRF9-208ENST00000560311 MAP3K19Q56UN5 1328 aa9.03□□□□□ -0.96
IRF9-208ENST00000560311 RNF40O75150 1001 aa9.02□□□□□ -0.97
IRF9-208ENST00000560311 APLP1P51693 650 aa9.02□□□□□ -0.97
IRF9-208ENST00000560311 PDE3BQ13370 1112 aa9.02□□□□□ -0.97
IRF9-208ENST00000560311 ANKRD24Q8TF21 1146 aa9.02□□□□□ -0.97
IRF9-208ENST00000560311 CDCA7LQ96GN5 454 aa9.02□□□□□ -0.97
IRF9-208ENST00000560311 POLR3GLQ9BT43 218 aa9.02□□□□□ -0.97
IRF9-208ENST00000560311 CARD10Q9BWT7 1032 aa9.02□□□□□ -0.97
IRF9-208ENST00000560311 GGNBP2Q9H3C7 697 aa9.02□□□□□ -0.97
IRF9-208ENST00000560311 ANKRD26Q9UPS8 1709 aa9.02□□□□□ -0.97
IRF9-208ENST00000560311 RREB1Q92766 1687 aa9.01□□□□□ -0.97
IRF9-208ENST00000560311 BAG6P46379 1132 aa9.01□□□□□ -0.97
IRF9-208ENST00000560311 FAM196AQ6ZSG2 479 aa9.01□□□□□ -0.97
IRF9-208ENST00000560311 SMG6Q86US8 1419 aaKnown RBP9.01□□□□□ -0.97
IRF9-208ENST00000560311 CDCA7Q9BWT1 371 aaPredicted RBP9.01□□□□□ -0.97
IRF9-208ENST00000560311 FYB1O15117 783 aa9□□□□□ -0.97
IRF9-208ENST00000560311 HOXC9P31274 260 aa9□□□□□ -0.97
IRF9-208ENST00000560311 DDB1Q16531 1140 aa9□□□□□ -0.97
IRF9-208ENST00000560311 IP6K1Q92551 441 aa9□□□□□ -0.97
IRF9-208ENST00000560311 CARD14Q9BXL6 1004 aa9□□□□□ -0.97
IRF9-208ENST00000560311 NLRP2Q9NX02 1062 aa9□□□□□ -0.97
IRF9-208ENST00000560311 MEGF6O75095 1541 aa9□□□□□ -0.97
IRF9-208ENST00000560311 FLT4P35916 1363 aa8.99□□□□□ -0.97
IRF9-208ENST00000560311 RGPD3A6NKT7 1758 aaPredicted RBP8.99□□□□□ -0.97
IRF9-208ENST00000560311 RGPD4Q7Z3J3 1758 aa8.99□□□□□ -0.97
IRF9-208ENST00000560311 BCL9O00512 1426 aa8.99□□□□□ -0.97
IRF9-208ENST00000560311 POTECB2RU33 542 aa8.99□□□□□ -0.97
IRF9-208ENST00000560311 TRIM37O94972 964 aa8.99□□□□□ -0.97
IRF9-208ENST00000560311 PRSS12P56730 875 aa8.99□□□□□ -0.97
IRF9-208ENST00000560311 RRS1Q15050 365 aaKnown RBP8.99□□□□□ -0.97
IRF9-208ENST00000560311 PNMA3Q9UL41 463 aa8.99□□□□□ -0.97
IRF9-208ENST00000560311 NHSQ6T4R5 1651 aa8.99□□□□□ -0.97
IRF9-208ENST00000560311 NUP188Q5SRE5 1749 aa8.99□□□□□ -0.97
IRF9-208ENST00000560311 CGNL1Q0VF96 1302 aa8.99□□□□□ -0.97
IRF9-208ENST00000560311 KIF24Q5T7B8 1368 aa8.99□□□□□ -0.97
IRF9-208ENST00000560311 PARD3Q8TEW0 1356 aa8.99□□□□□ -0.97
IRF9-208ENST00000560311 FBLN1P23142 703 aa8.98□□□□□ -0.97
IRF9-208ENST00000560311 AMPHP49418 695 aa8.98□□□□□ -0.97
IRF9-208ENST00000560311 COPS2P61201 443 aa8.98□□□□□ -0.97
IRF9-208ENST00000560311 TRIM67Q6ZTA4 783 aa8.98□□□□□ -0.97
IRF9-208ENST00000560311 TATDN2Q93075 761 aa8.98□□□□□ -0.97
IRF9-208ENST00000560311 LTV1Q96GA3 475 aaPredicted RBP8.98□□□□□ -0.97
IRF9-208ENST00000560311 NSD2O96028 1365 aa8.98□□□□□ -0.97
IRF9-208ENST00000560311 IL2RBP14784 551 aa8.97□□□□□ -0.97
IRF9-208ENST00000560311 MARCH10Q8NA82 808 aaPredicted RBP8.97□□□□□ -0.97
IRF9-208ENST00000560311 KIF7Q2M1P5 1343 aa8.97□□□□□ -0.97
IRF9-208ENST00000560311 INSRP06213 1382 aa8.97□□□□□ -0.97
IRF9-208ENST00000560311 SHANK3Q9BYB0 1731 aa8.97□□□□□ -0.97
IRF9-208ENST00000560311 LRP5O75197 1615 aa8.96□□□□□ -0.98
IRF9-208ENST00000560311 C11orf95C9JLR9 678 aaPredicted RBP8.96□□□□□ -0.98
IRF9-208ENST00000560311 GGCXP38435 758 aa8.96□□□□□ -0.98
IRF9-208ENST00000560311 EZH2Q15910 746 aaKnown RBP8.96□□□□□ -0.98
IRF9-208ENST00000560311 RTN4Q9NQC3 1192 aaKnown RBP8.96□□□□□ -0.98
IRF9-208ENST00000560311 EMILIN1Q9Y6C2 1016 aa8.96□□□□□ -0.98
IRF9-208ENST00000560311 NBPF26B4DH59 902 aa8.95□□□□□ -0.98
IRF9-208ENST00000560311 APBA3O96018 575 aa8.95□□□□□ -0.98
IRF9-208ENST00000560311 PRIM1P49642 420 aaKnown RBP8.95□□□□□ -0.98
IRF9-208ENST00000560311 NCAPD2Q15021 1401 aa8.95□□□□□ -0.98
IRF9-208ENST00000560311 DOT1LQ8TEK3 1739 aa8.94□□□□□ -0.98
IRF9-208ENST00000560311 RGPD2P0DJD1 1756 aa8.94□□□□□ -0.98
IRF9-208ENST00000560311 SBF2Q86WG5 1849 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms