RNA–Protein interactions for RNA: ENST00000558077.1

ALPK3-202, Transcript of alpha kinase 3, humanhuman

TSL 3

Gene ALPK3, Length 487 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-202ENST00000558077 FMNL2Q96PY5 1086 aa17.96■□□□□ 0.47
ALPK3-202ENST00000558077 MIS18AQ9NYP9 233 aa17.96■□□□□ 0.47
ALPK3-202ENST00000558077 SRP68Q9UHB9 627 aaKnown RBP17.96■□□□□ 0.47
ALPK3-202ENST00000558077 MAPK8IP3Q9UPT6 1336 aa17.96■□□□□ 0.46
ALPK3-202ENST00000558077 NEFMP07197 916 aa17.95■□□□□ 0.46
ALPK3-202ENST00000558077 RFC4P35249 363 aa17.95■□□□□ 0.46
ALPK3-202ENST00000558077 USP42Q9H9J4 1324 aaKnown RBP17.95■□□□□ 0.46
ALPK3-202ENST00000558077 EIF5P55010 431 aaKnown RBP17.94■□□□□ 0.46
ALPK3-202ENST00000558077 RIPK4P57078 832 aa17.94■□□□□ 0.46
ALPK3-202ENST00000558077 NLGN1Q8N2Q7 840 aa17.94■□□□□ 0.46
ALPK3-202ENST00000558077 ZNF784Q8NCA9 323 aaPredicted RBP17.94■□□□□ 0.46
ALPK3-202ENST00000558077 RUNDC1Q96C34 613 aa17.94■□□□□ 0.46
ALPK3-202ENST00000558077 USP16Q9Y5T5 823 aa17.94■□□□□ 0.46
ALPK3-202ENST00000558077 MMP10P09238 476 aa17.93■□□□□ 0.46
ALPK3-202ENST00000558077 FKBP8Q14318 412 aa17.93■□□□□ 0.46
ALPK3-202ENST00000558077 TEX13AQ9BXU3 409 aaPredicted RBP17.93■□□□□ 0.46
ALPK3-202ENST00000558077 BCL2L12Q9HB09 334 aa17.93■□□□□ 0.46
ALPK3-202ENST00000558077 STARD3NLO95772 234 aa17.92■□□□□ 0.46
ALPK3-202ENST00000558077 A1BGP04217 495 aa17.92■□□□□ 0.46
ALPK3-202ENST00000558077 CANXP27824 592 aaKnown RBP17.92■□□□□ 0.46
ALPK3-202ENST00000558077 WDR43Q15061 677 aaKnown RBP eCLIP17.92■□□□□ 0.46
ALPK3-202ENST00000558077 TRIM35Q9UPQ4 493 aa17.92■□□□□ 0.46
ALPK3-202ENST00000558077 RRP7AQ9Y3A4 280 aaKnown RBP17.92■□□□□ 0.46
ALPK3-202ENST00000558077 CD2APQ9Y5K6 639 aa17.92■□□□□ 0.46
ALPK3-202ENST00000558077 COL15A1P39059 1388 aa17.91■□□□□ 0.46
ALPK3-202ENST00000558077 KIF13BQ9NQT8 1826 aa17.91■□□□□ 0.46
ALPK3-202ENST00000558077 KLHL34Q8N239 644 aa17.91■□□□□ 0.46
ALPK3-202ENST00000558077 NARFQ9UHQ1 456 aa17.91■□□□□ 0.46
ALPK3-202ENST00000558077 SNRPA1P09661 255 aaKnown RBP17.9■□□□□ 0.46
ALPK3-202ENST00000558077 TM4SF1P30408 202 aa17.9■□□□□ 0.46
ALPK3-202ENST00000558077 C1QTNF8P60827 252 aa17.9■□□□□ 0.46
ALPK3-202ENST00000558077 EIF4A1P60842 406 aaKnown RBP17.9■□□□□ 0.46
ALPK3-202ENST00000558077 DDR1Q08345 913 aa17.9■□□□□ 0.46
ALPK3-202ENST00000558077 USPL1Q5W0Q7 1092 aa17.9■□□□□ 0.46
ALPK3-202ENST00000558077 KIAA1551Q9HCM1 1747 aa17.89■□□□□ 0.46
ALPK3-202ENST00000558077 PNISRQ8TF01 805 aaKnown RBP17.89■□□□□ 0.45
ALPK3-202ENST00000558077 NBPF26B4DH59 902 aa17.88■□□□□ 0.45
ALPK3-202ENST00000558077 IL6STP40189 918 aaPredicted RBP17.88■□□□□ 0.45
ALPK3-202ENST00000558077 NBPF10Q6P3W6 841 aaKnown RBP17.88■□□□□ 0.45
ALPK3-202ENST00000558077 NBPF15Q8N660 670 aa17.88■□□□□ 0.45
ALPK3-202ENST00000558077 GIGYF1O75420 1035 aaPredicted RBP17.87■□□□□ 0.45
ALPK3-202ENST00000558077 PIP4K2AP48426 406 aaPredicted RBP17.87■□□□□ 0.45
ALPK3-202ENST00000558077 NEUROD2Q15784 382 aa17.87■□□□□ 0.45
ALPK3-202ENST00000558077 LAMB4A4D0S4 1761 aa17.86■□□□□ 0.45
ALPK3-202ENST00000558077 C10orf71Q711Q0 1435 aa17.86■□□□□ 0.45
ALPK3-202ENST00000558077 AFDNP55196 1824 aaKnown RBP17.86■□□□□ 0.45
ALPK3-202ENST00000558077 POLRMTO00411 1230 aaKnown RBP17.85■□□□□ 0.45
ALPK3-202ENST00000558077 APAF1O14727 1248 aa17.85■□□□□ 0.45
ALPK3-202ENST00000558077 ZPR1O75312 459 aa17.85■□□□□ 0.45
ALPK3-202ENST00000558077 LMOD3Q0VAK6 560 aa17.85■□□□□ 0.45
ALPK3-202ENST00000558077 NFIXQ14938 502 aa17.85■□□□□ 0.45
ALPK3-202ENST00000558077 BABAM1Q9NWV8 329 aa17.85■□□□□ 0.45
ALPK3-202ENST00000558077 NRXN2Q9P2S2 1712 aa17.84■□□□□ 0.45
ALPK3-202ENST00000558077 SCN7AQ01118 1682 aa17.84■□□□□ 0.45
ALPK3-202ENST00000558077 CHL1O00533 1208 aa17.84■□□□□ 0.45
ALPK3-202ENST00000558077 ANP32CO43423 234 aa17.84■□□□□ 0.45
ALPK3-202ENST00000558077 YBX3P16989 372 aaKnown RBP eCLIP17.84■□□□□ 0.45
ALPK3-202ENST00000558077 TBC1D2BQ9UPU7 963 aa17.84■□□□□ 0.45
ALPK3-202ENST00000558077 UTRNP46939 3433 aa17.84■□□□□ 0.45
ALPK3-202ENST00000558077 A0A087WZG4 1122 aa17.83■□□□□ 0.44
ALPK3-202ENST00000558077 CAMTA2O94983 1202 aa17.83■□□□□ 0.44
ALPK3-202ENST00000558077 TSPYL4Q9UJ04 414 aa17.83■□□□□ 0.44
ALPK3-202ENST00000558077 PARP3Q9Y6F1 533 aa17.83■□□□□ 0.44
ALPK3-202ENST00000558077 N4BP2Q86UW6 1770 aaPredicted RBP17.83■□□□□ 0.44
ALPK3-202ENST00000558077 PXDNLA1KZ92 1463 aa17.82■□□□□ 0.44
ALPK3-202ENST00000558077 BCORQ6W2J9 1755 aa17.82■□□□□ 0.44
ALPK3-202ENST00000558077 CHD4Q14839 1912 aa17.82■□□□□ 0.44
ALPK3-202ENST00000558077 BRCA1P38398 1863 aaKnown RBP17.8■□□□□ 0.44
ALPK3-202ENST00000558077 ZNF853P0CG23 659 aa17.8■□□□□ 0.44
ALPK3-202ENST00000558077 KCNA3P22001 575 aa17.8■□□□□ 0.44
ALPK3-202ENST00000558077 GPR162Q16538 588 aa17.8■□□□□ 0.44
ALPK3-202ENST00000558077 TBC1D9BQ66K14 1250 aa17.8■□□□□ 0.44
ALPK3-202ENST00000558077 MRS2Q9HD23 443 aa17.8■□□□□ 0.44
ALPK3-202ENST00000558077 GOLGB1Q14789 3259 aaKnown RBP17.8■□□□□ 0.44
ALPK3-202ENST00000558077 TGFB2P61812 414 aa17.79■□□□□ 0.44
ALPK3-202ENST00000558077 KRT24Q2M2I5 525 aa17.79■□□□□ 0.44
ALPK3-202ENST00000558077 LRP10Q7Z4F1 713 aa17.79■□□□□ 0.44
ALPK3-202ENST00000558077 DZIP3Q86Y13 1208 aaKnown RBP17.79■□□□□ 0.44
ALPK3-202ENST00000558077 ZNF330Q9Y3S2 320 aaPredicted RBP17.79■□□□□ 0.44
ALPK3-202ENST00000558077 A0A0G2JLW4 131 aa17.78■□□□□ 0.44
ALPK3-202ENST00000558077 DPEP1P16444 411 aa17.78■□□□□ 0.44
ALPK3-202ENST00000558077 PDIA6Q15084 440 aa17.78■□□□□ 0.44
ALPK3-202ENST00000558077 SERPINB2P05120 415 aa17.77■□□□□ 0.44
ALPK3-202ENST00000558077 CFAP44Q96MT7 982 aa17.77■□□□□ 0.44
ALPK3-202ENST00000558077 BICDL1Q6ZP65 573 aa17.76■□□□□ 0.43
ALPK3-202ENST00000558077 PELP1Q8IZL8 1130 aaKnown RBP17.76■□□□□ 0.43
ALPK3-202ENST00000558077 CEP350Q5VT06 3117 aa17.76■□□□□ 0.43
ALPK3-202ENST00000558077 ANKRD31Q8N7Z5 1873 aa17.75■□□□□ 0.43
ALPK3-202ENST00000558077 WWC3Q9ULE0 1092 aa17.75■□□□□ 0.43
ALPK3-202ENST00000558077 CARMIL3Q8ND23 1372 aa17.75■□□□□ 0.43
ALPK3-202ENST00000558077 NUP98P52948 1817 aa17.75■□□□□ 0.43
ALPK3-202ENST00000558077 ERBB4Q15303 1308 aa17.74■□□□□ 0.43
ALPK3-202ENST00000558077 RGL2O15211 777 aa17.74■□□□□ 0.43
ALPK3-202ENST00000558077 HLFQ16534 295 aa17.74■□□□□ 0.43
ALPK3-202ENST00000558077 PROSER3Q2NL68 480 aa17.74■□□□□ 0.43
ALPK3-202ENST00000558077 CLEC4GQ6UXB4 293 aa17.74■□□□□ 0.43
ALPK3-202ENST00000558077 TTLL7Q6ZT98 887 aa17.74■□□□□ 0.43
ALPK3-202ENST00000558077 MBIPQ9NS73 344 aa17.74■□□□□ 0.43
ALPK3-202ENST00000558077 LAS1LQ9Y4W2 734 aaKnown RBP17.74■□□□□ 0.43
ALPK3-202ENST00000558077 GRIN3BO60391 1043 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms