RNA–Protein interactions for RNA: ENST00000559099.5

HMG20A-208, Transcript of high mobility group 20A, humanhuman

TSL 5

Gene HMG20A, Length 558 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-208ENST00000559099 MAP1SQ66K74 1059 aaPredicted RBP11.2□□□□□ -0.62
HMG20A-208ENST00000559099 RAPGEF4Q8WZA2 1011 aa11.2□□□□□ -0.62
HMG20A-208ENST00000559099 COL6A3P12111 3177 aa11.2□□□□□ -0.62
HMG20A-208ENST00000559099 SMG6Q86US8 1419 aaKnown RBP11.19□□□□□ -0.62
HMG20A-208ENST00000559099 CNTNAP4Q9C0A0 1308 aa11.19□□□□□ -0.62
HMG20A-208ENST00000559099 CA12O43570 354 aa11.19□□□□□ -0.62
HMG20A-208ENST00000559099 ECE1P42892 770 aa11.19□□□□□ -0.62
HMG20A-208ENST00000559099 EAPPQ56P03 285 aaPredicted RBP11.19□□□□□ -0.62
HMG20A-208ENST00000559099 RC3H1Q5TC82 1133 aaKnown RBP11.19□□□□□ -0.62
HMG20A-208ENST00000559099 CNTROBQ8N137 903 aa11.19□□□□□ -0.62
HMG20A-208ENST00000559099 TTLL6Q8N841 843 aa11.19□□□□□ -0.62
HMG20A-208ENST00000559099 ATG3Q9NT62 314 aa11.19□□□□□ -0.62
HMG20A-208ENST00000559099 USP42Q9H9J4 1324 aaKnown RBP11.18□□□□□ -0.62
HMG20A-208ENST00000559099 RPS6KA4O75676 772 aa11.18□□□□□ -0.62
HMG20A-208ENST00000559099 TATP17735 454 aaPredicted RBP11.18□□□□□ -0.62
HMG20A-208ENST00000559099 NKX1-1Q15270 411 aaPredicted RBP11.18□□□□□ -0.62
HMG20A-208ENST00000559099 PAXIP1Q6ZW49 1069 aaPredicted RBP11.18□□□□□ -0.62
HMG20A-208ENST00000559099 FBLN1P23142 703 aa11.17□□□□□ -0.62
HMG20A-208ENST00000559099 TM4SF1P30408 202 aa11.17□□□□□ -0.62
HMG20A-208ENST00000559099 MAP2K2P36507 400 aa11.17□□□□□ -0.62
HMG20A-208ENST00000559099 FMR1Q06787 632 aaKnown RBP eCLIP11.17□□□□□ -0.62
HMG20A-208ENST00000559099 DDX21Q9NR30 783 aaKnown RBP eCLIP11.17□□□□□ -0.62
HMG20A-208ENST00000559099 NBPF15Q8N660 670 aa11.16□□□□□ -0.62
HMG20A-208ENST00000559099 TMOD3Q9NYL9 352 aa11.16□□□□□ -0.62
HMG20A-208ENST00000559099 CLEC11AQ9Y240 323 aa11.16□□□□□ -0.62
HMG20A-208ENST00000559099 EDC4Q6P2E9 1401 aaKnown RBP11.16□□□□□ -0.62
HMG20A-208ENST00000559099 CARMIL3Q8ND23 1372 aa11.16□□□□□ -0.62
HMG20A-208ENST00000559099 COL11A2P13942 1736 aaPredicted RBP11.15□□□□□ -0.62
HMG20A-208ENST00000559099 LTBP3Q9NS15 1303 aa11.15□□□□□ -0.62
HMG20A-208ENST00000559099 BRPF1P55201 1214 aaPredicted RBP11.15□□□□□ -0.62
HMG20A-208ENST00000559099 RTL1A6NKG5 1358 aa11.15□□□□□ -0.63
HMG20A-208ENST00000559099 TRPM7Q96QT4 1865 aa11.15□□□□□ -0.63
HMG20A-208ENST00000559099 EPHX2P34913 555 aa11.14□□□□□ -0.63
HMG20A-208ENST00000559099 AMPHP49418 695 aa11.14□□□□□ -0.63
HMG20A-208ENST00000559099 CST9Q5W186 159 aa11.14□□□□□ -0.63
HMG20A-208ENST00000559099 HACL1Q9UJ83 578 aa11.14□□□□□ -0.63
HMG20A-208ENST00000559099 BRCA2P51587 3418 aa11.14□□□□□ -0.63
HMG20A-208ENST00000559099 ZNF541Q9H0D2 1346 aa11.13□□□□□ -0.63
HMG20A-208ENST00000559099 ANKRD31Q8N7Z5 1873 aa11.13□□□□□ -0.63
HMG20A-208ENST00000559099 C21orf2O43822 256 aa11.13□□□□□ -0.63
HMG20A-208ENST00000559099 C2CD5Q86YS7 1000 aa11.13□□□□□ -0.63
HMG20A-208ENST00000559099 TAOK3Q9H2K8 898 aa11.13□□□□□ -0.63
HMG20A-208ENST00000559099 TLL2Q9Y6L7 1015 aa11.13□□□□□ -0.63
HMG20A-208ENST00000559099 RANBP2P49792 3224 aaKnown RBP11.12□□□□□ -0.63
HMG20A-208ENST00000559099 INSRP06213 1382 aa11.12□□□□□ -0.63
HMG20A-208ENST00000559099 CIAPIN1Q6FI81 312 aa11.11□□□□□ -0.63
HMG20A-208ENST00000559099 PNMA8AQ86V59 439 aaPredicted RBP11.11□□□□□ -0.63
HMG20A-208ENST00000559099 TJP1Q07157 1748 aa11.11□□□□□ -0.63
HMG20A-208ENST00000559099 A0A1W2PP64 1363 aa11.11□□□□□ -0.63
HMG20A-208ENST00000559099 RNF123Q5XPI4 1314 aa11.1□□□□□ -0.63
HMG20A-208ENST00000559099 NCAPD2Q15021 1401 aa11.1□□□□□ -0.63
HMG20A-208ENST00000559099 H0YIN7 160 aa11.1□□□□□ -0.63
HMG20A-208ENST00000559099 TRAF5O00463 557 aa11.1□□□□□ -0.63
HMG20A-208ENST00000559099 NFIXQ14938 502 aa11.1□□□□□ -0.63
HMG20A-208ENST00000559099 RBM42Q9BTD8 480 aaKnown RBP11.1□□□□□ -0.63
HMG20A-208ENST00000559099 SLX4Q8IY92 1834 aa11.09□□□□□ -0.63
HMG20A-208ENST00000559099 CACNA1SQ13698 1873 aa11.09□□□□□ -0.63
HMG20A-208ENST00000559099 CRKLP46109 303 aaKnown RBP11.09□□□□□ -0.63
HMG20A-208ENST00000559099 ZIC5Q96T25 663 aa11.09□□□□□ -0.63
HMG20A-208ENST00000559099 HTTP42858 3142 aa11.09□□□□□ -0.63
HMG20A-208ENST00000559099 SCN11AQ9UI33 1791 aa11.08□□□□□ -0.64
HMG20A-208ENST00000559099 ARFGEF2Q9Y6D5 1785 aa11.08□□□□□ -0.64
HMG20A-208ENST00000559099 RRS1Q15050 365 aaKnown RBP11.08□□□□□ -0.64
HMG20A-208ENST00000559099 USPL1Q5W0Q7 1092 aa11.08□□□□□ -0.64
HMG20A-208ENST00000559099 SAPCD2Q86UD0 394 aa11.08□□□□□ -0.64
HMG20A-208ENST00000559099 HPS5Q9UPZ3 1129 aa11.08□□□□□ -0.64
HMG20A-208ENST00000559099 CENPFP49454 3210 aa11.08□□□□□ -0.64
HMG20A-208ENST00000559099 UNC80Q8N2C7 3258 aa11.08□□□□□ -0.64
HMG20A-208ENST00000559099 TRIOBPQ9H2D6 2365 aa11.08□□□□□ -0.64
HMG20A-208ENST00000559099 SLC17A8Q8NDX2 589 aa11.07□□□□□ -0.64
HMG20A-208ENST00000559099 SERPINB2P05120 415 aa11.06□□□□□ -0.64
HMG20A-208ENST00000559099 PHKG2P15735 406 aa11.06□□□□□ -0.64
HMG20A-208ENST00000559099 HSP90AB2PQ58FF8 381 aa11.06□□□□□ -0.64
HMG20A-208ENST00000559099 HDGFL2Q7Z4V5 671 aaPredicted RBP11.06□□□□□ -0.64
HMG20A-208ENST00000559099 ZNF622Q969S3 477 aaKnown RBP eCLIP11.06□□□□□ -0.641e-7■□□□□ 10
HMG20A-208ENST00000559099 SLC12A5Q9H2X9 1139 aa11.06□□□□□ -0.64
HMG20A-208ENST00000559099 INTS5Q6P9B9 1019 aaKnown RBP11.05□□□□□ -0.64
HMG20A-208ENST00000559099 COG3Q96JB2 828 aa11.05□□□□□ -0.64
HMG20A-208ENST00000559099 HHIPL1Q96JK4 782 aa11.05□□□□□ -0.64
HMG20A-208ENST00000559099 BCL2L12Q9HB09 334 aa11.05□□□□□ -0.64
HMG20A-208ENST00000559099 SPG7Q9UQ90 795 aa11.05□□□□□ -0.64
HMG20A-208ENST00000559099 BCORQ6W2J9 1755 aa11.05□□□□□ -0.64
HMG20A-208ENST00000559099 CTU1Q7Z7A3 348 aaKnown RBP11.04□□□□□ -0.64
HMG20A-208ENST00000559099 TMC1Q8TDI8 760 aa11.04□□□□□ -0.64
HMG20A-208ENST00000559099 PITPNM2Q9BZ72 1349 aa11.04□□□□□ -0.64
HMG20A-208ENST00000559099 VCANP13611 3396 aa11.03□□□□□ -0.64
HMG20A-208ENST00000559099 ZPR1O75312 459 aa11.03□□□□□ -0.64
HMG20A-208ENST00000559099 SAGE1Q9NXZ1 904 aa11.03□□□□□ -0.64
HMG20A-208ENST00000559099 SOS1Q07889 1333 aaPredicted RBP11.03□□□□□ -0.64
HMG20A-208ENST00000559099 LAMA3Q16787 3333 aa11.02□□□□□ -0.65
HMG20A-208ENST00000559099 PRPF40BQ6NWY9 871 aaKnown RBP11.02□□□□□ -0.65
HMG20A-208ENST00000559099 IFNL2Q8IZJ0 200 aa11.02□□□□□ -0.65
HMG20A-208ENST00000559099 GPC2Q8N158 579 aa11.02□□□□□ -0.65
HMG20A-208ENST00000559099 ZNF277Q9NRM2 450 aaPredicted RBP11.02□□□□□ -0.65
HMG20A-208ENST00000559099 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.02□□□□□ -0.65
HMG20A-208ENST00000559099 CEP290O15078 2479 aa11.02□□□□□ -0.65
HMG20A-208ENST00000559099 FZD9O00144 591 aa11.01□□□□□ -0.65
HMG20A-208ENST00000559099 PTCD1O75127 700 aaKnown RBP11.01□□□□□ -0.65
HMG20A-208ENST00000559099 CELF2O95319 508 aaKnown RBP11.01□□□□□ -0.65
HMG20A-208ENST00000559099 NOGQ13253 232 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms