RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 SCHIP1Q9P0W5 487 aaPredicted RBP6.86□□□□□ -1.31
LRRC28-205ENST00000558248 PHF24Q9UPV7 400 aa6.86□□□□□ -1.31
LRRC28-205ENST00000558248 KIAA1024Q9UPX6 916 aa6.86□□□□□ -1.31
LRRC28-205ENST00000558248 M0R2N6 131 aa6.85□□□□□ -1.31
LRRC28-205ENST00000558248 MSX1P28360 303 aa6.85□□□□□ -1.31
LRRC28-205ENST00000558248 TRIM26Q12899 539 aaPredicted RBP6.85□□□□□ -1.31
LRRC28-205ENST00000558248 DBN1Q16643 649 aa6.85□□□□□ -1.31
LRRC28-205ENST00000558248 GTPBP3Q969Y2 492 aaKnown RBP6.85□□□□□ -1.31
LRRC28-205ENST00000558248 RUBCNLQ9H714 662 aa6.85□□□□□ -1.31
LRRC28-205ENST00000558248 NSFL1CQ9UNZ2 370 aaKnown RBP6.85□□□□□ -1.31
LRRC28-205ENST00000558248 IQSEC3Q9UPP2 1182 aaPredicted RBP6.85□□□□□ -1.31
LRRC28-205ENST00000558248 SEC13P55735 322 aa6.84□□□□□ -1.31
LRRC28-205ENST00000558248 ARSJQ5FYB0 599 aaPredicted RBP6.84□□□□□ -1.31
LRRC28-205ENST00000558248 FIGNL1Q6PIW4 674 aa6.84□□□□□ -1.31
LRRC28-205ENST00000558248 SLC9A9Q8IVB4 645 aa6.84□□□□□ -1.31
LRRC28-205ENST00000558248 CCDC97Q96F63 343 aaPredicted RBP6.84□□□□□ -1.31
LRRC28-205ENST00000558248 ZDHHC3Q9NYG2 299 aa6.84□□□□□ -1.31
LRRC28-205ENST00000558248 ZNF232Q9UNY5 417 aa6.84□□□□□ -1.31
LRRC28-205ENST00000558248 ZBTB7BO15156 539 aaPredicted RBP6.83□□□□□ -1.32
LRRC28-205ENST00000558248 RNFT1Q5M7Z0 435 aa6.83□□□□□ -1.32
LRRC28-205ENST00000558248 TNS4Q8IZW8 715 aa6.83□□□□□ -1.32
LRRC28-205ENST00000558248 CRISPLD1Q9H336 500 aa6.83□□□□□ -1.32
LRRC28-205ENST00000558248 MBIPQ9NS73 344 aa6.83□□□□□ -1.32
LRRC28-205ENST00000558248 GJA3Q9Y6H8 435 aa6.83□□□□□ -1.32
LRRC28-205ENST00000558248 SERTM1A2A2V5 107 aa6.82□□□□□ -1.32
LRRC28-205ENST00000558248 FAM196BA6NMK8 535 aa6.82□□□□□ -1.32
LRRC28-205ENST00000558248 USP17L15C9J2P7 530 aa6.82□□□□□ -1.32
LRRC28-205ENST00000558248 USP17L10C9JJH3 530 aa6.82□□□□□ -1.32
LRRC28-205ENST00000558248 USP17L13C9JLJ4 530 aa6.82□□□□□ -1.32
LRRC28-205ENST00000558248 USP17L12C9JPN9 530 aa6.82□□□□□ -1.32
LRRC28-205ENST00000558248 USP17L11C9JVI0 530 aa6.82□□□□□ -1.32
LRRC28-205ENST00000558248 USP17L21D6R901 530 aa6.82□□□□□ -1.32
LRRC28-205ENST00000558248 USP17L18D6R9N7 530 aa6.82□□□□□ -1.32
LRRC28-205ENST00000558248 USP17L22D6RA61 530 aa6.82□□□□□ -1.32
LRRC28-205ENST00000558248 USP17L17D6RBQ6 530 aa6.82□□□□□ -1.32
LRRC28-205ENST00000558248 USP17L19D6RCP7 530 aa6.82□□□□□ -1.32
LRRC28-205ENST00000558248 USP17L20D6RJB6 530 aa6.82□□□□□ -1.32
LRRC28-205ENST00000558248 GPR25O00155 361 aa6.82□□□□□ -1.32
LRRC28-205ENST00000558248 EPHA4P54764 986 aa6.82□□□□□ -1.32
LRRC28-205ENST00000558248 PSMA6P60900 246 aaKnown RBP6.82□□□□□ -1.32
LRRC28-205ENST00000558248 FOXK2Q01167 660 aa6.82□□□□□ -1.32
LRRC28-205ENST00000558248 KRT76Q01546 638 aa6.82□□□□□ -1.32
LRRC28-205ENST00000558248 SRSF11Q05519 484 aaKnown RBP6.82□□□□□ -1.32
LRRC28-205ENST00000558248 USP17L24Q0WX57 530 aa6.82□□□□□ -1.32
LRRC28-205ENST00000558248 TEAD4Q15561 434 aa6.82□□□□□ -1.32
LRRC28-205ENST00000558248 BICDL1Q6ZP65 573 aa6.82□□□□□ -1.32
LRRC28-205ENST00000558248 SFI1A8K8P3 1242 aa6.81□□□□□ -1.32
LRRC28-205ENST00000558248 MX2P20592 715 aa6.81□□□□□ -1.32
LRRC28-205ENST00000558248 ATP4AP20648 1035 aa6.81□□□□□ -1.32
LRRC28-205ENST00000558248 RFX1P22670 979 aa6.81□□□□□ -1.32
LRRC28-205ENST00000558248 PTK7Q13308 1070 aa6.81□□□□□ -1.32
LRRC28-205ENST00000558248 CFAP70Q5T0N1 1121 aa6.81□□□□□ -1.32
LRRC28-205ENST00000558248 KANK4Q5T7N3 995 aaPredicted RBP6.81□□□□□ -1.32
LRRC28-205ENST00000558248 NLRP8Q86W28 1048 aa6.81□□□□□ -1.32
LRRC28-205ENST00000558248 TSEN2Q8NCE0 465 aaKnown RBP6.81□□□□□ -1.32
LRRC28-205ENST00000558248 L3MBTL2Q969R5 705 aa6.81□□□□□ -1.32
LRRC28-205ENST00000558248 CFHR5Q9BXR6 569 aa6.81□□□□□ -1.32
LRRC28-205ENST00000558248 USP3Q9Y6I4 520 aa6.81□□□□□ -1.32
LRRC28-205ENST00000558248 ADAMTS2O95450 1211 aa6.8□□□□□ -1.32
LRRC28-205ENST00000558248 NOS2P35228 1153 aa6.8□□□□□ -1.32
LRRC28-205ENST00000558248 MAP3K10Q02779 954 aa6.8□□□□□ -1.32
LRRC28-205ENST00000558248 DPYDQ12882 1025 aa6.8□□□□□ -1.32
LRRC28-205ENST00000558248 GAS6Q14393 721 aa6.8□□□□□ -1.32
LRRC28-205ENST00000558248 CRTC2Q53ET0 693 aaPredicted RBP6.8□□□□□ -1.32
LRRC28-205ENST00000558248 TBCELQ5QJ74 424 aa6.8□□□□□ -1.32
LRRC28-205ENST00000558248 ANKMY2Q8IV38 441 aa6.8□□□□□ -1.32
LRRC28-205ENST00000558248 ZNF295-AS1Q8N0V1 137 aa6.8□□□□□ -1.32
LRRC28-205ENST00000558248 SVOPQ8N4V2 548 aa6.8□□□□□ -1.32
LRRC28-205ENST00000558248 HINFPQ9BQA5 517 aa6.8□□□□□ -1.32
LRRC28-205ENST00000558248 TSPAN10Q9H1Z9 355 aaPredicted RBP6.8□□□□□ -1.32
LRRC28-205ENST00000558248 NEUROD4Q9HD90 331 aa6.8□□□□□ -1.32
LRRC28-205ENST00000558248 SERPINA10Q9UK55 444 aa6.8□□□□□ -1.32
LRRC28-205ENST00000558248 ATXN7L1Q9ULK2 861 aaPredicted RBP6.8□□□□□ -1.32
LRRC28-205ENST00000558248 GPC6Q9Y625 555 aaPredicted RBP6.8□□□□□ -1.32
LRRC28-205ENST00000558248 PARP3Q9Y6F1 533 aa6.8□□□□□ -1.32
LRRC28-205ENST00000558248 NESP48681 1621 aa6.79□□□□□ -1.32
LRRC28-205ENST00000558248 A0A1W2PNR3 127 aa6.79□□□□□ -1.32
LRRC28-205ENST00000558248 PPP1R12BO60237 982 aaPredicted RBP6.79□□□□□ -1.32
LRRC28-205ENST00000558248 SLURP2P0DP57 97 aa6.79□□□□□ -1.32
LRRC28-205ENST00000558248 GAS2L2Q8NHY3 880 aa6.79□□□□□ -1.32
LRRC28-205ENST00000558248 MAP2K3P46734 347 aa6.78□□□□□ -1.32
LRRC28-205ENST00000558248 FAM200AQ8TCP9 573 aa6.78□□□□□ -1.32
LRRC28-205ENST00000558248 PCDHGC4Q9Y5F7 938 aa6.78□□□□□ -1.32
LRRC28-205ENST00000558248 IGF1RP08069 1367 aa6.78□□□□□ -1.32
LRRC28-205ENST00000558248 ATXN7O15265 892 aaPredicted RBP6.77□□□□□ -1.33
LRRC28-205ENST00000558248 HIRAP54198 1017 aaPredicted RBP6.77□□□□□ -1.33
LRRC28-205ENST00000558248 RHPN1Q8TCX5 695 aa6.77□□□□□ -1.33
LRRC28-205ENST00000558248 ZDHHC1Q8WTX9 485 aa6.77□□□□□ -1.33
LRRC28-205ENST00000558248 SCG3Q8WXD2 468 aaKnown RBP6.77□□□□□ -1.33
LRRC28-205ENST00000558248 ABHD17AQ96GS6 310 aa6.77□□□□□ -1.33
LRRC28-205ENST00000558248 ENAMQ9NRM1 1142 aa6.77□□□□□ -1.33
LRRC28-205ENST00000558248 EML1O00423 815 aa6.76□□□□□ -1.33
LRRC28-205ENST00000558248 DKK1O94907 266 aa6.76□□□□□ -1.33
LRRC28-205ENST00000558248 THBS1P07996 1170 aa6.76□□□□□ -1.33
LRRC28-205ENST00000558248 BMP4P12644 408 aa6.76□□□□□ -1.33
LRRC28-205ENST00000558248 TXLNAP40222 546 aa6.76□□□□□ -1.33
LRRC28-205ENST00000558248 HIF1AQ16665 826 aa6.76□□□□□ -1.33
LRRC28-205ENST00000558248 C1orf53Q5VUE5 145 aa6.76□□□□□ -1.33
LRRC28-205ENST00000558248 STAG2Q8N3U4 1231 aa6.76□□□□□ -1.33
LRRC28-205ENST00000558248 CHMP7Q8WUX9 453 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms