RNA–Protein interactions for RNA: ENST00000560288.1

SPPL2A-207, Transcript of signal peptide peptidase like 2A, humanhuman

TSL 2

Gene SPPL2A, Length 742 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL2A-207ENST00000560288 USP16Q9Y5T5 823 aa21.45■■□□□ 1.02
SPPL2A-207ENST00000560288 UTRNP46939 3433 aa21.45■■□□□ 1.02
SPPL2A-207ENST00000560288 SSFA2P28290 1259 aa21.44■■□□□ 1.02
SPPL2A-207ENST00000560288 MBIPQ9NS73 344 aa21.44■■□□□ 1.02
SPPL2A-207ENST00000560288 PNPLA7Q6ZV29 1317 aa21.43■■□□□ 1.02
SPPL2A-207ENST00000560288 LY75O60449 1722 aa21.43■■□□□ 1.02
SPPL2A-207ENST00000560288 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.42■■□□□ 1.02
SPPL2A-207ENST00000560288 PRAMEF22A3QJZ6 481 aa21.42■■□□□ 1.02
SPPL2A-207ENST00000560288 TRAPPC3LQ5T215 181 aa21.42■■□□□ 1.02
SPPL2A-207ENST00000560288 COL23A1Q86Y22 540 aaPredicted RBP21.42■■□□□ 1.02
SPPL2A-207ENST00000560288 SLC16A10Q8TF71 515 aa21.42■■□□□ 1.02
SPPL2A-207ENST00000560288 ADRA2BP18089 450 aa21.41■■□□□ 1.02
SPPL2A-207ENST00000560288 ARXQ96QS3 562 aa21.41■■□□□ 1.02
SPPL2A-207ENST00000560288 AMIGO3Q86WK7 504 aa21.4■■□□□ 1.02
SPPL2A-207ENST00000560288 ZNF521Q96K83 1311 aa21.39■■□□□ 1.01
SPPL2A-207ENST00000560288 MSH5O43196 834 aa21.39■■□□□ 1.01
SPPL2A-207ENST00000560288 PHF14O94880 888 aa21.39■■□□□ 1.01
SPPL2A-207ENST00000560288 A1BGP04217 495 aa21.39■■□□□ 1.01
SPPL2A-207ENST00000560288 ARHGEF1Q92888 912 aaKnown RBP21.39■■□□□ 1.01
SPPL2A-207ENST00000560288 ZBTB1Q9Y2K1 713 aa21.39■■□□□ 1.01
SPPL2A-207ENST00000560288 HOXB7P09629 217 aa21.38■■□□□ 1.01
SPPL2A-207ENST00000560288 CANXP27824 592 aaKnown RBP21.38■■□□□ 1.01
SPPL2A-207ENST00000560288 SMIM5Q71RC9 77 aa21.38■■□□□ 1.01
SPPL2A-207ENST00000560288 IL6STP40189 918 aaPredicted RBP21.37■■□□□ 1.01
SPPL2A-207ENST00000560288 EIF5P55010 431 aaKnown RBP21.37■■□□□ 1.01
SPPL2A-207ENST00000560288 ZNF831Q5JPB2 1677 aa21.37■■□□□ 1.01
SPPL2A-207ENST00000560288 SOS1Q07889 1333 aaPredicted RBP21.36■■□□□ 1.01
SPPL2A-207ENST00000560288 RFC4P35249 363 aa21.36■■□□□ 1.01
SPPL2A-207ENST00000560288 GOLGA2Q08379 1002 aa21.36■■□□□ 1.01
SPPL2A-207ENST00000560288 DUSP27Q5VZP5 1158 aa21.36■■□□□ 1.01
SPPL2A-207ENST00000560288 MYH16Q9H6N6 1097 aa21.36■■□□□ 1.01
SPPL2A-207ENST00000560288 SIPA1L3O60292 1781 aaPredicted RBP21.36■■□□□ 1.01
SPPL2A-207ENST00000560288 TUBGCP6Q96RT7 1819 aa21.35■■□□□ 1.01
SPPL2A-207ENST00000560288 A0A087WZG4 1122 aa21.35■■□□□ 1.01
SPPL2A-207ENST00000560288 KRT24Q2M2I5 525 aa21.35■■□□□ 1.01
SPPL2A-207ENST00000560288 NPM2Q86SE8 214 aaKnown RBP21.35■■□□□ 1.01
SPPL2A-207ENST00000560288 TSR2Q969E8 191 aaKnown RBP21.35■■□□□ 1.01
SPPL2A-207ENST00000560288 CHMP4AQ9BY43 222 aa21.35■■□□□ 1.01
SPPL2A-207ENST00000560288 DLG5Q8TDM6 1919 aa21.34■■□□□ 1.01
SPPL2A-207ENST00000560288 EIF2S2P20042 333 aaKnown RBP21.34■■□□□ 1.01
SPPL2A-207ENST00000560288 C8orf58Q8NAV2 365 aa21.34■■□□□ 1.01
SPPL2A-207ENST00000560288 SPINK5Q9NQ38 1064 aaPredicted RBP21.34■■□□□ 1.01
SPPL2A-207ENST00000560288 ERBB4Q15303 1308 aa21.33■■□□□ 1.01
SPPL2A-207ENST00000560288 C4BP0C0L5 1744 aa21.33■■□□□ 1.01
SPPL2A-207ENST00000560288 NBPF26B4DH59 902 aa21.33■■□□□ 1.01
SPPL2A-207ENST00000560288 NBPF10Q6P3W6 841 aaKnown RBP21.33■■□□□ 1.01
SPPL2A-207ENST00000560288 NBPF15Q8N660 670 aa21.33■■□□□ 1.01
SPPL2A-207ENST00000560288 QSER1Q2KHR3 1735 aa21.32■■□□□ 1
SPPL2A-207ENST00000560288 E9PSI1 815 aa21.32■■□□□ 1
SPPL2A-207ENST00000560288 ZNF784Q8NCA9 323 aaPredicted RBP21.32■■□□□ 1
SPPL2A-207ENST00000560288 C5P01031 1676 aa21.31■■□□□ 1
SPPL2A-207ENST00000560288 ELL2O00472 640 aaPredicted RBP21.31■■□□□ 1
SPPL2A-207ENST00000560288 HNRNPUQ00839 825 aaKnown RBP eCLIP21.31■■□□□ 1
SPPL2A-207ENST00000560288 KLHL34Q8N239 644 aa21.31■■□□□ 1
SPPL2A-207ENST00000560288 NLGN1Q8N2Q7 840 aa21.31■■□□□ 1
SPPL2A-207ENST00000560288 FANCIQ9NVI1 1328 aa21.3■■□□□ 1
SPPL2A-207ENST00000560288 ZPR1O75312 459 aa21.3■■□□□ 1
SPPL2A-207ENST00000560288 SLFN5Q08AF3 891 aa21.3■■□□□ 1
SPPL2A-207ENST00000560288 HDGFL1Q5TGJ6 251 aa21.3■■□□□ 1
SPPL2A-207ENST00000560288 NARFQ9UHQ1 456 aa21.3■■□□□ 1
SPPL2A-207ENST00000560288 UBR2Q8IWV8 1755 aa21.3■■□□□ 1
SPPL2A-207ENST00000560288 CICQ96RK0 1608 aaPredicted RBP21.29■■□□□ 1
SPPL2A-207ENST00000560288 PIP4K2AP48426 406 aaPredicted RBP21.29■■□□□ 1
SPPL2A-207ENST00000560288 PDIA6Q15084 440 aa21.29■■□□□ 1
SPPL2A-207ENST00000560288 TSPYL6Q8N831 410 aa21.29■■□□□ 1
SPPL2A-207ENST00000560288 ZNF330Q9Y3S2 320 aaPredicted RBP21.29■■□□□ 1
SPPL2A-207ENST00000560288 COL24A1Q17RW2 1714 aa21.29■■□□□ 1
SPPL2A-207ENST00000560288 COL15A1P39059 1388 aa21.28■■□□□ 1
SPPL2A-207ENST00000560288 NECTIN2Q92692 538 aa21.28■■□□□ 1
SPPL2A-207ENST00000560288 DDX21Q9NR30 783 aaKnown RBP eCLIP21.28■■□□□ 1
SPPL2A-207ENST00000560288 USP42Q9H9J4 1324 aaKnown RBP21.28■■□□□ 1
SPPL2A-207ENST00000560288 GYS1P13807 737 aa21.27■■□□□ 1
SPPL2A-207ENST00000560288 POLD1P28340 1107 aa21.27■■□□□ 1
SPPL2A-207ENST00000560288 EXOSC9Q06265 439 aaKnown RBP21.27■■□□□ 1
SPPL2A-207ENST00000560288 TWISTNBQ3B726 338 aaPredicted RBP21.27■■□□□ 1
SPPL2A-207ENST00000560288 DBF4Q9UBU7 674 aaPredicted RBP21.27■■□□□ 1
SPPL2A-207ENST00000560288 SRP68Q9UHB9 627 aaKnown RBP21.27■■□□□ 1
SPPL2A-207ENST00000560288 TBC1D2BQ9UPU7 963 aa21.27■■□□□ 1
SPPL2A-207ENST00000560288 TJP1Q07157 1748 aa21.26■□□□□ 0.99
SPPL2A-207ENST00000560288 MYL6BP14649 208 aa21.26■□□□□ 0.99
SPPL2A-207ENST00000560288 CCDC30Q5VVM6 783 aa21.26■□□□□ 0.99
SPPL2A-207ENST00000560288 USPL1Q5W0Q7 1092 aa21.26■□□□□ 0.99
SPPL2A-207ENST00000560288 DZIP3Q86Y13 1208 aaKnown RBP21.26■□□□□ 0.99
SPPL2A-207ENST00000560288 TRMT2AQ8IZ69 625 aaKnown RBP21.26■□□□□ 0.99
SPPL2A-207ENST00000560288 CDCA7LQ96GN5 454 aa21.26■□□□□ 0.99
SPPL2A-207ENST00000560288 KDM3BQ7LBC6 1761 aa21.25■□□□□ 0.99
SPPL2A-207ENST00000560288 GOLGB1Q14789 3259 aaKnown RBP21.25■□□□□ 0.99
SPPL2A-207ENST00000560288 VAMP4O75379 141 aa21.25■□□□□ 0.99
SPPL2A-207ENST00000560288 GPR162Q16538 588 aa21.25■□□□□ 0.99
SPPL2A-207ENST00000560288 NLGN2Q8NFZ4 835 aa21.25■□□□□ 0.99
SPPL2A-207ENST00000560288 RGL2O15211 777 aa21.24■□□□□ 0.99
SPPL2A-207ENST00000560288 MSL1Q68DK7 614 aa21.24■□□□□ 0.99
SPPL2A-207ENST00000560288 LRP10Q7Z4F1 713 aa21.24■□□□□ 0.99
SPPL2A-207ENST00000560288 CHD4Q14839 1912 aa21.23■□□□□ 0.99
SPPL2A-207ENST00000560288 VIRMAQ69YN4 1812 aaKnown RBP21.23■□□□□ 0.99
SPPL2A-207ENST00000560288 TAF1LQ8IZX4 1826 aa21.23■□□□□ 0.99
SPPL2A-207ENST00000560288 CAMTA2O94983 1202 aa21.23■□□□□ 0.99
SPPL2A-207ENST00000560288 FKBP8Q14318 412 aa21.23■□□□□ 0.99
SPPL2A-207ENST00000560288 BCL2L12Q9HB09 334 aa21.23■□□□□ 0.99
SPPL2A-207ENST00000560288 HYPKQ9NX55 129 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms