RNA–Protein interactions for RNA: ENST00000557440.1

LINC00639-205, long intergenic non-protein coding RNA 639, humanhuman

TSL 2

Gene LINC00639, Length 3,644 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00639-205ENST00000557440 EDC3Q96F86 508 aaKnown RBP16.59■□□□□ 0.25
LINC00639-205ENST00000557440 USP6P35125 1406 aa16.59■□□□□ 0.25
LINC00639-205ENST00000557440 AATKQ6ZMQ8 1374 aa16.59■□□□□ 0.25
LINC00639-205ENST00000557440 SOS1Q07889 1333 aaPredicted RBP16.59■□□□□ 0.25
LINC00639-205ENST00000557440 TTC21AQ8NDW8 1320 aa16.59■□□□□ 0.25
LINC00639-205ENST00000557440 ZKSCAN1P17029 563 aaPredicted RBP16.59■□□□□ 0.25
LINC00639-205ENST00000557440 ARHGEF28Q8N1W1 1705 aaKnown RBP16.59■□□□□ 0.25
LINC00639-205ENST00000557440 BRPF1P55201 1214 aaPredicted RBP16.58■□□□□ 0.25
LINC00639-205ENST00000557440 STRN4Q9NRL3 753 aa16.58■□□□□ 0.25
LINC00639-205ENST00000557440 TBX22Q9Y458 520 aa16.58■□□□□ 0.25
LINC00639-205ENST00000557440 PTMSP20962 102 aa16.58■□□□□ 0.24
LINC00639-205ENST00000557440 NFATC2IPQ8NCF5 419 aa16.58■□□□□ 0.24
LINC00639-205ENST00000557440 PKNOX2Q96KN3 472 aa16.58■□□□□ 0.24
LINC00639-205ENST00000557440 NSFL1CQ9UNZ2 370 aaKnown RBP16.58■□□□□ 0.24
LINC00639-205ENST00000557440 R3HCC1Q9Y3T6 440 aaKnown RBP16.58■□□□□ 0.24
LINC00639-205ENST00000557440 CPSF1Q10570 1443 aaKnown RBP16.58■□□□□ 0.24
LINC00639-205ENST00000557440 MYO5BQ9ULV0 1848 aa16.58■□□□□ 0.24
LINC00639-205ENST00000557440 SBNO1A3KN83 1393 aa16.57■□□□□ 0.24
LINC00639-205ENST00000557440 KAT6BQ8WYB5 2073 aa16.57■□□□□ 0.24
LINC00639-205ENST00000557440 RBM10P98175 930 aaKnown RBP16.57■□□□□ 0.24
LINC00639-205ENST00000557440 DDX58O95786 925 aaKnown RBP16.57■□□□□ 0.24
LINC00639-205ENST00000557440 GORABQ5T7V8 394 aa16.57■□□□□ 0.24
LINC00639-205ENST00000557440 SYTL4Q96C24 671 aaPredicted RBP16.57■□□□□ 0.24
LINC00639-205ENST00000557440 CFAP74Q9C0B2 1584 aa16.57■□□□□ 0.24
LINC00639-205ENST00000557440 KLHL40Q2TBA0 621 aa16.57■□□□□ 0.24
LINC00639-205ENST00000557440 FAM173BQ6P4H8 233 aa16.57■□□□□ 0.24
LINC00639-205ENST00000557440 IL25Q9H293 177 aa16.57■□□□□ 0.24
LINC00639-205ENST00000557440 CWC22Q9HCG8 908 aaKnown RBP16.57■□□□□ 0.24
LINC00639-205ENST00000557440 PTCH1Q13635 1447 aa16.57■□□□□ 0.24
LINC00639-205ENST00000557440 MAP3K5Q99683 1374 aa16.56■□□□□ 0.24
LINC00639-205ENST00000557440 LRRC2Q9BYS8 371 aa16.56■□□□□ 0.24
LINC00639-205ENST00000557440 DBF4Q9UBU7 674 aaPredicted RBP16.56■□□□□ 0.24
LINC00639-205ENST00000557440 FAM177BA6PVY3 158 aa16.56■□□□□ 0.24
LINC00639-205ENST00000557440 ATF3P18847 181 aa16.56■□□□□ 0.24
LINC00639-205ENST00000557440 DDX11Q96FC9 970 aa16.56■□□□□ 0.24
LINC00639-205ENST00000557440 KRT28Q7Z3Y7 464 aa16.55■□□□□ 0.24
LINC00639-205ENST00000557440 COPS6Q7L5N1 327 aa16.55■□□□□ 0.24
LINC00639-205ENST00000557440 UBE3BQ7Z3V4 1068 aa16.55■□□□□ 0.24
LINC00639-205ENST00000557440 DRC7Q8IY82 874 aa16.55■□□□□ 0.24
LINC00639-205ENST00000557440 RUFY2Q8WXA3 655 aa16.55■□□□□ 0.24
LINC00639-205ENST00000557440 ZNF830Q96NB3 372 aaPredicted RBP16.55■□□□□ 0.24
LINC00639-205ENST00000557440 RBSNQ9H1K0 784 aa16.55■□□□□ 0.24
LINC00639-205ENST00000557440 CDK12Q9NYV4 1490 aaPredicted RBP16.55■□□□□ 0.24
LINC00639-205ENST00000557440 MAP2P11137 1827 aaKnown RBP16.54■□□□□ 0.24
LINC00639-205ENST00000557440 GADD45BO75293 160 aaPredicted RBP16.54■□□□□ 0.24
LINC00639-205ENST00000557440 CAMK4Q16566 473 aa16.54■□□□□ 0.24
LINC00639-205ENST00000557440 CNPY2Q9Y2B0 182 aa16.54■□□□□ 0.24
LINC00639-205ENST00000557440 FAM13BQ9NYF5 915 aa16.54■□□□□ 0.24
LINC00639-205ENST00000557440 EIF4A1P60842 406 aaKnown RBP16.53■□□□□ 0.24
LINC00639-205ENST00000557440 SYAP1Q96A49 352 aaPredicted RBP16.53■□□□□ 0.24
LINC00639-205ENST00000557440 TFIP11Q9UBB9 837 aaKnown RBP16.53■□□□□ 0.24
LINC00639-205ENST00000557440 HSP90AB4PQ58FF6 505 aa16.53■□□□□ 0.24
LINC00639-205ENST00000557440 RASEFQ8IZ41 740 aa16.53■□□□□ 0.24
LINC00639-205ENST00000557440 XAGE3Q8WTP9 111 aa16.53■□□□□ 0.24
LINC00639-205ENST00000557440 PDRG1Q9NUG6 133 aa16.53■□□□□ 0.24
LINC00639-205ENST00000557440 LMBRD1Q9NUN5 540 aa16.53■□□□□ 0.24
LINC00639-205ENST00000557440 IGSF1Q8N6C5 1336 aa16.53■□□□□ 0.24
LINC00639-205ENST00000557440 AK2P54819 239 aa16.53■□□□□ 0.24
LINC00639-205ENST00000557440 SPC24Q8NBT2 197 aa16.53■□□□□ 0.24
LINC00639-205ENST00000557440 FAM227BQ96M60 508 aa16.53■□□□□ 0.24
LINC00639-205ENST00000557440 IP6K1Q92551 441 aa16.52■□□□□ 0.24
LINC00639-205ENST00000557440 TMEM63CQ9P1W3 806 aa16.52■□□□□ 0.24
LINC00639-205ENST00000557440 RAB11FIP3O75154 756 aa16.52■□□□□ 0.24
LINC00639-205ENST00000557440 TAF7LQ5H9L4 462 aa16.52■□□□□ 0.24
LINC00639-205ENST00000557440 TMEM131LA2VDJ0 1609 aa16.52■□□□□ 0.24
LINC00639-205ENST00000557440 CLTCQ00610 1675 aaKnown RBP16.52■□□□□ 0.23
LINC00639-205ENST00000557440 FSD2A1L4K1 749 aa16.51■□□□□ 0.23
LINC00639-205ENST00000557440 GLRX3O76003 335 aaKnown RBP16.51■□□□□ 0.23
LINC00639-205ENST00000557440 ZBTB3Q9H5J0 574 aa16.51■□□□□ 0.23
LINC00639-205ENST00000557440 BICC1Q9H694 974 aaKnown RBP16.51■□□□□ 0.23
LINC00639-205ENST00000557440 CYP46A1Q9Y6A2 500 aa16.51■□□□□ 0.23
LINC00639-205ENST00000557440 TATP17735 454 aaPredicted RBP16.51■□□□□ 0.23
LINC00639-205ENST00000557440 GPT2Q8TD30 523 aa16.51■□□□□ 0.23
LINC00639-205ENST00000557440 ECHDC1Q9NTX5 307 aa16.51■□□□□ 0.23
LINC00639-205ENST00000557440 KIAA0232Q92628 1395 aa16.51■□□□□ 0.23
LINC00639-205ENST00000557440 USP48Q86UV5 1035 aa16.51■□□□□ 0.23
LINC00639-205ENST00000557440 KCNH5Q8NCM2 988 aa16.51■□□□□ 0.23
LINC00639-205ENST00000557440 DDX46Q7L014 1031 aaKnown RBP16.5■□□□□ 0.23
LINC00639-205ENST00000557440 STK11IPQ8N1F8 1099 aa16.5■□□□□ 0.23
LINC00639-205ENST00000557440 CABP4P57796 275 aa16.5■□□□□ 0.23
LINC00639-205ENST00000557440 LARP1BQ659C4 914 aaKnown RBP16.5■□□□□ 0.23
LINC00639-205ENST00000557440 RAB11FIP4Q86YS3 637 aa16.5■□□□□ 0.23
LINC00639-205ENST00000557440 USP25Q9UHP3 1055 aa16.5■□□□□ 0.23
LINC00639-205ENST00000557440 ERBB4Q15303 1308 aa16.5■□□□□ 0.23
LINC00639-205ENST00000557440 H3BQV1 296 aa16.5■□□□□ 0.23
LINC00639-205ENST00000557440 CCDC173Q0VFZ6 552 aa16.5■□□□□ 0.23
LINC00639-205ENST00000557440 HSP90AA2PQ14568 343 aaPredicted RBP16.5■□□□□ 0.23
LINC00639-205ENST00000557440 IFFO2Q5TF58 517 aa16.5■□□□□ 0.23
LINC00639-205ENST00000557440 SNRKQ9NRH2 765 aa16.5■□□□□ 0.23
LINC00639-205ENST00000557440 PTH1RQ03431 593 aa16.49■□□□□ 0.23
LINC00639-205ENST00000557440 AXIN2Q9Y2T1 843 aa16.49■□□□□ 0.23
LINC00639-205ENST00000557440 PREX1Q8TCU6 1659 aa16.49■□□□□ 0.23
LINC00639-205ENST00000557440 A0A087WZG4 1122 aa16.49■□□□□ 0.23
LINC00639-205ENST00000557440 MCM2P49736 904 aa16.49■□□□□ 0.23
LINC00639-205ENST00000557440 GIMAP6Q6P9H5 292 aa16.49■□□□□ 0.23
LINC00639-205ENST00000557440 TOM1L2Q6ZVM7 507 aa16.49■□□□□ 0.23
LINC00639-205ENST00000557440 TLR7Q9NYK1 1049 aaKnown RBP16.49■□□□□ 0.23
LINC00639-205ENST00000557440 AK9Q5TCS8 1911 aa16.49■□□□□ 0.23
LINC00639-205ENST00000557440 RNMTO43148 476 aaKnown RBP16.49■□□□□ 0.23
LINC00639-205ENST00000557440 GJB2P29033 226 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms