RNA–Protein interactions for RNA: ENST00000558146.1

SPPL2A-202, Transcript of signal peptide peptidase like 2A, humanhuman

TSL 3

Gene SPPL2A, Length 328 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL2A-202ENST00000558146 AEBP2Q6ZN18 517 aaPredicted RBP38.03■■■■□ 3.68
SPPL2A-202ENST00000558146 CHIC1Q5VXU3 224 aa36.77■■■■□ 3.48
SPPL2A-202ENST00000558146 PHF23Q9BUL5 403 aaPredicted RBP32.32■■■□□ 2.76
SPPL2A-202ENST00000558146 SENP3Q9H4L4 574 aaPredicted RBP32.28■■■□□ 2.76
SPPL2A-202ENST00000558146 FOXD1Q16676 465 aa30.01■■■□□ 2.39
SPPL2A-202ENST00000558146 PLPPR3Q6T4P5 718 aa29.7■■■□□ 2.35
SPPL2A-202ENST00000558146 PPP6R1Q9UPN7 881 aa28.62■■■□□ 2.17
SPPL2A-202ENST00000558146 ADRA2BP18089 450 aa28.58■■■□□ 2.17
SPPL2A-202ENST00000558146 PIAS4Q8N2W9 510 aaPredicted RBP28.25■■■□□ 2.11
SPPL2A-202ENST00000558146 MSH5O43196 834 aa27.79■■■□□ 2.04
SPPL2A-202ENST00000558146 PPP4R3CPQ6ZMV5 832 aa26.13■■□□□ 1.77
SPPL2A-202ENST00000558146 SCAF1Q9H7N4 1312 aaKnown RBP26.08■■□□□ 1.77
SPPL2A-202ENST00000558146 MAPK8IP2Q13387 824 aaPredicted RBP26.03■■□□□ 1.76
SPPL2A-202ENST00000558146 POTEDQ86YR6 584 aa25.92■■□□□ 1.74
SPPL2A-202ENST00000558146 DMRT2Q9Y5R5 561 aa25.72■■□□□ 1.71
SPPL2A-202ENST00000558146 CNKSR2Q8WXI2 1034 aa25.46■■□□□ 1.67
SPPL2A-202ENST00000558146 NCBP3Q53F19 620 aaKnown RBP25.32■■□□□ 1.64
SPPL2A-202ENST00000558146 KCNA4P22459 653 aa25.2■■□□□ 1.62
SPPL2A-202ENST00000558146 RNF216Q9NWF9 866 aaPredicted RBP25.05■■□□□ 1.6
SPPL2A-202ENST00000558146 HOXD11P31277 338 aaPredicted RBP25.04■■□□□ 1.6
SPPL2A-202ENST00000558146 NPM3O75607 178 aaKnown RBP25.01■■□□□ 1.59
SPPL2A-202ENST00000558146 DCAF8L1A6NGE4 600 aa24.66■■□□□ 1.54
SPPL2A-202ENST00000558146 DNAJC5BQ9UF47 199 aa24.25■■□□□ 1.47
SPPL2A-202ENST00000558146 SLC4A1APQ9BWU0 796 aaKnown RBP23.91■■□□□ 1.42
SPPL2A-202ENST00000558146 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.88■■□□□ 1.41
SPPL2A-202ENST00000558146 RNF39Q9H2S5 420 aa23.8■■□□□ 1.4
SPPL2A-202ENST00000558146 SLC4A2P04920 1241 aa23.69■■□□□ 1.38
SPPL2A-202ENST00000558146 U3KPZ7 1027 aaPredicted RBP23.5■■□□□ 1.35
SPPL2A-202ENST00000558146 C1QBPQ07021 282 aaKnown RBP23.45■■□□□ 1.34
SPPL2A-202ENST00000558146 CACNB1Q02641 598 aaPredicted RBP23.42■■□□□ 1.34
SPPL2A-202ENST00000558146 FOXD4L1Q9NU39 408 aa23.27■■□□□ 1.32
SPPL2A-202ENST00000558146 ZBTB22O15209 634 aa23.2■■□□□ 1.3
SPPL2A-202ENST00000558146 MYCNP04198 464 aaPredicted RBP23.11■■□□□ 1.29
SPPL2A-202ENST00000558146 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.01■■□□□ 1.27
SPPL2A-202ENST00000558146 HNRNPUL2Q1KMD3 747 aaKnown RBP23.01■■□□□ 1.27
SPPL2A-202ENST00000558146 SPINK5Q9NQ38 1064 aaPredicted RBP22.94■■□□□ 1.26
SPPL2A-202ENST00000558146 SAMD1Q6SPF0 538 aaPredicted RBP22.93■■□□□ 1.26
SPPL2A-202ENST00000558146 EHMT2Q96KQ7 1210 aa22.9■■□□□ 1.26
SPPL2A-202ENST00000558146 CAPN15O75808 1086 aa22.84■■□□□ 1.25
SPPL2A-202ENST00000558146 APLP2Q06481 763 aa22.84■■□□□ 1.25
SPPL2A-202ENST00000558146 CSRNP3Q8WYN3 585 aa22.74■■□□□ 1.23
SPPL2A-202ENST00000558146 TRHP20396 242 aaPredicted RBP22.66■■□□□ 1.22
SPPL2A-202ENST00000558146 ZNF219Q9P2Y4 722 aaPredicted RBP22.63■■□□□ 1.21
SPPL2A-202ENST00000558146 ATF5Q9Y2D1 282 aaPredicted RBP22.54■■□□□ 1.2
SPPL2A-202ENST00000558146 DSG3P32926 999 aa22.53■■□□□ 1.2
SPPL2A-202ENST00000558146 ATXN8OSP0DMR3 200 aa22.43■■□□□ 1.18
SPPL2A-202ENST00000558146 ABCB7O75027 752 aa22.42■■□□□ 1.18
SPPL2A-202ENST00000558146 POLA2Q14181 598 aa22.18■■□□□ 1.14
SPPL2A-202ENST00000558146 ZBTB12Q9Y330 459 aaPredicted RBP21.79■■□□□ 1.08
SPPL2A-202ENST00000558146 FBLN2P98095 1184 aa21.57■■□□□ 1.04
SPPL2A-202ENST00000558146 MKRN4PQ13434 485 aaPredicted RBP21.54■■□□□ 1.04
SPPL2A-202ENST00000558146 OSCARQ8IYS5 282 aa21.53■■□□□ 1.04
SPPL2A-202ENST00000558146 RBM42Q9BTD8 480 aaKnown RBP21.46■■□□□ 1.03
SPPL2A-202ENST00000558146 SPDYE2BA6NHP3 402 aa21.18■□□□□ 0.98
SPPL2A-202ENST00000558146 SPDYE6P0CI01 402 aa21.18■□□□□ 0.98
SPPL2A-202ENST00000558146 SPDYE2Q495Y8 402 aa21.18■□□□□ 0.98
SPPL2A-202ENST00000558146 AKT1S1Q96B36 256 aa21.12■□□□□ 0.97
SPPL2A-202ENST00000558146 ZNF692Q9BU19 519 aaPredicted RBP21.04■□□□□ 0.96
SPPL2A-202ENST00000558146 SSUH2Q9Y2M2 353 aa21.01■□□□□ 0.95
SPPL2A-202ENST00000558146 REM2Q8IYK8 340 aaPredicted RBP20.93■□□□□ 0.94
SPPL2A-202ENST00000558146 SPDYE4A6NLX3 237 aa20.88■□□□□ 0.93
SPPL2A-202ENST00000558146 PABPN1Q86U42 306 aaKnown RBP eCLIP20.78■□□□□ 0.92
SPPL2A-202ENST00000558146 PITPNM1O00562 1244 aa20.74■□□□□ 0.91
SPPL2A-202ENST00000558146 CHRDL2Q6WN34 429 aa20.73■□□□□ 0.91
SPPL2A-202ENST00000558146 SPDYE1Q8NFV5 336 aaPredicted RBP20.64■□□□□ 0.89
SPPL2A-202ENST00000558146 FKBP8Q14318 412 aa20.61■□□□□ 0.89
SPPL2A-202ENST00000558146 CLEC11AQ9Y240 323 aa20.59■□□□□ 0.89
SPPL2A-202ENST00000558146 PROM2Q8N271 834 aa20.47■□□□□ 0.87
SPPL2A-202ENST00000558146 POTEHQ6S545 545 aa20.45■□□□□ 0.86
SPPL2A-202ENST00000558146 PIP4P2Q8N4L2 257 aa20.4■□□□□ 0.86
SPPL2A-202ENST00000558146 FXR2P51116 673 aaKnown RBP eCLIP20.37■□□□□ 0.85
SPPL2A-202ENST00000558146 PRR29P0C7W0 189 aa20.32■□□□□ 0.84
SPPL2A-202ENST00000558146 STAG3Q9UJ98 1225 aa20.3■□□□□ 0.84
SPPL2A-202ENST00000558146 PRKAR2AP13861 404 aaKnown RBP20.19■□□□□ 0.82
SPPL2A-202ENST00000558146 CHADLQ6NUI6 762 aa20.15■□□□□ 0.82
SPPL2A-202ENST00000558146 CREBZFQ9NS37 354 aa20.02■□□□□ 0.8
SPPL2A-202ENST00000558146 FBXO3Q9UK99 471 aa19.9■□□□□ 0.78
SPPL2A-202ENST00000558146 FARP1Q9Y4F1 1045 aaPredicted RBP19.88■□□□□ 0.77
SPPL2A-202ENST00000558146 HAX1O00165 279 aa19.8■□□□□ 0.76
SPPL2A-202ENST00000558146 MIER1Q8N108 512 aa19.79■□□□□ 0.76
SPPL2A-202ENST00000558146 MNX1P50219 401 aaPredicted RBP19.76■□□□□ 0.75
SPPL2A-202ENST00000558146 PLCD3Q8N3E9 789 aa19.76■□□□□ 0.75
SPPL2A-202ENST00000558146 PLEKHG5O94827 1062 aa19.71■□□□□ 0.75
SPPL2A-202ENST00000558146 VASPP50552 380 aaPredicted RBP19.7■□□□□ 0.74
SPPL2A-202ENST00000558146 C19orf67A6NJJ6 358 aa19.69■□□□□ 0.74
SPPL2A-202ENST00000558146 EVX2Q03828 476 aa19.64■□□□□ 0.73
SPPL2A-202ENST00000558146 NPM1P06748 294 aaKnown RBP eCLIP19.63■□□□□ 0.73
SPPL2A-202ENST00000558146 CD44P16070 742 aaKnown RBP19.61■□□□□ 0.73
SPPL2A-202ENST00000558146 ZBTB47Q9UFB7 747 aaPredicted RBP19.53■□□□□ 0.72
SPPL2A-202ENST00000558146 SP7Q8TDD2 431 aaPredicted RBP19.51■□□□□ 0.71
SPPL2A-202ENST00000558146 ZRANB1Q9UGI0 708 aa19.43■□□□□ 0.7
SPPL2A-202ENST00000558146 PAK3O75914 559 aaPredicted RBP19.41■□□□□ 0.7
SPPL2A-202ENST00000558146 KLHL34Q8N239 644 aa19.41■□□□□ 0.7
SPPL2A-202ENST00000558146 IFNLR1Q8IU57 520 aaPredicted RBP19.39■□□□□ 0.69
SPPL2A-202ENST00000558146 RASEFQ8IZ41 740 aa19.39■□□□□ 0.69
SPPL2A-202ENST00000558146 NUBP1P53384 320 aa19.36■□□□□ 0.69
SPPL2A-202ENST00000558146 TSPYL2Q9H2G4 693 aaPredicted RBP19.35■□□□□ 0.69
SPPL2A-202ENST00000558146 ZNF579Q8NAF0 562 aaKnown RBP19.33■□□□□ 0.68
SPPL2A-202ENST00000558146 PHF12Q96QT6 1004 aa19.27■□□□□ 0.68
SPPL2A-202ENST00000558146 GABBR2O75899 941 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms