RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 ADAMTS8Q9UP79 889 aa11.17□□□□□ -0.62
TPM1-213ENST00000558400 PHF14O94880 888 aa11.16□□□□□ -0.62
TPM1-213ENST00000558400 CYP19A1P11511 503 aaPredicted RBP11.16□□□□□ -0.62
TPM1-213ENST00000558400 TMPOP42166 694 aaKnown RBP11.16□□□□□ -0.62
TPM1-213ENST00000558400 DNAJC10Q8IXB1 793 aa11.16□□□□□ -0.62
TPM1-213ENST00000558400 ARHGEF1Q92888 912 aaKnown RBP11.16□□□□□ -0.62
TPM1-213ENST00000558400 ZNF496Q96IT1 587 aaPredicted RBP11.16□□□□□ -0.62
TPM1-213ENST00000558400 MRC1P22897 1456 aa11.15□□□□□ -0.62
TPM1-213ENST00000558400 DCTN1Q14203 1278 aa11.15□□□□□ -0.62
TPM1-213ENST00000558400 NPM2Q86SE8 214 aaKnown RBP11.15□□□□□ -0.62
TPM1-213ENST00000558400 PELP1Q8IZL8 1130 aaKnown RBP11.15□□□□□ -0.62
TPM1-213ENST00000558400 CCDC87Q9NVE4 849 aa11.15□□□□□ -0.62
TPM1-213ENST00000558400 BABAM1Q9NWV8 329 aa11.15□□□□□ -0.62
TPM1-213ENST00000558400 SCN11AQ9UI33 1791 aa11.15□□□□□ -0.62
TPM1-213ENST00000558400 SNRPA1P09661 255 aaKnown RBP11.14□□□□□ -0.63
TPM1-213ENST00000558400 INTS5Q6P9B9 1019 aaKnown RBP11.14□□□□□ -0.63
TPM1-213ENST00000558400 HEG1Q9ULI3 1381 aa11.14□□□□□ -0.63
TPM1-213ENST00000558400 A0A087WZG4 1122 aa11.13□□□□□ -0.63
TPM1-213ENST00000558400 ZPR1O75312 459 aa11.13□□□□□ -0.63
TPM1-213ENST00000558400 KLHL34Q8N239 644 aa11.13□□□□□ -0.63
TPM1-213ENST00000558400 GPBP1L1Q9HC44 474 aaPredicted RBP11.13□□□□□ -0.63
TPM1-213ENST00000558400 ZNF831Q5JPB2 1677 aa11.13□□□□□ -0.63
TPM1-213ENST00000558400 ADCY9O60503 1353 aa11.13□□□□□ -0.63
TPM1-213ENST00000558400 C4BP0C0L5 1744 aa11.12□□□□□ -0.63
TPM1-213ENST00000558400 C5P01031 1676 aa11.12□□□□□ -0.63
TPM1-213ENST00000558400 ADAMTS7Q9UKP4 1686 aa11.12□□□□□ -0.63
TPM1-213ENST00000558400 AMIGO3Q86WK7 504 aa11.12□□□□□ -0.63
TPM1-213ENST00000558400 CD2APQ9Y5K6 639 aa11.12□□□□□ -0.63
TPM1-213ENST00000558400 WDR90Q96KV7 1748 aa11.12□□□□□ -0.63
TPM1-213ENST00000558400 KCNQ3O43525 872 aa11.11□□□□□ -0.63
TPM1-213ENST00000558400 GRIN3BO60391 1043 aa11.11□□□□□ -0.63
TPM1-213ENST00000558400 IL6STP40189 918 aaPredicted RBP11.11□□□□□ -0.63
TPM1-213ENST00000558400 NEUROD2Q15784 382 aa11.11□□□□□ -0.63
TPM1-213ENST00000558400 MSL1Q68DK7 614 aa11.11□□□□□ -0.63
TPM1-213ENST00000558400 SMIM5Q71RC9 77 aa11.11□□□□□ -0.63
TPM1-213ENST00000558400 CCDC146Q8IYE0 955 aa11.11□□□□□ -0.63
TPM1-213ENST00000558400 ZNF219Q9P2Y4 722 aaPredicted RBP11.11□□□□□ -0.63
TPM1-213ENST00000558400 TAF1LQ8IZX4 1826 aa11.11□□□□□ -0.63
TPM1-213ENST00000558400 GYS1P13807 737 aa11.1□□□□□ -0.63
TPM1-213ENST00000558400 YBX3P16989 372 aaKnown RBP eCLIP11.1□□□□□ -0.63
TPM1-213ENST00000558400 CANXP27824 592 aaKnown RBP11.1□□□□□ -0.63
TPM1-213ENST00000558400 EIF5P55010 431 aaKnown RBP11.1□□□□□ -0.63
TPM1-213ENST00000558400 CALD1Q05682 793 aaKnown RBP11.1□□□□□ -0.63
TPM1-213ENST00000558400 SAMD1Q6SPF0 538 aaPredicted RBP11.1□□□□□ -0.63
TPM1-213ENST00000558400 NLGN2Q8NFZ4 835 aa11.1□□□□□ -0.63
TPM1-213ENST00000558400 MRS2Q9HD23 443 aa11.1□□□□□ -0.63
TPM1-213ENST00000558400 MIS18AQ9NYP9 233 aa11.1□□□□□ -0.63
TPM1-213ENST00000558400 NARFQ9UHQ1 456 aa11.1□□□□□ -0.63
TPM1-213ENST00000558400 USP16Q9Y5T5 823 aa11.1□□□□□ -0.63
TPM1-213ENST00000558400 SOS1Q07889 1333 aaPredicted RBP11.09□□□□□ -0.63
TPM1-213ENST00000558400 APAF1O14727 1248 aa11.09□□□□□ -0.63
TPM1-213ENST00000558400 MYCNP04198 464 aaPredicted RBP11.09□□□□□ -0.63
TPM1-213ENST00000558400 EIF4A1P60842 406 aaKnown RBP11.09□□□□□ -0.63
TPM1-213ENST00000558400 TSPYL4Q9UJ04 414 aa11.09□□□□□ -0.63
TPM1-213ENST00000558400 ZBTB1Q9Y2K1 713 aa11.09□□□□□ -0.63
TPM1-213ENST00000558400 RRP7AQ9Y3A4 280 aaKnown RBP11.09□□□□□ -0.63
TPM1-213ENST00000558400 PARP3Q9Y6F1 533 aa11.09□□□□□ -0.63
TPM1-213ENST00000558400 USP42Q9H9J4 1324 aaKnown RBP11.09□□□□□ -0.63
TPM1-213ENST00000558400 A1BGP04217 495 aa11.08□□□□□ -0.64
TPM1-213ENST00000558400 MMP10P09238 476 aa11.08□□□□□ -0.64
TPM1-213ENST00000558400 THUMPD2Q9BTF0 503 aaKnown RBP11.08□□□□□ -0.64
TPM1-213ENST00000558400 TRIM35Q9UPQ4 493 aa11.08□□□□□ -0.64
TPM1-213ENST00000558400 KCPQ6ZWJ8 1503 aa11.08□□□□□ -0.64
TPM1-213ENST00000558400 CHL1O00533 1208 aa11.07□□□□□ -0.64
TPM1-213ENST00000558400 APLP1P51693 650 aa11.07□□□□□ -0.64
TPM1-213ENST00000558400 CCDC184Q52MB2 194 aa11.07□□□□□ -0.64
TPM1-213ENST00000558400 UBR3Q6ZT12 1888 aa11.06□□□□□ -0.64
TPM1-213ENST00000558400 COL15A1P39059 1388 aa11.06□□□□□ -0.64
TPM1-213ENST00000558400 RGL2O15211 777 aa11.06□□□□□ -0.64
TPM1-213ENST00000558400 TM4SF1P30408 202 aa11.06□□□□□ -0.64
TPM1-213ENST00000558400 TGFB2P61812 414 aa11.06□□□□□ -0.64
TPM1-213ENST00000558400 FKBP8Q14318 412 aa11.06□□□□□ -0.64
TPM1-213ENST00000558400 USPL1Q5W0Q7 1092 aa11.06□□□□□ -0.64
TPM1-213ENST00000558400 CLEC4GQ6UXB4 293 aa11.06□□□□□ -0.64
TPM1-213ENST00000558400 NGEFQ8N5V2 710 aa11.06□□□□□ -0.64
TPM1-213ENST00000558400 CFAP44Q96MT7 982 aa11.06□□□□□ -0.64
TPM1-213ENST00000558400 CHMP4AQ9BY43 222 aa11.06□□□□□ -0.64
TPM1-213ENST00000558400 SRP68Q9UHB9 627 aaKnown RBP11.06□□□□□ -0.64
TPM1-213ENST00000558400 PRELPP51888 382 aa11.05□□□□□ -0.64
TPM1-213ENST00000558400 GNAI1P63096 354 aa11.05□□□□□ -0.64
TPM1-213ENST00000558400 CCDC27Q2M243 656 aa11.05□□□□□ -0.64
TPM1-213ENST00000558400 ZNF526Q8TF50 670 aaPredicted RBP11.05□□□□□ -0.64
TPM1-213ENST00000558400 ZNF330Q9Y3S2 320 aaPredicted RBP11.05□□□□□ -0.64
TPM1-213ENST00000558400 LAS1LQ9Y4W2 734 aaKnown RBP11.05□□□□□ -0.64
TPM1-213ENST00000558400 CICQ96RK0 1608 aaPredicted RBP11.05□□□□□ -0.64
TPM1-213ENST00000558400 MYH14Q7Z406 1995 aaKnown RBP11.05□□□□□ -0.64
TPM1-213ENST00000558400 PRAMEF22A3QJZ6 481 aa11.04□□□□□ -0.64
TPM1-213ENST00000558400 COL13A1Q5TAT6 717 aaPredicted RBP11.04□□□□□ -0.64
TPM1-213ENST00000558400 DZIP3Q86Y13 1208 aaKnown RBP11.04□□□□□ -0.64
TPM1-213ENST00000558400 DNAJC5GQ8N7S2 189 aa11.04□□□□□ -0.64
TPM1-213ENST00000558400 TBC1D2BQ9UPU7 963 aa11.04□□□□□ -0.64
TPM1-213ENST00000558400 ZNF652Q9Y2D9 606 aa11.04□□□□□ -0.64
TPM1-213ENST00000558400 ERBB4Q15303 1308 aa11.04□□□□□ -0.64
TPM1-213ENST00000558400 COL5A3P25940 1745 aaPredicted RBP11.04□□□□□ -0.64
TPM1-213ENST00000558400 VIRMAQ69YN4 1812 aaKnown RBP11.03□□□□□ -0.64
TPM1-213ENST00000558400 KIF3CO14782 793 aa11.03□□□□□ -0.64
TPM1-213ENST00000558400 SLC34A2O95436 690 aa11.03□□□□□ -0.64
TPM1-213ENST00000558400 HOXB7P09629 217 aa11.03□□□□□ -0.64
TPM1-213ENST00000558400 NFIXQ14938 502 aa11.03□□□□□ -0.64
TPM1-213ENST00000558400 SETDB2Q96T68 719 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms