RNA–Protein interactions for RNA: ENST00000558146.1

SPPL2A-202, Transcript of signal peptide peptidase like 2A, humanhuman

TSL 3

Gene SPPL2A, Length 328 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL2A-202ENST00000558146 GAS2L1Q99501 681 aaPredicted RBP13.15□□□□□ -0.3
SPPL2A-202ENST00000558146 TIMMDC1Q9NPL8 285 aa13.15□□□□□ -0.3
SPPL2A-202ENST00000558146 SERTAD1Q9UHV2 236 aa13.15□□□□□ -0.3
SPPL2A-202ENST00000558146 C4orf17Q53FE4 359 aa13.14□□□□□ -0.31
SPPL2A-202ENST00000558146 WDR44Q5JSH3 913 aa13.14□□□□□ -0.31
SPPL2A-202ENST00000558146 ZNF837Q96EG3 531 aaPredicted RBP13.13□□□□□ -0.31
SPPL2A-202ENST00000558146 CALR3Q96L12 384 aaKnown RBP13.13□□□□□ -0.31
SPPL2A-202ENST00000558146 NUP160Q12769 1436 aa13.13□□□□□ -0.31
SPPL2A-202ENST00000558146 PPARGC1BQ86YN6 1023 aaKnown RBP13.12□□□□□ -0.31
SPPL2A-202ENST00000558146 RHBDD1Q8TEB9 315 aa13.12□□□□□ -0.31
SPPL2A-202ENST00000558146 COL25A1Q9BXS0 654 aaPredicted RBP13.12□□□□□ -0.31
SPPL2A-202ENST00000558146 SHROOM2Q13796 1616 aa13.12□□□□□ -0.31
SPPL2A-202ENST00000558146 RNFT1Q5M7Z0 435 aa13.11□□□□□ -0.31
SPPL2A-202ENST00000558146 TRIM22Q8IYM9 498 aa13.11□□□□□ -0.31
SPPL2A-202ENST00000558146 GPAMQ9HCL2 828 aa13.11□□□□□ -0.31
SPPL2A-202ENST00000558146 KIAA1024Q9UPX6 916 aa13.11□□□□□ -0.31
SPPL2A-202ENST00000558146 LORP23490 312 aaPredicted RBP13.1□□□□□ -0.31
SPPL2A-202ENST00000558146 SMTNP53814 917 aa13.1□□□□□ -0.31
SPPL2A-202ENST00000558146 TRIM50Q86XT4 487 aa13.1□□□□□ -0.31
SPPL2A-202ENST00000558146 MAFBQ9Y5Q3 323 aaPredicted RBP13.1□□□□□ -0.31
SPPL2A-202ENST00000558146 PLA2G4AP47712 749 aa13.09□□□□□ -0.31
SPPL2A-202ENST00000558146 CLDN10P78369 228 aa13.09□□□□□ -0.31
SPPL2A-202ENST00000558146 CNTNAP3BQ96NU0 1288 aa13.09□□□□□ -0.31
SPPL2A-202ENST00000558146 CNTNAP3Q9BZ76 1288 aa13.09□□□□□ -0.31
SPPL2A-202ENST00000558146 ZNF358Q9NW07 568 aa13.09□□□□□ -0.31
SPPL2A-202ENST00000558146 TFIP11Q9UBB9 837 aaKnown RBP13.09□□□□□ -0.31
SPPL2A-202ENST00000558146 A0A1B0GTH6 734 aa13.08□□□□□ -0.32
SPPL2A-202ENST00000558146 DBN1Q16643 649 aa13.08□□□□□ -0.32
SPPL2A-202ENST00000558146 ZSCAN1Q8NBB4 408 aa13.08□□□□□ -0.32
SPPL2A-202ENST00000558146 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.08□□□□□ -0.32
SPPL2A-202ENST00000558146 SLC4A9Q96Q91 983 aa13.08□□□□□ -0.32
SPPL2A-202ENST00000558146 USP3Q9Y6I4 520 aa13.08□□□□□ -0.32
SPPL2A-202ENST00000558146 ADCY10Q96PN6 1610 aa13.07□□□□□ -0.32
SPPL2A-202ENST00000558146 PALM3A6NDB9 673 aaPredicted RBP13.07□□□□□ -0.32
SPPL2A-202ENST00000558146 F11P03951 625 aa13.07□□□□□ -0.32
SPPL2A-202ENST00000558146 TPCN2Q8NHX9 752 aa13.07□□□□□ -0.32
SPPL2A-202ENST00000558146 MKRN1Q9UHC7 482 aaKnown RBP13.07□□□□□ -0.32
SPPL2A-202ENST00000558146 CUX1P39880 1505 aa13.07□□□□□ -0.32
SPPL2A-202ENST00000558146 A6NJY4 79 aa13.06□□□□□ -0.32
SPPL2A-202ENST00000558146 GPR25O00155 361 aa13.06□□□□□ -0.32
SPPL2A-202ENST00000558146 ATP1A2P50993 1020 aa13.06□□□□□ -0.32
SPPL2A-202ENST00000558146 MTFR1Q15390 333 aa13.06□□□□□ -0.32
SPPL2A-202ENST00000558146 PPP1R12CQ9BZL4 782 aa13.06□□□□□ -0.32
SPPL2A-202ENST00000558146 ZNF777Q9ULD5 760 aaPredicted RBP13.06□□□□□ -0.32
SPPL2A-202ENST00000558146 COL17A1Q9UMD9 1497 aaPredicted RBP13.05□□□□□ -0.32
SPPL2A-202ENST00000558146 OGFOD1Q8N543 542 aa13.05□□□□□ -0.32
SPPL2A-202ENST00000558146 GTPBP3Q969Y2 492 aaKnown RBP13.05□□□□□ -0.32
SPPL2A-202ENST00000558146 GMCL1Q96IK5 515 aa13.05□□□□□ -0.32
SPPL2A-202ENST00000558146 DNAAF2Q9NVR5 837 aaKnown RBP13.05□□□□□ -0.32
SPPL2A-202ENST00000558146 STK17AQ9UEE5 414 aa13.05□□□□□ -0.32
SPPL2A-202ENST00000558146 IQSEC3Q9UPP2 1182 aaPredicted RBP13.05□□□□□ -0.32
SPPL2A-202ENST00000558146 H7C1W4 665 aa13.04□□□□□ -0.32
SPPL2A-202ENST00000558146 GAS6Q14393 721 aa13.04□□□□□ -0.32
SPPL2A-202ENST00000558146 ZNF295-AS1Q8N0V1 137 aa13.04□□□□□ -0.32
SPPL2A-202ENST00000558146 ZNF594Q96JF6 807 aaPredicted RBP13.04□□□□□ -0.32
SPPL2A-202ENST00000558146 NUCKS1Q9H1E3 243 aaKnown RBP13.04□□□□□ -0.32
SPPL2A-202ENST00000558146 BACH1O14867 736 aa13.03□□□□□ -0.32
SPPL2A-202ENST00000558146 THBS1P07996 1170 aa13.03□□□□□ -0.32
SPPL2A-202ENST00000558146 MSX1P28360 303 aa13.03□□□□□ -0.32
SPPL2A-202ENST00000558146 CCDC102BQ68D86 513 aa13.03□□□□□ -0.32
SPPL2A-202ENST00000558146 NIFKQ9BYG3 293 aaKnown RBP13.03□□□□□ -0.32
SPPL2A-202ENST00000558146 RUBCNLQ9H714 662 aa13.03□□□□□ -0.32
SPPL2A-202ENST00000558146 ADAMTS12P58397 1594 aa13.03□□□□□ -0.32
SPPL2A-202ENST00000558146 TOP2BQ02880 1626 aa13.02□□□□□ -0.32
SPPL2A-202ENST00000558146 ZBTB7BO15156 539 aaPredicted RBP13.02□□□□□ -0.33
SPPL2A-202ENST00000558146 ABCA5Q8WWZ7 1642 aa13.02□□□□□ -0.33
SPPL2A-202ENST00000558146 EPHA4P54764 986 aa13.01□□□□□ -0.33
SPPL2A-202ENST00000558146 GTF3C3Q9Y5Q9 886 aa13.01□□□□□ -0.33
SPPL2A-202ENST00000558146 SPATA31D1Q6ZQQ2 1576 aa13.01□□□□□ -0.33
SPPL2A-202ENST00000558146 TTBK1Q5TCY1 1321 aaPredicted RBP13□□□□□ -0.33
SPPL2A-202ENST00000558146 CDK2AP1O14519 115 aa13□□□□□ -0.33
SPPL2A-202ENST00000558146 ATP4AP20648 1035 aa13□□□□□ -0.33
SPPL2A-202ENST00000558146 SIX5Q8N196 739 aa13□□□□□ -0.33
SPPL2A-202ENST00000558146 SCHIP1Q9P0W5 487 aaPredicted RBP13□□□□□ -0.33
SPPL2A-202ENST00000558146 CSB-PGBD3P0DP91 1061 aa12.99□□□□□ -0.33
SPPL2A-202ENST00000558146 FOXR1Q6PIV2 292 aa12.99□□□□□ -0.33
SPPL2A-202ENST00000558146 TNS4Q8IZW8 715 aa12.99□□□□□ -0.33
SPPL2A-202ENST00000558146 PGBD3Q8N328 593 aa12.99□□□□□ -0.33
SPPL2A-202ENST00000558146 LARGE2Q8N3Y3 721 aa12.99□□□□□ -0.33
SPPL2A-202ENST00000558146 CABP1Q9NZU7 370 aa12.99□□□□□ -0.33
SPPL2A-202ENST00000558146 ABCA10Q8WWZ4 1543 aa12.98□□□□□ -0.33
SPPL2A-202ENST00000558146 RASA1P20936 1047 aa12.98□□□□□ -0.33
SPPL2A-202ENST00000558146 PPRC1Q5VV67 1664 aaKnown RBP12.98□□□□□ -0.33
SPPL2A-202ENST00000558146 FHAD1B1AJZ9 1412 aa12.97□□□□□ -0.33
SPPL2A-202ENST00000558146 LMOD1P29536 600 aaPredicted RBP12.97□□□□□ -0.33
SPPL2A-202ENST00000558146 FOXK2Q01167 660 aa12.97□□□□□ -0.33
SPPL2A-202ENST00000558146 TBCELQ5QJ74 424 aa12.97□□□□□ -0.33
SPPL2A-202ENST00000558146 SLC9A9Q8IVB4 645 aa12.97□□□□□ -0.33
SPPL2A-202ENST00000558146 TRERF1Q96PN7 1200 aa12.97□□□□□ -0.33
SPPL2A-202ENST00000558146 SFI1A8K8P3 1242 aa12.96□□□□□ -0.33
SPPL2A-202ENST00000558146 DKK1O94907 266 aa12.96□□□□□ -0.33
SPPL2A-202ENST00000558146 CFAP70Q5T0N1 1121 aa12.96□□□□□ -0.33
SPPL2A-202ENST00000558146 AIDAQ96BJ3 306 aa12.96□□□□□ -0.33
SPPL2A-202ENST00000558146 PARP3Q9Y6F1 533 aa12.96□□□□□ -0.33
SPPL2A-202ENST00000558146 NBPF1Q3BBV0 1214 aa12.95□□□□□ -0.34
SPPL2A-202ENST00000558146 CRTC2Q53ET0 693 aaPredicted RBP12.95□□□□□ -0.34
SPPL2A-202ENST00000558146 ZDHHC1Q8WTX9 485 aa12.95□□□□□ -0.34
SPPL2A-202ENST00000558146 CRISPLD1Q9H336 500 aa12.95□□□□□ -0.34
SPPL2A-202ENST00000558146 ADAMTS2O95450 1211 aa12.94□□□□□ -0.34
SPPL2A-202ENST00000558146 SLURP2P0DP57 97 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms