RNA–Protein interactions for RNA: ENST00000558796.2

PBX1-213, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 366 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-213ENST00000558796 ZBTB1Q9Y2K1 713 aa14.55□□□□□ -0.08
PBX1-213ENST00000558796 KIAA1551Q9HCM1 1747 aa14.55□□□□□ -0.08
PBX1-213ENST00000558796 UTRNP46939 3433 aa14.54□□□□□ -0.08
PBX1-213ENST00000558796 RFC4P35249 363 aa14.54□□□□□ -0.08
PBX1-213ENST00000558796 ADAMTS8Q9UP79 889 aa14.54□□□□□ -0.08
PBX1-213ENST00000558796 RRP7AQ9Y3A4 280 aaKnown RBP14.54□□□□□ -0.08
PBX1-213ENST00000558796 SOS1Q07889 1333 aaPredicted RBP14.54□□□□□ -0.08
PBX1-213ENST00000558796 COL15A1P39059 1388 aa14.54□□□□□ -0.08
PBX1-213ENST00000558796 MIS18AQ9NYP9 233 aa14.53□□□□□ -0.08
PBX1-213ENST00000558796 SRP68Q9UHB9 627 aaKnown RBP14.53□□□□□ -0.08
PBX1-213ENST00000558796 TMPOP42166 694 aaKnown RBP14.52□□□□□ -0.09
PBX1-213ENST00000558796 RIPK4P57078 832 aa14.52□□□□□ -0.09
PBX1-213ENST00000558796 TAF7Q15545 349 aaPredicted RBP14.52□□□□□ -0.09
PBX1-213ENST00000558796 NEUROD2Q15784 382 aa14.52□□□□□ -0.09
PBX1-213ENST00000558796 CCDC184Q52MB2 194 aa14.52□□□□□ -0.09
PBX1-213ENST00000558796 BRCA1P38398 1863 aaKnown RBP14.51□□□□□ -0.09
PBX1-213ENST00000558796 USP42Q9H9J4 1324 aaKnown RBP14.51□□□□□ -0.09
PBX1-213ENST00000558796 PRAMEF22A3QJZ6 481 aa14.51□□□□□ -0.09
PBX1-213ENST00000558796 ANP32CO43423 234 aa14.51□□□□□ -0.09
PBX1-213ENST00000558796 STARD3NLO95772 234 aa14.51□□□□□ -0.09
PBX1-213ENST00000558796 MMP10P09238 476 aa14.51□□□□□ -0.09
PBX1-213ENST00000558796 GYS1P13807 737 aa14.51□□□□□ -0.09
PBX1-213ENST00000558796 CANXP27824 592 aaKnown RBP14.51□□□□□ -0.09
PBX1-213ENST00000558796 NLGN2Q8NFZ4 835 aa14.51□□□□□ -0.09
PBX1-213ENST00000558796 RUNDC1Q96C34 613 aa14.51□□□□□ -0.09
PBX1-213ENST00000558796 ZNF330Q9Y3S2 320 aaPredicted RBP14.5□□□□□ -0.09
PBX1-213ENST00000558796 LMOD3Q0VAK6 560 aa14.49□□□□□ -0.09
PBX1-213ENST00000558796 TEX13AQ9BXU3 409 aaPredicted RBP14.49□□□□□ -0.09
PBX1-213ENST00000558796 NRXN2Q9P2S2 1712 aa14.49□□□□□ -0.09
PBX1-213ENST00000558796 NUP98P52948 1817 aa14.48□□□□□ -0.09
PBX1-213ENST00000558796 A1BGP04217 495 aa14.48□□□□□ -0.09
PBX1-213ENST00000558796 PIP4K2AP48426 406 aaPredicted RBP14.48□□□□□ -0.09
PBX1-213ENST00000558796 FKBP8Q14318 412 aa14.48□□□□□ -0.09
PBX1-213ENST00000558796 USPL1Q5W0Q7 1092 aa14.48□□□□□ -0.09
PBX1-213ENST00000558796 NLGN1Q8N2Q7 840 aa14.48□□□□□ -0.09
PBX1-213ENST00000558796 PNISRQ8TF01 805 aaKnown RBP14.48□□□□□ -0.09
PBX1-213ENST00000558796 USP16Q9Y5T5 823 aa14.48□□□□□ -0.09
PBX1-213ENST00000558796 DCAF8L1A6NGE4 600 aa14.47□□□□□ -0.09
PBX1-213ENST00000558796 ZPR1O75312 459 aa14.47□□□□□ -0.09
PBX1-213ENST00000558796 SNRPA1P09661 255 aaKnown RBP14.47□□□□□ -0.09
PBX1-213ENST00000558796 PELP1Q8IZL8 1130 aaKnown RBP14.47□□□□□ -0.09
PBX1-213ENST00000558796 C10orf71Q711Q0 1435 aa14.47□□□□□ -0.09
PBX1-213ENST00000558796 EIF5P55010 431 aaKnown RBP14.46□□□□□ -0.09
PBX1-213ENST00000558796 MRS2Q9HD23 443 aa14.46□□□□□ -0.09
PBX1-213ENST00000558796 TSPYL4Q9UJ04 414 aa14.46□□□□□ -0.09
PBX1-213ENST00000558796 CD2APQ9Y5K6 639 aa14.46□□□□□ -0.09
PBX1-213ENST00000558796 DLEC1Q9Y238 1755 aa14.46□□□□□ -0.09
PBX1-213ENST00000558796 CACNA1SQ13698 1873 aa14.46□□□□□ -0.1
PBX1-213ENST00000558796 ANKRD31Q8N7Z5 1873 aa14.46□□□□□ -0.1
PBX1-213ENST00000558796 EIF4A1P60842 406 aaKnown RBP14.45□□□□□ -0.1
PBX1-213ENST00000558796 DDR1Q08345 913 aa14.45□□□□□ -0.1
PBX1-213ENST00000558796 NARFQ9UHQ1 456 aa14.45□□□□□ -0.1
PBX1-213ENST00000558796 TRIM35Q9UPQ4 493 aa14.45□□□□□ -0.1
PBX1-213ENST00000558796 PARP3Q9Y6F1 533 aa14.45□□□□□ -0.1
PBX1-213ENST00000558796 ARFGEF1Q9Y6D6 1849 aa14.44□□□□□ -0.1
PBX1-213ENST00000558796 APAF1O14727 1248 aa14.44□□□□□ -0.1
PBX1-213ENST00000558796 IL6STP40189 918 aaPredicted RBP14.44□□□□□ -0.1
PBX1-213ENST00000558796 PXDNLA1KZ92 1463 aa14.44□□□□□ -0.1
PBX1-213ENST00000558796 A0A087WZG4 1122 aa14.43□□□□□ -0.1
PBX1-213ENST00000558796 SENP3-EIF4A1A0A087X0R7 540 aa14.43□□□□□ -0.1
PBX1-213ENST00000558796 GPR162Q16538 588 aa14.43□□□□□ -0.1
PBX1-213ENST00000558796 BCL2L12Q9HB09 334 aa14.43□□□□□ -0.1
PBX1-213ENST00000558796 WWC3Q9ULE0 1092 aa14.43□□□□□ -0.1
PBX1-213ENST00000558796 TBC1D2BQ9UPU7 963 aa14.43□□□□□ -0.1
PBX1-213ENST00000558796 LAS1LQ9Y4W2 734 aaKnown RBP14.43□□□□□ -0.1
PBX1-213ENST00000558796 COL11A2P13942 1736 aaPredicted RBP14.43□□□□□ -0.1
PBX1-213ENST00000558796 ANKRD36CQ5JPF3 1778 aa14.42□□□□□ -0.1
PBX1-213ENST00000558796 NBPF26B4DH59 902 aa14.42□□□□□ -0.1
PBX1-213ENST00000558796 POLRMTO00411 1230 aaKnown RBP14.42□□□□□ -0.1
PBX1-213ENST00000558796 GIGYF1O75420 1035 aaPredicted RBP14.42□□□□□ -0.1
PBX1-213ENST00000558796 NFIXQ14938 502 aa14.42□□□□□ -0.1
PBX1-213ENST00000558796 NBPF10Q6P3W6 841 aaKnown RBP14.42□□□□□ -0.1
PBX1-213ENST00000558796 NPM2Q86SE8 214 aaKnown RBP14.42□□□□□ -0.1
PBX1-213ENST00000558796 NBPF15Q8N660 670 aa14.42□□□□□ -0.1
PBX1-213ENST00000558796 YBX3P16989 372 aaKnown RBP eCLIP14.41□□□□□ -0.1
PBX1-213ENST00000558796 BICDL1Q6ZP65 573 aa14.41□□□□□ -0.1
PBX1-213ENST00000558796 DZIP3Q86Y13 1208 aaKnown RBP14.41□□□□□ -0.1
PBX1-213ENST00000558796 CAMTA2O94983 1202 aa14.4□□□□□ -0.1
PBX1-213ENST00000558796 TM4SF1P30408 202 aa14.4□□□□□ -0.1
PBX1-213ENST00000558796 KRT24Q2M2I5 525 aa14.39□□□□□ -0.11
PBX1-213ENST00000558796 TBC1D9BQ66K14 1250 aa14.39□□□□□ -0.11
PBX1-213ENST00000558796 BABAM1Q9NWV8 329 aa14.39□□□□□ -0.11
PBX1-213ENST00000558796 CARMIL3Q8ND23 1372 aa14.38□□□□□ -0.11
PBX1-213ENST00000558796 CHL1O00533 1208 aa14.38□□□□□ -0.11
PBX1-213ENST00000558796 NGEFQ8N5V2 710 aa14.38□□□□□ -0.11
PBX1-213ENST00000558796 A0A0G2JLW4 131 aa14.37□□□□□ -0.11
PBX1-213ENST00000558796 SERPINB2P05120 415 aa14.37□□□□□ -0.11
PBX1-213ENST00000558796 MYL6BP14649 208 aa14.37□□□□□ -0.11
PBX1-213ENST00000558796 EIF2S2P20042 333 aaKnown RBP14.37□□□□□ -0.11
PBX1-213ENST00000558796 NECTIN2Q92692 538 aa14.37□□□□□ -0.11
PBX1-213ENST00000558796 ARFGEF2Q9Y6D5 1785 aa14.37□□□□□ -0.11
PBX1-213ENST00000558796 DPEP1P16444 411 aa14.36□□□□□ -0.11
PBX1-213ENST00000558796 YY1P25490 414 aa14.36□□□□□ -0.11
PBX1-213ENST00000558796 CFAP44Q96MT7 982 aa14.36□□□□□ -0.11
PBX1-213ENST00000558796 MBIPQ9NS73 344 aa14.36□□□□□ -0.11
PBX1-213ENST00000558796 CCDC88AQ3V6T2 1871 aa14.35□□□□□ -0.11
PBX1-213ENST00000558796 TGFB2P61812 414 aa14.35□□□□□ -0.11
PBX1-213ENST00000558796 FAM9BQ8IZU0 186 aa14.35□□□□□ -0.11
PBX1-213ENST00000558796 TNRC6CQ9HCJ0 1690 aaKnown RBP14.35□□□□□ -0.11
PBX1-213ENST00000558796 ANXA1P04083 346 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms