RNA–Protein interactions for RNA: ENST00000558911.1

LRRC28-212, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-212ENST00000558911 FIGNL1Q6PIW4 674 aa6.1□□□□□ -1.43
LRRC28-212ENST00000558911 NDFIP2Q9NV92 336 aa6.1□□□□□ -1.43
LRRC28-212ENST00000558911 PCDHGC4Q9Y5F7 938 aa6.1□□□□□ -1.43
LRRC28-212ENST00000558911 SCO2A0A1W2PP80 73 aa6.09□□□□□ -1.43
LRRC28-212ENST00000558911 ATXN7O15265 892 aaPredicted RBP6.09□□□□□ -1.43
LRRC28-212ENST00000558911 PCBP4P57723 403 aaKnown RBP6.09□□□□□ -1.43
LRRC28-212ENST00000558911 USP4Q13107 963 aa6.09□□□□□ -1.43
LRRC28-212ENST00000558911 NEUROD2Q15784 382 aa6.09□□□□□ -1.43
LRRC28-212ENST00000558911 PPARGC1BQ86YN6 1023 aaKnown RBP6.09□□□□□ -1.43
LRRC28-212ENST00000558911 MTMR14Q8NCE2 650 aa6.09□□□□□ -1.43
LRRC28-212ENST00000558911 CRISPLD1Q9H336 500 aa6.09□□□□□ -1.43
LRRC28-212ENST00000558911 SNRKQ9NRH2 765 aa6.09□□□□□ -1.43
LRRC28-212ENST00000558911 GPR37L1O60883 481 aa6.08□□□□□ -1.44
LRRC28-212ENST00000558911 ITGB7P26010 798 aa6.08□□□□□ -1.44
LRRC28-212ENST00000558911 GATA4P43694 442 aa6.08□□□□□ -1.44
LRRC28-212ENST00000558911 SLFNL1Q499Z3 407 aa6.08□□□□□ -1.44
LRRC28-212ENST00000558911 PLVAPQ9BX97 442 aa6.08□□□□□ -1.44
LRRC28-212ENST00000558911 GOPCQ9HD26 462 aa6.08□□□□□ -1.44
LRRC28-212ENST00000558911 SERTAD1Q9UHV2 236 aa6.08□□□□□ -1.44
LRRC28-212ENST00000558911 PRR12Q9ULL5 1215 aa6.08□□□□□ -1.44
LRRC28-212ENST00000558911 GJA3Q9Y6H8 435 aa6.08□□□□□ -1.44
LRRC28-212ENST00000558911 A0A1W2PNR3 127 aa6.07□□□□□ -1.44
LRRC28-212ENST00000558911 MAPTP10636 758 aaKnown RBP6.07□□□□□ -1.44
LRRC28-212ENST00000558911 ADH6P28332 368 aa6.07□□□□□ -1.44
LRRC28-212ENST00000558911 FCHSD1Q86WN1 690 aa6.07□□□□□ -1.44
LRRC28-212ENST00000558911 DNAAF2Q9NVR5 837 aaKnown RBP6.07□□□□□ -1.44
LRRC28-212ENST00000558911 ATP4AP20648 1035 aa6.06□□□□□ -1.44
LRRC28-212ENST00000558911 GDF10P55107 478 aa6.06□□□□□ -1.44
LRRC28-212ENST00000558911 TRIM11Q96F44 468 aa6.06□□□□□ -1.44
LRRC28-212ENST00000558911 KLF15Q9UIH9 416 aa6.06□□□□□ -1.44
LRRC28-212ENST00000558911 TNP2Q05952 138 aa6.05□□□□□ -1.44
LRRC28-212ENST00000558911 NIFKQ9BYG3 293 aaKnown RBP6.05□□□□□ -1.44
LRRC28-212ENST00000558911 HCN2Q9UL51 889 aa6.05□□□□□ -1.44
LRRC28-212ENST00000558911 APBB1O00213 710 aa6.04□□□□□ -1.44
LRRC28-212ENST00000558911 INHAP05111 366 aa6.04□□□□□ -1.44
LRRC28-212ENST00000558911 EIF4G2P78344 907 aaKnown RBP eCLIP6.04□□□□□ -1.44
LRRC28-212ENST00000558911 NBPF1Q3BBV0 1214 aa6.04□□□□□ -1.44
LRRC28-212ENST00000558911 BICDL1Q6ZP65 573 aa6.04□□□□□ -1.44
LRRC28-212ENST00000558911 NLRP8Q86W28 1048 aa6.04□□□□□ -1.44
LRRC28-212ENST00000558911 BANK1Q8NDB2 785 aa6.04□□□□□ -1.44
LRRC28-212ENST00000558911 SIRT1Q96EB6 747 aa6.04□□□□□ -1.44
LRRC28-212ENST00000558911 CABP1Q9NZU7 370 aa6.04□□□□□ -1.44
LRRC28-212ENST00000558911 TBC1D2BQ9UPU7 963 aa6.04□□□□□ -1.44
LRRC28-212ENST00000558911 PARP3Q9Y6F1 533 aa6.04□□□□□ -1.44
LRRC28-212ENST00000558911 FAM229AH3BQW9 127 aa6.03□□□□□ -1.44
LRRC28-212ENST00000558911 SPATA31C1P0DKV0 1188 aa6.03□□□□□ -1.44
LRRC28-212ENST00000558911 TATP17735 454 aaPredicted RBP6.03□□□□□ -1.44
LRRC28-212ENST00000558911 RANGAP1P46060 587 aaPredicted RBP6.03□□□□□ -1.44
LRRC28-212ENST00000558911 FBXO41Q8TF61 875 aa6.03□□□□□ -1.44
LRRC28-212ENST00000558911 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.02□□□□□ -1.45
LRRC28-212ENST00000558911 SCNN1DP51172 638 aa6.02□□□□□ -1.45
LRRC28-212ENST00000558911 SMTNP53814 917 aa6.02□□□□□ -1.45
LRRC28-212ENST00000558911 VAC14Q08AM6 782 aa6.02□□□□□ -1.45
LRRC28-212ENST00000558911 PRRT3Q5FWE3 981 aa6.02□□□□□ -1.45
LRRC28-212ENST00000558911 PHTF2Q8N3S3 785 aa6.02□□□□□ -1.45
LRRC28-212ENST00000558911 C1orf216Q8TAB5 229 aa6.02□□□□□ -1.45
LRRC28-212ENST00000558911 KRTAP9-2Q9BYQ4 174 aa6.02□□□□□ -1.45
LRRC28-212ENST00000558911 STRN4Q9NRL3 753 aa6.02□□□□□ -1.45
LRRC28-212ENST00000558911 PODXL2Q9NZ53 605 aa6.02□□□□□ -1.45
LRRC28-212ENST00000558911 MARK1Q9P0L2 795 aa6.02□□□□□ -1.45
LRRC28-212ENST00000558911 SUPT5HO00267 1087 aaKnown RBP6.01□□□□□ -1.45
LRRC28-212ENST00000558911 APBA3O96018 575 aa6.01□□□□□ -1.45
LRRC28-212ENST00000558911 ALAS2P22557 587 aa6.01□□□□□ -1.45
LRRC28-212ENST00000558911 ZIC5Q96T25 663 aa6.01□□□□□ -1.45
LRRC28-212ENST00000558911 TPSG1Q9NRR2 321 aa6.01□□□□□ -1.45
LRRC28-212ENST00000558911 USP3Q9Y6I4 520 aa6.01□□□□□ -1.45
LRRC28-212ENST00000558911 KRTAP9-6A0A140TA67 174 aa6□□□□□ -1.45
LRRC28-212ENST00000558911 RSPO4Q2I0M5 234 aaPredicted RBP6□□□□□ -1.45
LRRC28-212ENST00000558911 FAM182BQ5T319 152 aa6□□□□□ -1.45
LRRC28-212ENST00000558911 ZNF468Q5VIY5 522 aaPredicted RBP6□□□□□ -1.45
LRRC28-212ENST00000558911 SYT9Q86SS6 491 aa6□□□□□ -1.45
LRRC28-212ENST00000558911 ELOA3CA0A087WX78 387 aaPredicted RBP5.99□□□□□ -1.45
LRRC28-212ENST00000558911 SPDYE3A6NKU9 549 aa5.99□□□□□ -1.45
LRRC28-212ENST00000558911 ELOA3DA6NLF2 546 aaPredicted RBP5.99□□□□□ -1.45
LRRC28-212ENST00000558911 ELOA3BQ3SY89 546 aa5.99□□□□□ -1.45
LRRC28-212ENST00000558911 C8orf86Q6ZUL3 223 aa5.99□□□□□ -1.45
LRRC28-212ENST00000558911 ELOA3Q8NG57 546 aa5.99□□□□□ -1.45
LRRC28-212ENST00000558911 PRM3Q9NNZ6 103 aa5.99□□□□□ -1.45
LRRC28-212ENST00000558911 AVENQ9NQS1 362 aaPredicted RBP5.99□□□□□ -1.45
LRRC28-212ENST00000558911 A6NJY4 79 aa5.98□□□□□ -1.45
LRRC28-212ENST00000558911 M0R082 166 aa5.98□□□□□ -1.45
LRRC28-212ENST00000558911 FAM157BP0CG42 384 aa5.98□□□□□ -1.45
LRRC28-212ENST00000558911 TXLNAP40222 546 aa5.98□□□□□ -1.45
LRRC28-212ENST00000558911 GRIK4Q16099 956 aa5.98□□□□□ -1.45
LRRC28-212ENST00000558911 FOXD4L6Q3SYB3 417 aaPredicted RBP5.98□□□□□ -1.45
LRRC28-212ENST00000558911 FOXD4L3Q6VB84 417 aaPredicted RBP5.98□□□□□ -1.45
LRRC28-212ENST00000558911 LRRC69Q6ZNQ3 347 aa5.98□□□□□ -1.45
LRRC28-212ENST00000558911 PLPP7Q8NBV4 271 aa5.98□□□□□ -1.45
LRRC28-212ENST00000558911 ZNF417Q8TAU3 575 aa5.98□□□□□ -1.45
LRRC28-212ENST00000558911 ZNF587Q96SQ5 575 aaPredicted RBP5.98□□□□□ -1.45
LRRC28-212ENST00000558911 NEUROD4Q9HD90 331 aa5.98□□□□□ -1.45
LRRC28-212ENST00000558911 TMEM229AB2RXF0 380 aa5.97□□□□□ -1.45
LRRC28-212ENST00000558911 ABL2P42684 1182 aa5.97□□□□□ -1.45
LRRC28-212ENST00000558911 TRIM28Q13263 835 aaKnown RBP5.97□□□□□ -1.45
LRRC28-212ENST00000558911 IRF5Q13568 498 aa5.97□□□□□ -1.45
LRRC28-212ENST00000558911 RAB44Q7Z6P3 723 aaPredicted RBP5.97□□□□□ -1.45
LRRC28-212ENST00000558911 NBPF11Q86T75 865 aa5.97□□□□□ -1.45
LRRC28-212ENST00000558911 ZDHHC3Q9NYG2 299 aa5.97□□□□□ -1.45
LRRC28-212ENST00000558911 CDK2AP1O14519 115 aa5.96□□□□□ -1.46
LRRC28-212ENST00000558911 DYRK3O43781 588 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms