RNA–Protein interactions for RNA: ENST00000559289.1

SHC4-206, Transcript of SHC adaptor protein 4, humanhuman

TSL 3

Gene SHC4, Length 864 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-206ENST00000559289 EN1Q05925 392 aaPredicted RBP7.73□□□□□ -1.17
SHC4-206ENST00000559289 ITPK1Q13572 414 aa7.73□□□□□ -1.17
SHC4-206ENST00000559289 EZH2Q15910 746 aaKnown RBP7.73□□□□□ -1.17
SHC4-206ENST00000559289 TSPYL6Q8N831 410 aa7.73□□□□□ -1.17
SHC4-206ENST00000559289 SMARCC1Q92922 1105 aaPredicted RBP7.73□□□□□ -1.17
SHC4-206ENST00000559289 C4BP0C0L5 1744 aa7.72□□□□□ -1.17
SHC4-206ENST00000559289 GIGYF1O75420 1035 aaPredicted RBP7.72□□□□□ -1.17
SHC4-206ENST00000559289 TXNRD1Q16881 649 aa7.72□□□□□ -1.17
SHC4-206ENST00000559289 CCDC125Q86Z20 511 aa7.72□□□□□ -1.17
SHC4-206ENST00000559289 TTC5Q8N0Z6 440 aa7.72□□□□□ -1.17
SHC4-206ENST00000559289 VSIG10Q8N0Z9 540 aa7.72□□□□□ -1.17
SHC4-206ENST00000559289 C8orf58Q8NAV2 365 aa7.72□□□□□ -1.17
SHC4-206ENST00000559289 FMNL2Q96PY5 1086 aa7.72□□□□□ -1.17
SHC4-206ENST00000559289 USP16Q9Y5T5 823 aa7.72□□□□□ -1.17
SHC4-206ENST00000559289 UBR3Q6ZT12 1888 aa7.72□□□□□ -1.17
SHC4-206ENST00000559289 NPM3O75607 178 aaKnown RBP7.71□□□□□ -1.18
SHC4-206ENST00000559289 BAG6P46379 1132 aa7.71□□□□□ -1.18
SHC4-206ENST00000559289 EXOSC9Q06265 439 aaKnown RBP7.71□□□□□ -1.18
SHC4-206ENST00000559289 DNAJC10Q8IXB1 793 aa7.71□□□□□ -1.18
SHC4-206ENST00000559289 PIP4P2Q8N4L2 257 aa7.71□□□□□ -1.18
SHC4-206ENST00000559289 LINC00116Q8NCU8 138 aa7.71□□□□□ -1.18
SHC4-206ENST00000559289 CCNL1Q9UK58 526 aaPredicted RBP7.71□□□□□ -1.18
SHC4-206ENST00000559289 QSER1Q2KHR3 1735 aa7.7□□□□□ -1.18
SHC4-206ENST00000559289 VAMP4O75379 141 aa7.7□□□□□ -1.18
SHC4-206ENST00000559289 SNRPA1P09661 255 aaKnown RBP7.7□□□□□ -1.18
SHC4-206ENST00000559289 CYP19A1P11511 503 aaPredicted RBP7.7□□□□□ -1.18
SHC4-206ENST00000559289 ATP6V1AP38606 617 aa7.7□□□□□ -1.18
SHC4-206ENST00000559289 SF3B2Q13435 895 aaKnown RBP7.7□□□□□ -1.18
SHC4-206ENST00000559289 SLC27A3Q5K4L6 730 aa7.7□□□□□ -1.18
SHC4-206ENST00000559289 ARXQ96QS3 562 aa7.7□□□□□ -1.18
SHC4-206ENST00000559289 MYH16Q9H6N6 1097 aa7.7□□□□□ -1.18
SHC4-206ENST00000559289 C4AP0C0L4 1744 aa7.69□□□□□ -1.18
SHC4-206ENST00000559289 ELL2O00472 640 aaPredicted RBP7.69□□□□□ -1.18
SHC4-206ENST00000559289 HOXB7P09629 217 aa7.69□□□□□ -1.18
SHC4-206ENST00000559289 INTS5Q6P9B9 1019 aaKnown RBP7.69□□□□□ -1.18
SHC4-206ENST00000559289 LRP10Q7Z4F1 713 aa7.69□□□□□ -1.18
SHC4-206ENST00000559289 AMIGO3Q86WK7 504 aa7.69□□□□□ -1.18
SHC4-206ENST00000559289 ANO8Q9HCE9 1232 aaPredicted RBP7.69□□□□□ -1.18
SHC4-206ENST00000559289 CACNA1FO60840 1977 aa7.68□□□□□ -1.18
SHC4-206ENST00000559289 NBPF26B4DH59 902 aa7.68□□□□□ -1.18
SHC4-206ENST00000559289 A1BGP04217 495 aa7.68□□□□□ -1.18
SHC4-206ENST00000559289 CRKLP46109 303 aaKnown RBP7.68□□□□□ -1.18
SHC4-206ENST00000559289 PIP4K2AP48426 406 aaPredicted RBP7.68□□□□□ -1.18
SHC4-206ENST00000559289 PDIA6Q15084 440 aa7.68□□□□□ -1.18
SHC4-206ENST00000559289 ZNF827Q17R98 1081 aa7.68□□□□□ -1.18
SHC4-206ENST00000559289 PROSER3Q2NL68 480 aa7.68□□□□□ -1.18
SHC4-206ENST00000559289 TWISTNBQ3B726 338 aaPredicted RBP7.68□□□□□ -1.18
SHC4-206ENST00000559289 RC3H1Q5TC82 1133 aaKnown RBP7.68□□□□□ -1.18
SHC4-206ENST00000559289 NBPF14Q5TI25 921 aa7.68□□□□□ -1.18
SHC4-206ENST00000559289 LHX8Q68G74 356 aa7.68□□□□□ -1.18
SHC4-206ENST00000559289 NBPF10Q6P3W6 841 aaKnown RBP7.68□□□□□ -1.18
SHC4-206ENST00000559289 SMIM5Q71RC9 77 aa7.68□□□□□ -1.18
SHC4-206ENST00000559289 NBPF15Q8N660 670 aa7.68□□□□□ -1.18
SHC4-206ENST00000559289 NECTIN2Q92692 538 aa7.68□□□□□ -1.18
SHC4-206ENST00000559289 AKT1S1Q96B36 256 aa7.68□□□□□ -1.18
SHC4-206ENST00000559289 ZBTB1Q9Y2K1 713 aa7.68□□□□□ -1.18
SHC4-206ENST00000559289 CNTNAP4Q9C0A0 1308 aa7.68□□□□□ -1.18
SHC4-206ENST00000559289 BCORQ6W2J9 1755 aa7.67□□□□□ -1.18
SHC4-206ENST00000559289 SOCS7O14512 581 aa7.67□□□□□ -1.18
SHC4-206ENST00000559289 EIF2S2P20042 333 aaKnown RBP7.67□□□□□ -1.18
SHC4-206ENST00000559289 TEX13AQ9BXU3 409 aaPredicted RBP7.67□□□□□ -1.18
SHC4-206ENST00000559289 SOS1Q07889 1333 aaPredicted RBP7.67□□□□□ -1.18
SHC4-206ENST00000559289 CASZ1Q86V15 1759 aa7.66□□□□□ -1.18
SHC4-206ENST00000559289 TCERG1O14776 1098 aaKnown RBP7.66□□□□□ -1.18
SHC4-206ENST00000559289 STARD3NLO95772 234 aa7.66□□□□□ -1.18
SHC4-206ENST00000559289 ANXA1P04083 346 aa7.66□□□□□ -1.18
SHC4-206ENST00000559289 HDGFL1Q5TGJ6 251 aa7.66□□□□□ -1.18
SHC4-206ENST00000559289 CCDC87Q9NVE4 849 aa7.66□□□□□ -1.18
SHC4-206ENST00000559289 CHPF2Q9P2E5 772 aa7.66□□□□□ -1.18
SHC4-206ENST00000559289 SCN7AQ01118 1682 aa7.66□□□□□ -1.18
SHC4-206ENST00000559289 GNPATO15228 680 aa7.65□□□□□ -1.18
SHC4-206ENST00000559289 RPS6KA4O75676 772 aa7.65□□□□□ -1.18
SHC4-206ENST00000559289 CT47B1P0C2W7 299 aaPredicted RBP7.65□□□□□ -1.18
SHC4-206ENST00000559289 CANXP27824 592 aaKnown RBP7.65□□□□□ -1.18
SHC4-206ENST00000559289 RARSP54136 660 aaKnown RBP7.65□□□□□ -1.18
SHC4-206ENST00000559289 EIF5P55010 431 aaKnown RBP7.65□□□□□ -1.18
SHC4-206ENST00000559289 ERBB4Q15303 1308 aa7.65□□□□□ -1.18
SHC4-206ENST00000559289 SLC15A2Q16348 729 aa7.65□□□□□ -1.18
SHC4-206ENST00000559289 G2E3Q7L622 706 aa7.65□□□□□ -1.18
SHC4-206ENST00000559289 SSH1Q8WYL5 1049 aa7.65□□□□□ -1.18
SHC4-206ENST00000559289 DDX21Q9NR30 783 aaKnown RBP eCLIP7.65□□□□□ -1.18
SHC4-206ENST00000559289 NUP98P52948 1817 aa7.64□□□□□ -1.19
SHC4-206ENST00000559289 ARFGEF2Q9Y6D5 1785 aa7.64□□□□□ -1.19
SHC4-206ENST00000559289 COL24A1Q17RW2 1714 aa7.64□□□□□ -1.19
SHC4-206ENST00000559289 COL15A1P39059 1388 aa7.64□□□□□ -1.19
SHC4-206ENST00000559289 PNPLA7Q6ZV29 1317 aa7.64□□□□□ -1.19
SHC4-206ENST00000559289 MYL6BP14649 208 aa7.64□□□□□ -1.19
SHC4-206ENST00000559289 IL6STP40189 918 aaPredicted RBP7.64□□□□□ -1.19
SHC4-206ENST00000559289 CCDC30Q5VVM6 783 aa7.64□□□□□ -1.19
SHC4-206ENST00000559289 MRPL50Q8N5N7 158 aaKnown RBP7.64□□□□□ -1.19
SHC4-206ENST00000559289 AK7Q96M32 723 aa7.64□□□□□ -1.19
SHC4-206ENST00000559289 PDGFDQ9GZP0 370 aaPredicted RBP7.64□□□□□ -1.19
SHC4-206ENST00000559289 PHAXQ9H814 394 aaKnown RBP7.64□□□□□ -1.19
SHC4-206ENST00000559289 DBF4Q9UBU7 674 aaPredicted RBP7.64□□□□□ -1.19
SHC4-206ENST00000559289 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.63□□□□□ -1.19
SHC4-206ENST00000559289 BCAR3O75815 825 aa7.63□□□□□ -1.19
SHC4-206ENST00000559289 SSFA2P28290 1259 aa7.63□□□□□ -1.19
SHC4-206ENST00000559289 BRPF1P55201 1214 aaPredicted RBP7.63□□□□□ -1.19
SHC4-206ENST00000559289 ALDH1L2Q3SY69 923 aa7.63□□□□□ -1.19
SHC4-206ENST00000559289 TTLL7Q6ZT98 887 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms