RNA–Protein interactions for RNA: ENST00000558271.5

LRRC49-209, Transcript of leucine rich repeat containing 49, humanhuman

TSL 4

Gene LRRC49, Length 573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-209ENST00000558271 KLF15Q9UIH9 416 aa7.44□□□□□ -1.22
LRRC49-209ENST00000558271 ATXN7O15265 892 aaPredicted RBP7.43□□□□□ -1.22
LRRC49-209ENST00000558271 PLA2G4AP47712 749 aa7.43□□□□□ -1.22
LRRC49-209ENST00000558271 TNP2Q05952 138 aa7.43□□□□□ -1.22
LRRC49-209ENST00000558271 IRF5Q13568 498 aa7.43□□□□□ -1.22
LRRC49-209ENST00000558271 NIFKQ9BYG3 293 aaKnown RBP7.43□□□□□ -1.22
LRRC49-209ENST00000558271 KRTAP9-2Q9BYQ4 174 aa7.43□□□□□ -1.22
LRRC49-209ENST00000558271 NOP53Q9NZM5 478 aaKnown RBP7.43□□□□□ -1.22
LRRC49-209ENST00000558271 TBC1D2BQ9UPU7 963 aa7.43□□□□□ -1.22
LRRC49-209ENST00000558271 SMTNP53814 917 aa7.42□□□□□ -1.22
LRRC49-209ENST00000558271 BRPF1P55201 1214 aaPredicted RBP7.42□□□□□ -1.22
LRRC49-209ENST00000558271 CHSY3Q70JA7 882 aa7.42□□□□□ -1.22
LRRC49-209ENST00000558271 ZNF295-AS1Q8N0V1 137 aa7.42□□□□□ -1.22
LRRC49-209ENST00000558271 AVENQ9NQS1 362 aaPredicted RBP7.42□□□□□ -1.22
LRRC49-209ENST00000558271 MAPTP10636 758 aaKnown RBP7.41□□□□□ -1.22
LRRC49-209ENST00000558271 ADH6P28332 368 aa7.41□□□□□ -1.22
LRRC49-209ENST00000558271 CHRNA4P43681 627 aa7.41□□□□□ -1.22
LRRC49-209ENST00000558271 GDF10P55107 478 aa7.41□□□□□ -1.22
LRRC49-209ENST00000558271 OXLD1Q5BKU9 147 aa7.41□□□□□ -1.22
LRRC49-209ENST00000558271 AIDAQ96BJ3 306 aa7.41□□□□□ -1.22
LRRC49-209ENST00000558271 KRTAP9-6A0A140TA67 174 aa7.4□□□□□ -1.22
LRRC49-209ENST00000558271 A0A1W2PNR3 127 aa7.4□□□□□ -1.22
LRRC49-209ENST00000558271 FCHSD1Q86WN1 690 aa7.4□□□□□ -1.22
LRRC49-209ENST00000558271 SLC4A9Q96Q91 983 aa7.4□□□□□ -1.22
LRRC49-209ENST00000558271 CDK2AP1O14519 115 aa7.39□□□□□ -1.23
LRRC49-209ENST00000558271 ITGB7P26010 798 aa7.39□□□□□ -1.23
LRRC49-209ENST00000558271 MAP7D1Q3KQU3 841 aa7.39□□□□□ -1.23
LRRC49-209ENST00000558271 PRM3Q9NNZ6 103 aa7.39□□□□□ -1.23
LRRC49-209ENST00000558271 CD33P20138 364 aa7.38□□□□□ -1.23
LRRC49-209ENST00000558271 MTFR1Q15390 333 aa7.38□□□□□ -1.23
LRRC49-209ENST00000558271 ARSJQ5FYB0 599 aaPredicted RBP7.38□□□□□ -1.23
LRRC49-209ENST00000558271 ZIC5Q96T25 663 aa7.38□□□□□ -1.23
LRRC49-209ENST00000558271 IQSEC3Q9UPP2 1182 aaPredicted RBP7.38□□□□□ -1.23
LRRC49-209ENST00000558271 DCDC2BA2VCK2 349 aa7.37□□□□□ -1.23
LRRC49-209ENST00000558271 TRIM11Q96F44 468 aa7.37□□□□□ -1.23
LRRC49-209ENST00000558271 ZDHHC3Q9NYG2 299 aa7.37□□□□□ -1.23
LRRC49-209ENST00000558271 TMEM229AB2RXF0 380 aa7.36□□□□□ -1.23
LRRC49-209ENST00000558271 KHNYNO15037 678 aaKnown RBP7.36□□□□□ -1.23
LRRC49-209ENST00000558271 FAM157BP0CG42 384 aa7.36□□□□□ -1.23
LRRC49-209ENST00000558271 DOC2BQ14184 412 aa7.36□□□□□ -1.23
LRRC49-209ENST00000558271 NBPF1Q3BBV0 1214 aa7.36□□□□□ -1.23
LRRC49-209ENST00000558271 SAMD5Q5TGI4 173 aa7.36□□□□□ -1.23
LRRC49-209ENST00000558271 ZNF468Q5VIY5 522 aaPredicted RBP7.36□□□□□ -1.23
LRRC49-209ENST00000558271 PLVAPQ9BX97 442 aa7.36□□□□□ -1.23
LRRC49-209ENST00000558271 A6NJY4 79 aa7.35□□□□□ -1.23
LRRC49-209ENST00000558271 TATP17735 454 aaPredicted RBP7.35□□□□□ -1.23
LRRC49-209ENST00000558271 PCBP4P57723 403 aaKnown RBP7.35□□□□□ -1.23
LRRC49-209ENST00000558271 VAC14Q08AM6 782 aa7.35□□□□□ -1.23
LRRC49-209ENST00000558271 PLPP7Q8NBV4 271 aa7.35□□□□□ -1.23
LRRC49-209ENST00000558271 SEMA6BQ9H3T3 888 aa7.35□□□□□ -1.23
LRRC49-209ENST00000558271 SERTAD1Q9UHV2 236 aa7.35□□□□□ -1.23
LRRC49-209ENST00000558271 USP3Q9Y6I4 520 aa7.35□□□□□ -1.23
LRRC49-209ENST00000558271 EFSO43281 561 aa7.34□□□□□ -1.23
LRRC49-209ENST00000558271 SPATA31C1P0DKV0 1188 aa7.34□□□□□ -1.23
LRRC49-209ENST00000558271 GATA4P43694 442 aa7.34□□□□□ -1.23
LRRC49-209ENST00000558271 LAMC2Q13753 1193 aa7.34□□□□□ -1.23
LRRC49-209ENST00000558271 MDFIQ99750 246 aa7.34□□□□□ -1.23
LRRC49-209ENST00000558271 STRN4Q9NRL3 753 aa7.34□□□□□ -1.23
LRRC49-209ENST00000558271 MARK1Q9P0L2 795 aa7.34□□□□□ -1.23
LRRC49-209ENST00000558271 PRR12Q9ULL5 1215 aa7.34□□□□□ -1.23
LRRC49-209ENST00000558271 PCDHGA11Q9Y5H2 935 aa7.34□□□□□ -1.23
LRRC49-209ENST00000558271 WASHC4Q2M389 1173 aa7.32□□□□□ -1.24
LRRC49-209ENST00000558271 PSMG3-AS1Q96PY0 264 aa7.32□□□□□ -1.24
LRRC49-209ENST00000558271 GDPD2Q9HCC8 539 aa7.32□□□□□ -1.24
LRRC49-209ENST00000558271 CABP1Q9NZU7 370 aa7.32□□□□□ -1.24
LRRC49-209ENST00000558271 GJA3Q9Y6H8 435 aa7.32□□□□□ -1.24
LRRC49-209ENST00000558271 ELOA3CA0A087WX78 387 aaPredicted RBP7.31□□□□□ -1.24
LRRC49-209ENST00000558271 ELOA3DA6NLF2 546 aaPredicted RBP7.31□□□□□ -1.24
LRRC49-209ENST00000558271 ELOA3BQ3SY89 546 aa7.31□□□□□ -1.24
LRRC49-209ENST00000558271 ELOA3Q8NG57 546 aa7.31□□□□□ -1.24
LRRC49-209ENST00000558271 ALAS2P22557 587 aa7.3□□□□□ -1.24
LRRC49-209ENST00000558271 SOX11P35716 441 aa7.3□□□□□ -1.24
LRRC49-209ENST00000558271 SEMA3FQ13275 785 aa7.3□□□□□ -1.24
LRRC49-209ENST00000558271 C7orf43Q8WVR3 580 aa7.3□□□□□ -1.24
LRRC49-209ENST00000558271 SCHIP1Q9P0W5 487 aaPredicted RBP7.3□□□□□ -1.24
LRRC49-209ENST00000558271 PARP3Q9Y6F1 533 aa7.3□□□□□ -1.24
LRRC49-209ENST00000558271 ADARB2-AS1A8MUL3 147 aa7.29□□□□□ -1.24
LRRC49-209ENST00000558271 BACH1O14867 736 aa7.29□□□□□ -1.24
LRRC49-209ENST00000558271 TXLNAP40222 546 aa7.29□□□□□ -1.24
LRRC49-209ENST00000558271 COL9A3Q14050 684 aaPredicted RBP7.29□□□□□ -1.24
LRRC49-209ENST00000558271 RSPO4Q2I0M5 234 aaPredicted RBP7.29□□□□□ -1.24
LRRC49-209ENST00000558271 NKAPLQ5M9Q1 402 aa7.29□□□□□ -1.24
LRRC49-209ENST00000558271 ZMYM1Q5SVZ6 1142 aa7.29□□□□□ -1.24
LRRC49-209ENST00000558271 BICDL1Q6ZP65 573 aa7.29□□□□□ -1.24
LRRC49-209ENST00000558271 SYT9Q86SS6 491 aa7.29□□□□□ -1.24
LRRC49-209ENST00000558271 KRTAP1-3Q8IUG1 177 aa7.29□□□□□ -1.24
LRRC49-209ENST00000558271 ZDHHC1Q8WTX9 485 aa7.29□□□□□ -1.24
LRRC49-209ENST00000558271 SPDYE3A6NKU9 549 aa7.28□□□□□ -1.24
LRRC49-209ENST00000558271 SIN3BO75182 1162 aa7.28□□□□□ -1.24
LRRC49-209ENST00000558271 TEAD4Q15561 434 aa7.28□□□□□ -1.24
LRRC49-209ENST00000558271 L3MBTL2Q969R5 705 aa7.28□□□□□ -1.24
LRRC49-209ENST00000558271 EML1O00423 815 aa7.27□□□□□ -1.25
LRRC49-209ENST00000558271 ABL2P42684 1182 aa7.27□□□□□ -1.25
LRRC49-209ENST00000558271 PRDM6Q9NQX0 595 aa7.27□□□□□ -1.25
LRRC49-209ENST00000558271 PIK3CDO00329 1044 aa7.26□□□□□ -1.25
LRRC49-209ENST00000558271 LZTS3O60299 673 aaPredicted RBP7.26□□□□□ -1.25
LRRC49-209ENST00000558271 NOS2P35228 1153 aa7.26□□□□□ -1.25
LRRC49-209ENST00000558271 PRRT3Q5FWE3 981 aa7.26□□□□□ -1.25
LRRC49-209ENST00000558271 LRRC69Q6ZNQ3 347 aa7.26□□□□□ -1.25
LRRC49-209ENST00000558271 STARD13Q9Y3M8 1113 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms