RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 CANXP27824 592 aaKnown RBP15.43■□□□□ 0.06
RABGGTA-216ENST00000560243 FKBP8Q14318 412 aa15.43■□□□□ 0.06
RABGGTA-216ENST00000560243 CCDC146Q8IYE0 955 aa15.43■□□□□ 0.06
RABGGTA-216ENST00000560243 NLGN1Q8N2Q7 840 aa15.43■□□□□ 0.06
RABGGTA-216ENST00000560243 FMNL2Q96PY5 1086 aa15.43■□□□□ 0.06
RABGGTA-216ENST00000560243 STARD3NLO95772 234 aa15.42■□□□□ 0.06
RABGGTA-216ENST00000560243 CD2APQ9Y5K6 639 aa15.42■□□□□ 0.06
RABGGTA-216ENST00000560243 COL15A1P39059 1388 aa15.41■□□□□ 0.06
RABGGTA-216ENST00000560243 A1BGP04217 495 aa15.41■□□□□ 0.06
RABGGTA-216ENST00000560243 TAF7Q15545 349 aaPredicted RBP15.41■□□□□ 0.06
RABGGTA-216ENST00000560243 PELP1Q8IZL8 1130 aaKnown RBP15.41■□□□□ 0.06
RABGGTA-216ENST00000560243 PNNQ9H307 717 aaKnown RBP15.41■□□□□ 0.06
RABGGTA-216ENST00000560243 ADAMTS8Q9UP79 889 aa15.41■□□□□ 0.06
RABGGTA-216ENST00000560243 GPR162Q16538 588 aa15.4■□□□□ 0.06
RABGGTA-216ENST00000560243 USPL1Q5W0Q7 1092 aa15.4■□□□□ 0.06
RABGGTA-216ENST00000560243 RRP7AQ9Y3A4 280 aaKnown RBP15.4■□□□□ 0.06
RABGGTA-216ENST00000560243 USP16Q9Y5T5 823 aa15.4■□□□□ 0.06
RABGGTA-216ENST00000560243 KDM3BQ7LBC6 1761 aa15.39■□□□□ 0.05
RABGGTA-216ENST00000560243 YBX3P16989 372 aaKnown RBP eCLIP15.39■□□□□ 0.05
RABGGTA-216ENST00000560243 TMPOP42166 694 aaKnown RBP15.39■□□□□ 0.05
RABGGTA-216ENST00000560243 PIP4K2AP48426 406 aaPredicted RBP15.39■□□□□ 0.05
RABGGTA-216ENST00000560243 EIF5P55010 431 aaKnown RBP15.39■□□□□ 0.05
RABGGTA-216ENST00000560243 RIPK4P57078 832 aa15.39■□□□□ 0.05
RABGGTA-216ENST00000560243 DDR1Q08345 913 aa15.39■□□□□ 0.05
RABGGTA-216ENST00000560243 WDR43Q15061 677 aaKnown RBP eCLIP15.39■□□□□ 0.05
RABGGTA-216ENST00000560243 CCDC184Q52MB2 194 aa15.39■□□□□ 0.05
RABGGTA-216ENST00000560243 TEX13AQ9BXU3 409 aaPredicted RBP15.39■□□□□ 0.05
RABGGTA-216ENST00000560243 BCL2L12Q9HB09 334 aa15.39■□□□□ 0.05
RABGGTA-216ENST00000560243 WWC3Q9ULE0 1092 aa15.39■□□□□ 0.05
RABGGTA-216ENST00000560243 KIF13BQ9NQT8 1826 aa15.38■□□□□ 0.05
RABGGTA-216ENST00000560243 ZPR1O75312 459 aa15.38■□□□□ 0.05
RABGGTA-216ENST00000560243 NARFQ9UHQ1 456 aa15.38■□□□□ 0.05
RABGGTA-216ENST00000560243 KIAA1551Q9HCM1 1747 aa15.37■□□□□ 0.05
RABGGTA-216ENST00000560243 SNRPA1P09661 255 aaKnown RBP15.37■□□□□ 0.05
RABGGTA-216ENST00000560243 YY1P25490 414 aa15.37■□□□□ 0.05
RABGGTA-216ENST00000560243 TM4SF1P30408 202 aa15.37■□□□□ 0.05
RABGGTA-216ENST00000560243 NEUROD2Q15784 382 aa15.37■□□□□ 0.05
RABGGTA-216ENST00000560243 ZNF330Q9Y3S2 320 aaPredicted RBP15.37■□□□□ 0.05
RABGGTA-216ENST00000560243 PARP3Q9Y6F1 533 aa15.37■□□□□ 0.05
RABGGTA-216ENST00000560243 C10orf71Q711Q0 1435 aa15.36■□□□□ 0.05
RABGGTA-216ENST00000560243 RUNDC1Q96C34 613 aa15.36■□□□□ 0.05
RABGGTA-216ENST00000560243 TBC1D2BQ9UPU7 963 aa15.36■□□□□ 0.05
RABGGTA-216ENST00000560243 N4BP2Q86UW6 1770 aaPredicted RBP15.36■□□□□ 0.05
RABGGTA-216ENST00000560243 PXDNLA1KZ92 1463 aa15.35■□□□□ 0.05
RABGGTA-216ENST00000560243 POLRMTO00411 1230 aaKnown RBP15.35■□□□□ 0.05
RABGGTA-216ENST00000560243 IL6STP40189 918 aaPredicted RBP15.35■□□□□ 0.05
RABGGTA-216ENST00000560243 NFIXQ14938 502 aa15.35■□□□□ 0.05
RABGGTA-216ENST00000560243 CHD4Q14839 1912 aa15.35■□□□□ 0.05
RABGGTA-216ENST00000560243 AFDNP55196 1824 aaKnown RBP15.34■□□□□ 0.05
RABGGTA-216ENST00000560243 NBPF26B4DH59 902 aa15.34■□□□□ 0.05
RABGGTA-216ENST00000560243 EIF4A1P60842 406 aaKnown RBP15.34■□□□□ 0.05
RABGGTA-216ENST00000560243 NBPF10Q6P3W6 841 aaKnown RBP15.34■□□□□ 0.05
RABGGTA-216ENST00000560243 NBPF15Q8N660 670 aa15.34■□□□□ 0.05
RABGGTA-216ENST00000560243 PNISRQ8TF01 805 aaKnown RBP15.34■□□□□ 0.05
RABGGTA-216ENST00000560243 TRIM35Q9UPQ4 493 aa15.34■□□□□ 0.05
RABGGTA-216ENST00000560243 SCN7AQ01118 1682 aa15.34■□□□□ 0.05
RABGGTA-216ENST00000560243 A0A087WZG4 1122 aa15.33■□□□□ 0.04
RABGGTA-216ENST00000560243 A0A0G2JLW4 131 aa15.33■□□□□ 0.04
RABGGTA-216ENST00000560243 LAMB4A4D0S4 1761 aa15.33■□□□□ 0.04
RABGGTA-216ENST00000560243 GIGYF1O75420 1035 aaPredicted RBP15.32■□□□□ 0.04
RABGGTA-216ENST00000560243 DPEP1P16444 411 aa15.32■□□□□ 0.04
RABGGTA-216ENST00000560243 BICDL1Q6ZP65 573 aa15.32■□□□□ 0.04
RABGGTA-216ENST00000560243 TSPYL4Q9UJ04 414 aa15.32■□□□□ 0.04
RABGGTA-216ENST00000560243 CAMTA2O94983 1202 aa15.31■□□□□ 0.04
RABGGTA-216ENST00000560243 LMOD3Q0VAK6 560 aa15.31■□□□□ 0.04
RABGGTA-216ENST00000560243 TBC1D9BQ66K14 1250 aa15.31■□□□□ 0.04
RABGGTA-216ENST00000560243 APAF1O14727 1248 aa15.3■□□□□ 0.04
RABGGTA-216ENST00000560243 TGFB2P61812 414 aa15.3■□□□□ 0.04
RABGGTA-216ENST00000560243 BCORQ6W2J9 1755 aa15.3■□□□□ 0.04
RABGGTA-216ENST00000560243 DZIP3Q86Y13 1208 aaKnown RBP15.3■□□□□ 0.04
RABGGTA-216ENST00000560243 NRXN2Q9P2S2 1712 aa15.3■□□□□ 0.04
RABGGTA-216ENST00000560243 BRCA1P38398 1863 aaKnown RBP15.29■□□□□ 0.04
RABGGTA-216ENST00000560243 GRIN3BO60391 1043 aa15.29■□□□□ 0.04
RABGGTA-216ENST00000560243 SERPINB2P05120 415 aa15.29■□□□□ 0.04
RABGGTA-216ENST00000560243 KCNA3P22001 575 aa15.29■□□□□ 0.04
RABGGTA-216ENST00000560243 CHRNA5P30532 468 aa15.29■□□□□ 0.04
RABGGTA-216ENST00000560243 CARMIL3Q8ND23 1372 aa15.28■□□□□ 0.04
RABGGTA-216ENST00000560243 SENP3-EIF4A1A0A087X0R7 540 aa15.28■□□□□ 0.04
RABGGTA-216ENST00000560243 ANP32CO43423 234 aa15.28■□□□□ 0.04
RABGGTA-216ENST00000560243 KRT24Q2M2I5 525 aa15.28■□□□□ 0.04
RABGGTA-216ENST00000560243 NPM2Q86SE8 214 aaKnown RBP15.28■□□□□ 0.04
RABGGTA-216ENST00000560243 CHL1O00533 1208 aa15.27■□□□□ 0.04
RABGGTA-216ENST00000560243 CCDC24Q8N4L8 307 aa15.27■□□□□ 0.04
RABGGTA-216ENST00000560243 NGEFQ8N5V2 710 aa15.27■□□□□ 0.04
RABGGTA-216ENST00000560243 LAS1LQ9Y4W2 734 aaKnown RBP15.27■□□□□ 0.04
RABGGTA-216ENST00000560243 MRS2Q9HD23 443 aa15.26■□□□□ 0.03
RABGGTA-216ENST00000560243 BABAM1Q9NWV8 329 aa15.26■□□□□ 0.03
RABGGTA-216ENST00000560243 BCS1LQ9Y276 419 aa15.26■□□□□ 0.03
RABGGTA-216ENST00000560243 ANKRD31Q8N7Z5 1873 aa15.26■□□□□ 0.03
RABGGTA-216ENST00000560243 MYL6BP14649 208 aa15.25■□□□□ 0.03
RABGGTA-216ENST00000560243 HLFQ16534 295 aa15.25■□□□□ 0.03
RABGGTA-216ENST00000560243 EIF2S2P20042 333 aaKnown RBP15.24■□□□□ 0.03
RABGGTA-216ENST00000560243 PRR5LQ6MZQ0 368 aa15.24■□□□□ 0.03
RABGGTA-216ENST00000560243 TTLL7Q6ZT98 887 aa15.24■□□□□ 0.03
RABGGTA-216ENST00000560243 ZNF784Q8NCA9 323 aaPredicted RBP15.24■□□□□ 0.03
RABGGTA-216ENST00000560243 SETDB2Q96T68 719 aa15.24■□□□□ 0.03
RABGGTA-216ENST00000560243 ANXA1P04083 346 aa15.23■□□□□ 0.03
RABGGTA-216ENST00000560243 PDIA6Q15084 440 aa15.23■□□□□ 0.03
RABGGTA-216ENST00000560243 PROSER3Q2NL68 480 aa15.23■□□□□ 0.03
RABGGTA-216ENST00000560243 NECTIN2Q92692 538 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms