RNA–Protein interactions for RNA: ENST00000559177.5

TRPM1-209, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 5

Gene TRPM1, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-209ENST00000559177 CNKSR2Q8WXI2 1034 aa13.54□□□□□ -0.24
TRPM1-209ENST00000559177 CNTNAP4Q9C0A0 1308 aa13.54□□□□□ -0.24
TRPM1-209ENST00000559177 SENP3-EIF4A1A0A087X0R7 540 aa13.53□□□□□ -0.24
TRPM1-209ENST00000559177 DCAF8L1A6NGE4 600 aa13.53□□□□□ -0.24
TRPM1-209ENST00000559177 CYP19A1P11511 503 aaPredicted RBP13.53□□□□□ -0.24
TRPM1-209ENST00000559177 SSFA2P28290 1259 aa13.53□□□□□ -0.24
TRPM1-209ENST00000559177 MSL1Q68DK7 614 aa13.53□□□□□ -0.24
TRPM1-209ENST00000559177 INTS5Q6P9B9 1019 aaKnown RBP13.53□□□□□ -0.24
TRPM1-209ENST00000559177 VSIG10Q8N0Z9 540 aa13.53□□□□□ -0.24
TRPM1-209ENST00000559177 FLAD1Q8NFF5 587 aa13.53□□□□□ -0.24
TRPM1-209ENST00000559177 SLC16A10Q8TF71 515 aa13.53□□□□□ -0.24
TRPM1-209ENST00000559177 FMNL2Q96PY5 1086 aa13.53□□□□□ -0.24
TRPM1-209ENST00000559177 PPP1R1BQ9UD71 204 aaPredicted RBP13.53□□□□□ -0.24
TRPM1-209ENST00000559177 RTCBQ9Y3I0 505 aaKnown RBP13.53□□□□□ -0.24
TRPM1-209ENST00000559177 APAF1O14727 1248 aa13.53□□□□□ -0.24
TRPM1-209ENST00000559177 RPS6KA4O75676 772 aa13.53□□□□□ -0.24
TRPM1-209ENST00000559177 HEG1Q9ULI3 1381 aa13.53□□□□□ -0.24
TRPM1-209ENST00000559177 MYH14Q7Z406 1995 aaKnown RBP13.52□□□□□ -0.24
TRPM1-209ENST00000559177 CICQ96RK0 1608 aaPredicted RBP13.52□□□□□ -0.25
TRPM1-209ENST00000559177 LMOD3Q0VAK6 560 aa13.52□□□□□ -0.25
TRPM1-209ENST00000559177 TRAPPC3LQ5T215 181 aa13.52□□□□□ -0.25
TRPM1-209ENST00000559177 SGIP1Q9BQI5 828 aa13.52□□□□□ -0.25
TRPM1-209ENST00000559177 TRIM35Q9UPQ4 493 aa13.52□□□□□ -0.25
TRPM1-209ENST00000559177 PRAMEF22A3QJZ6 481 aa13.51□□□□□ -0.25
TRPM1-209ENST00000559177 NGEFQ8N5V2 710 aa13.51□□□□□ -0.25
TRPM1-209ENST00000559177 ARHGEF1Q92888 912 aaKnown RBP13.51□□□□□ -0.25
TRPM1-209ENST00000559177 CCDC87Q9NVE4 849 aa13.51□□□□□ -0.25
TRPM1-209ENST00000559177 RCAN3Q9UKA8 241 aa13.5□□□□□ -0.25
TRPM1-209ENST00000559177 ZBTB1Q9Y2K1 713 aa13.5□□□□□ -0.25
TRPM1-209ENST00000559177 STARD3NLO95772 234 aa13.5□□□□□ -0.25
TRPM1-209ENST00000559177 CANXP27824 592 aaKnown RBP13.5□□□□□ -0.25
TRPM1-209ENST00000559177 USP16Q9Y5T5 823 aa13.5□□□□□ -0.25
TRPM1-209ENST00000559177 POLD1P28340 1107 aa13.49□□□□□ -0.25
TRPM1-209ENST00000559177 RFC4P35249 363 aa13.49□□□□□ -0.25
TRPM1-209ENST00000559177 RRP1P56182 461 aaKnown RBP13.49□□□□□ -0.25
TRPM1-209ENST00000559177 ARXQ96QS3 562 aa13.49□□□□□ -0.25
TRPM1-209ENST00000559177 TEX13AQ9BXU3 409 aaPredicted RBP13.49□□□□□ -0.25
TRPM1-209ENST00000559177 TSPYL4Q9UJ04 414 aa13.49□□□□□ -0.25
TRPM1-209ENST00000559177 LAS1LQ9Y4W2 734 aaKnown RBP13.49□□□□□ -0.25
TRPM1-209ENST00000559177 A1BGP04217 495 aa13.48□□□□□ -0.25
TRPM1-209ENST00000559177 SNRPA1P09661 255 aaKnown RBP13.48□□□□□ -0.25
TRPM1-209ENST00000559177 SRP68Q9UHB9 627 aaKnown RBP13.48□□□□□ -0.25
TRPM1-209ENST00000559177 KDM3BQ7LBC6 1761 aa13.48□□□□□ -0.25
TRPM1-209ENST00000559177 PIP4K2AP48426 406 aaPredicted RBP13.47□□□□□ -0.25
TRPM1-209ENST00000559177 EIF4A1P60842 406 aaKnown RBP13.47□□□□□ -0.25
TRPM1-209ENST00000559177 RBM19Q9Y4C8 960 aaKnown RBP13.47□□□□□ -0.25
TRPM1-209ENST00000559177 SOS1Q07889 1333 aaPredicted RBP13.47□□□□□ -0.25
TRPM1-209ENST00000559177 B4GALNT3Q6L9W6 998 aa13.46□□□□□ -0.25
TRPM1-209ENST00000559177 ZNF330Q9Y3S2 320 aaPredicted RBP13.46□□□□□ -0.25
TRPM1-209ENST00000559177 COL24A1Q17RW2 1714 aa13.46□□□□□ -0.25
TRPM1-209ENST00000559177 GYS1P13807 737 aa13.46□□□□□ -0.26
TRPM1-209ENST00000559177 KLHL34Q8N239 644 aa13.46□□□□□ -0.26
TRPM1-209ENST00000559177 CCDC136Q96JN2 1154 aa13.46□□□□□ -0.26
TRPM1-209ENST00000559177 FHDC1Q9C0D6 1143 aaPredicted RBP13.46□□□□□ -0.26
TRPM1-209ENST00000559177 C4AP0C0L4 1744 aa13.45□□□□□ -0.26
TRPM1-209ENST00000559177 GIGYF1O75420 1035 aaPredicted RBP13.45□□□□□ -0.26
TRPM1-209ENST00000559177 SALL2Q9Y467 1007 aaPredicted RBP13.45□□□□□ -0.26
TRPM1-209ENST00000559177 USP42Q9H9J4 1324 aaKnown RBP13.45□□□□□ -0.26
TRPM1-209ENST00000559177 COL15A1P39059 1388 aa13.45□□□□□ -0.26
TRPM1-209ENST00000559177 CHL1O00533 1208 aa13.44□□□□□ -0.26
TRPM1-209ENST00000559177 EIF5P55010 431 aaKnown RBP13.44□□□□□ -0.26
TRPM1-209ENST00000559177 USPL1Q5W0Q7 1092 aa13.44□□□□□ -0.26
TRPM1-209ENST00000559177 RNF216Q9NWF9 866 aaPredicted RBP13.44□□□□□ -0.26
TRPM1-209ENST00000559177 ZNF521Q96K83 1311 aa13.44□□□□□ -0.26
TRPM1-209ENST00000559177 ZPR1O75312 459 aa13.43□□□□□ -0.26
TRPM1-209ENST00000559177 MMP10P09238 476 aa13.43□□□□□ -0.26
TRPM1-209ENST00000559177 NLGN1Q8N2Q7 840 aa13.43□□□□□ -0.26
TRPM1-209ENST00000559177 BABAM1Q9NWV8 329 aa13.43□□□□□ -0.26
TRPM1-209ENST00000559177 NBPF26B4DH59 902 aa13.42□□□□□ -0.26
TRPM1-209ENST00000559177 IL6STP40189 918 aaPredicted RBP13.42□□□□□ -0.26
TRPM1-209ENST00000559177 CACNB1Q02641 598 aaPredicted RBP13.42□□□□□ -0.26
TRPM1-209ENST00000559177 KRT24Q2M2I5 525 aa13.42□□□□□ -0.26
TRPM1-209ENST00000559177 NBPF10Q6P3W6 841 aaKnown RBP13.42□□□□□ -0.26
TRPM1-209ENST00000559177 NBPF15Q8N660 670 aa13.42□□□□□ -0.26
TRPM1-209ENST00000559177 SYT17Q9BSW7 474 aa13.42□□□□□ -0.26
TRPM1-209ENST00000559177 TBC1D2BQ9UPU7 963 aa13.42□□□□□ -0.26
TRPM1-209ENST00000559177 CDCA7LQ96GN5 454 aa13.42□□□□□ -0.26
TRPM1-209ENST00000559177 CFAP44Q96MT7 982 aa13.42□□□□□ -0.26
TRPM1-209ENST00000559177 NARFQ9UHQ1 456 aa13.42□□□□□ -0.26
TRPM1-209ENST00000559177 EIF2S2P20042 333 aaKnown RBP13.41□□□□□ -0.26
TRPM1-209ENST00000559177 GOLGA2Q08379 1002 aa13.41□□□□□ -0.26
TRPM1-209ENST00000559177 WWC1Q8IX03 1113 aa13.41□□□□□ -0.26
TRPM1-209ENST00000559177 BCL2L12Q9HB09 334 aa13.41□□□□□ -0.26
TRPM1-209ENST00000559177 MBIPQ9NS73 344 aa13.41□□□□□ -0.26
TRPM1-209ENST00000559177 A0A087WZG4 1122 aa13.4□□□□□ -0.26
TRPM1-209ENST00000559177 ZNF853P0CG23 659 aa13.4□□□□□ -0.26
TRPM1-209ENST00000559177 CALD1Q05682 793 aaKnown RBP13.4□□□□□ -0.26
TRPM1-209ENST00000559177 NPM2Q86SE8 214 aaKnown RBP13.4□□□□□ -0.26
TRPM1-209ENST00000559177 NECTIN2Q92692 538 aa13.4□□□□□ -0.26
TRPM1-209ENST00000559177 LAMB4A4D0S4 1761 aa13.4□□□□□ -0.26
TRPM1-209ENST00000559177 FANCIQ9NVI1 1328 aa13.39□□□□□ -0.27
TRPM1-209ENST00000559177 GNAI1P63096 354 aa13.39□□□□□ -0.27
TRPM1-209ENST00000559177 CCDC27Q2M243 656 aa13.39□□□□□ -0.27
TRPM1-209ENST00000559177 DZIP3Q86Y13 1208 aaKnown RBP13.39□□□□□ -0.27
TRPM1-209ENST00000559177 NLGN2Q8NFZ4 835 aa13.39□□□□□ -0.27
TRPM1-209ENST00000559177 IFT57Q9NWB7 429 aa13.39□□□□□ -0.27
TRPM1-209ENST00000559177 MYL6BP14649 208 aa13.39□□□□□ -0.27
TRPM1-209ENST00000559177 DDR1Q08345 913 aa13.39□□□□□ -0.27
TRPM1-209ENST00000559177 PARP3Q9Y6F1 533 aa13.39□□□□□ -0.27
TRPM1-209ENST00000559177 TM4SF1P30408 202 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms