RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 NRDCO43847 1150 aa12.98□□□□□ -0.33
SEMA4B-204ENST00000558065 ECM2O94769 699 aaPredicted RBP12.98□□□□□ -0.33
SEMA4B-204ENST00000558065 MAGEA8P43361 318 aa12.98□□□□□ -0.33
SEMA4B-204ENST00000558065 GBP6Q6ZN66 633 aa12.98□□□□□ -0.33
SEMA4B-204ENST00000558065 FGD5Q6ZNL6 1462 aa12.98□□□□□ -0.33
SEMA4B-204ENST00000558065 NPHP1O15259 732 aa12.98□□□□□ -0.33
SEMA4B-204ENST00000558065 A0A087WUV0 522 aaPredicted RBP12.98□□□□□ -0.33
SEMA4B-204ENST00000558065 ICA1Q05084 483 aa12.98□□□□□ -0.33
SEMA4B-204ENST00000558065 ZRSR1Q15695 479 aaKnown RBP12.98□□□□□ -0.33
SEMA4B-204ENST00000558065 NYAP1Q6ZVC0 841 aa12.98□□□□□ -0.33
SEMA4B-204ENST00000558065 DRAXINQ8NBI3 349 aaPredicted RBP12.98□□□□□ -0.33
SEMA4B-204ENST00000558065 LRRN4CLQ8ND94 238 aa12.98□□□□□ -0.33
SEMA4B-204ENST00000558065 MICAL1Q8TDZ2 1067 aa12.98□□□□□ -0.33
SEMA4B-204ENST00000558065 BAG1Q99933 345 aaPredicted RBP12.98□□□□□ -0.33
SEMA4B-204ENST00000558065 VEZTQ9HBM0 779 aa12.98□□□□□ -0.33
SEMA4B-204ENST00000558065 PHF8Q9UPP1 1060 aa12.98□□□□□ -0.33
SEMA4B-204ENST00000558065 GCC2Q8IWJ2 1684 aa12.98□□□□□ -0.33
SEMA4B-204ENST00000558065 NEFHP12036 1026 aa12.97□□□□□ -0.33
SEMA4B-204ENST00000558065 NEDD9Q14511 834 aa12.97□□□□□ -0.33
SEMA4B-204ENST00000558065 LEKR1Q6ZMV7 388 aa12.97□□□□□ -0.33
SEMA4B-204ENST00000558065 SCAF11Q99590 1463 aaKnown RBP12.97□□□□□ -0.33
SEMA4B-204ENST00000558065 SCRN1Q12765 414 aa12.97□□□□□ -0.33
SEMA4B-204ENST00000558065 HSP90AB4PQ58FF6 505 aa12.97□□□□□ -0.33
SEMA4B-204ENST00000558065 CTCFLQ8NI51 663 aaPredicted RBP12.97□□□□□ -0.33
SEMA4B-204ENST00000558065 N4BP2L2Q92802 583 aaPredicted RBP12.97□□□□□ -0.33
SEMA4B-204ENST00000558065 SYAP1Q96A49 352 aaPredicted RBP12.97□□□□□ -0.33
SEMA4B-204ENST00000558065 GPTP24298 496 aa12.97□□□□□ -0.33
SEMA4B-204ENST00000558065 SMC1AQ14683 1233 aaKnown RBP12.97□□□□□ -0.33
SEMA4B-204ENST00000558065 JPH2Q9BR39 696 aaPredicted RBP12.97□□□□□ -0.33
SEMA4B-204ENST00000558065 CFDP1Q9UEE9 299 aaPredicted RBP12.97□□□□□ -0.33
SEMA4B-204ENST00000558065 MBD5Q9P267 1494 aa12.97□□□□□ -0.33
SEMA4B-204ENST00000558065 KIF14Q15058 1648 aa12.96□□□□□ -0.33
SEMA4B-204ENST00000558065 TBC1D8O95759 1140 aa12.96□□□□□ -0.33
SEMA4B-204ENST00000558065 CRYMQ14894 314 aa12.96□□□□□ -0.33
SEMA4B-204ENST00000558065 NFXL1Q6ZNB6 911 aa12.96□□□□□ -0.33
SEMA4B-204ENST00000558065 PROCA1Q8NCQ7 364 aaPredicted RBP12.96□□□□□ -0.33
SEMA4B-204ENST00000558065 IRX2Q9BZI1 471 aaPredicted RBP12.96□□□□□ -0.33
SEMA4B-204ENST00000558065 ATP10AO60312 1499 aa12.96□□□□□ -0.33
SEMA4B-204ENST00000558065 ATP8B1O43520 1251 aa12.96□□□□□ -0.33
SEMA4B-204ENST00000558065 TPD52L1Q16890 204 aaPredicted RBP12.96□□□□□ -0.33
SEMA4B-204ENST00000558065 MSL3Q8N5Y2 521 aaKnown RBP12.96□□□□□ -0.33
SEMA4B-204ENST00000558065 AMOTQ4VCS5 1084 aa12.96□□□□□ -0.34
SEMA4B-204ENST00000558065 TRAK1Q9UPV9 953 aa12.96□□□□□ -0.34
SEMA4B-204ENST00000558065 POLA1P09884 1462 aaPredicted RBP12.95□□□□□ -0.34
SEMA4B-204ENST00000558065 TOP2BQ02880 1626 aa12.95□□□□□ -0.34
SEMA4B-204ENST00000558065 ANKRD30AQ9BXX3 1397 aa12.95□□□□□ -0.34
SEMA4B-204ENST00000558065 SNX1Q13596 522 aa12.95□□□□□ -0.34
SEMA4B-204ENST00000558065 KDM6BO15054 1643 aa12.95□□□□□ -0.34
SEMA4B-204ENST00000558065 TSPY4P0CV99 314 aa12.95□□□□□ -0.34
SEMA4B-204ENST00000558065 TSPY10P0CW01 314 aa12.95□□□□□ -0.34
SEMA4B-204ENST00000558065 CCDC30Q5VVM6 783 aa12.95□□□□□ -0.34
SEMA4B-204ENST00000558065 PARD3BQ8TEW8 1205 aa12.95□□□□□ -0.34
SEMA4B-204ENST00000558065 FGD6Q6ZV73 1430 aa12.95□□□□□ -0.34
SEMA4B-204ENST00000558065 TCHHQ07283 1943 aa12.95□□□□□ -0.34
SEMA4B-204ENST00000558065 GPRASP1Q5JY77 1395 aa12.95□□□□□ -0.34
SEMA4B-204ENST00000558065 SNUPNO95149 360 aaKnown RBP12.95□□□□□ -0.34
SEMA4B-204ENST00000558065 NCAPG2Q86XI2 1143 aa12.95□□□□□ -0.34
SEMA4B-204ENST00000558065 RWDD1Q9H446 243 aaPredicted RBP12.95□□□□□ -0.34
SEMA4B-204ENST00000558065 SPATS2LQ9NUQ6 558 aaKnown RBP12.95□□□□□ -0.34
SEMA4B-204ENST00000558065 LMCD1Q9NZU5 365 aa12.95□□□□□ -0.34
SEMA4B-204ENST00000558065 IL16Q14005 1332 aa12.94□□□□□ -0.34
SEMA4B-204ENST00000558065 SEC31AO94979 1220 aaKnown RBP12.94□□□□□ -0.34
SEMA4B-204ENST00000558065 TMCO3Q6UWJ1 677 aa12.94□□□□□ -0.34
SEMA4B-204ENST00000558065 ZGPATQ8N5A5 531 aaKnown RBP12.94□□□□□ -0.34
SEMA4B-204ENST00000558065 ADAMTS8Q9UP79 889 aa12.94□□□□□ -0.34
SEMA4B-204ENST00000558065 PLB1Q6P1J6 1458 aa12.94□□□□□ -0.34
SEMA4B-204ENST00000558065 GOLGA6CA6NDK9 693 aa12.94□□□□□ -0.34
SEMA4B-204ENST00000558065 GOLGA6BA6NDN3 693 aa12.94□□□□□ -0.34
SEMA4B-204ENST00000558065 USP27XA6NNY8 438 aa12.94□□□□□ -0.34
SEMA4B-204ENST00000558065 EIF3JO75822 258 aaKnown RBP12.94□□□□□ -0.34
SEMA4B-204ENST00000558065 GOLGA6DP0CG33 693 aa12.94□□□□□ -0.34
SEMA4B-204ENST00000558065 WDR43Q15061 677 aaKnown RBP eCLIP12.94□□□□□ -0.34
SEMA4B-204ENST00000558065 ARMC2Q8NEN0 867 aa12.94□□□□□ -0.34
SEMA4B-204ENST00000558065 FUCA2Q9BTY2 467 aa12.94□□□□□ -0.34
SEMA4B-204ENST00000558065 MMTAG2Q9BU76 263 aaKnown RBP12.94□□□□□ -0.34
SEMA4B-204ENST00000558065 GOLGA6AQ9NYA3 693 aa12.94□□□□□ -0.34
SEMA4B-204ENST00000558065 BLOC1S6Q9UL45 172 aa12.94□□□□□ -0.34
SEMA4B-204ENST00000558065 TBC1D2BQ9UPU7 963 aa12.94□□□□□ -0.34
SEMA4B-204ENST00000558065 SETD1BQ9UPS6 1966 aaKnown RBP12.94□□□□□ -0.34
SEMA4B-204ENST00000558065 USP8P40818 1118 aa12.93□□□□□ -0.34
SEMA4B-204ENST00000558065 MRPL12P52815 198 aaKnown RBP12.93□□□□□ -0.34
SEMA4B-204ENST00000558065 FOXD4L6Q3SYB3 417 aaPredicted RBP12.93□□□□□ -0.34
SEMA4B-204ENST00000558065 ZSCAN25Q6NSZ9 544 aa12.93□□□□□ -0.34
SEMA4B-204ENST00000558065 FOXD4L3Q6VB84 417 aaPredicted RBP12.93□□□□□ -0.34
SEMA4B-204ENST00000558065 ZNF396Q96N95 335 aaPredicted RBP12.93□□□□□ -0.34
SEMA4B-204ENST00000558065 L2HGDHQ9H9P8 463 aa12.93□□□□□ -0.34
SEMA4B-204ENST00000558065 PYGLP06737 847 aa12.93□□□□□ -0.34
SEMA4B-204ENST00000558065 FBXW10Q5XX13 1052 aa12.93□□□□□ -0.34
SEMA4B-204ENST00000558065 ERC1Q8IUD2 1116 aa12.93□□□□□ -0.34
SEMA4B-204ENST00000558065 MKRN1Q9UHC7 482 aaKnown RBP12.93□□□□□ -0.34
SEMA4B-204ENST00000558065 NESP48681 1621 aa12.93□□□□□ -0.34
SEMA4B-204ENST00000558065 PLCB2Q00722 1185 aa12.93□□□□□ -0.34
SEMA4B-204ENST00000558065 PDCD2Q16342 344 aaPredicted RBP12.93□□□□□ -0.34
SEMA4B-204ENST00000558065 ACRBPQ8NEB7 543 aa12.93□□□□□ -0.34
SEMA4B-204ENST00000558065 CARD11Q9BXL7 1154 aa12.93□□□□□ -0.34
SEMA4B-204ENST00000558065 PDS5BQ9NTI5 1447 aa12.92□□□□□ -0.34
SEMA4B-204ENST00000558065 H3BQF6 201 aa12.92□□□□□ -0.34
SEMA4B-204ENST00000558065 ERLIN2O94905 339 aa12.92□□□□□ -0.34
SEMA4B-204ENST00000558065 ARHGAP29Q52LW3 1261 aa12.92□□□□□ -0.34
SEMA4B-204ENST00000558065 PICK1Q9NRD5 415 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 181.5 ms